RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 ENC1O14682 589 aa20.75■□□□□ 0.91
VARS-218ENST00000459667 TOP3BO95985 862 aaKnown RBP20.75■□□□□ 0.91
VARS-218ENST00000459667 PTMAP06454 111 aaKnown RBP20.75■□□□□ 0.91
VARS-218ENST00000459667 ZNF30P17039 623 aa20.75■□□□□ 0.91
VARS-218ENST00000459667 CCZ1BP86790 482 aa20.75■□□□□ 0.91
VARS-218ENST00000459667 CCZ1P86791 482 aaPredicted RBP20.75■□□□□ 0.91
VARS-218ENST00000459667 SHC2P98077 582 aa20.75■□□□□ 0.91
VARS-218ENST00000459667 OTUD4Q01804 1114 aaKnown RBP20.75■□□□□ 0.91
VARS-218ENST00000459667 WASHC5Q12768 1159 aa20.75■□□□□ 0.91
VARS-218ENST00000459667 XRCC4Q13426 336 aa20.75■□□□□ 0.91
VARS-218ENST00000459667 HS1BP3Q53T59 392 aa20.75■□□□□ 0.91
VARS-218ENST00000459667 PHACTR4Q8IZ21 702 aa20.75■□□□□ 0.91
VARS-218ENST00000459667 RBFAQ8N0V3 343 aa20.75■□□□□ 0.91
VARS-218ENST00000459667 CBARPQ8N350 705 aaPredicted RBP20.75■□□□□ 0.91
VARS-218ENST00000459667 OR4C6Q8NH72 309 aa20.75■□□□□ 0.91
VARS-218ENST00000459667 ACTL9Q8TC94 416 aa20.75■□□□□ 0.91
VARS-218ENST00000459667 BTN2A2Q8WVV5 523 aa20.75■□□□□ 0.91
VARS-218ENST00000459667 HTR3CQ8WXA8 447 aa20.75■□□□□ 0.91
VARS-218ENST00000459667 ADGRE3Q9BY15 652 aa20.75■□□□□ 0.91
VARS-218ENST00000459667 KLHL8Q9P2G9 620 aaPredicted RBP20.75■□□□□ 0.91
VARS-218ENST00000459667 APOBEC3BQ9UH17 382 aaKnown RBP20.75■□□□□ 0.91
VARS-218ENST00000459667 PNMA8BQ9ULN7 279 aaPredicted RBP20.75■□□□□ 0.91
VARS-218ENST00000459667 ARID1BQ8NFD5 2236 aaPredicted RBP20.74■□□□□ 0.91
VARS-218ENST00000459667 NEMP2A6NFY4 417 aa20.74■□□□□ 0.91
VARS-218ENST00000459667 H7C0C1 242 aa20.74■□□□□ 0.91
VARS-218ENST00000459667 CACNB4O00305 520 aaPredicted RBP20.74■□□□□ 0.91
VARS-218ENST00000459667 TRIM38O00635 465 aa20.74■□□□□ 0.91
VARS-218ENST00000459667 DDX3YO15523 660 aaKnown RBP20.74■□□□□ 0.91
VARS-218ENST00000459667 HYAL3O43820 417 aaPredicted RBP20.74■□□□□ 0.91
VARS-218ENST00000459667 ALPPL2P10696 532 aa20.74■□□□□ 0.91
VARS-218ENST00000459667 ATP5OP48047 213 aa20.74■□□□□ 0.91
VARS-218ENST00000459667 KIAA1024LP59773 190 aa20.74■□□□□ 0.91
VARS-218ENST00000459667 PPARDQ03181 441 aa20.74■□□□□ 0.91
VARS-218ENST00000459667 ZNF211Q13398 564 aaPredicted RBP20.74■□□□□ 0.91
VARS-218ENST00000459667 SLC14A2Q15849 920 aa20.74■□□□□ 0.91
VARS-218ENST00000459667 PCSK7Q16549 785 aa20.74■□□□□ 0.91
VARS-218ENST00000459667 FAXCQ5TGI0 409 aa20.74■□□□□ 0.91
VARS-218ENST00000459667 PNCKQ6P2M8 343 aa20.74■□□□□ 0.91
VARS-218ENST00000459667 Q6ZVL8 140 aa20.74■□□□□ 0.91
VARS-218ENST00000459667 PELI3Q8N2H9 469 aa20.74■□□□□ 0.91
VARS-218ENST00000459667 CHCHD4Q8N4Q1 142 aa20.74■□□□□ 0.91
VARS-218ENST00000459667 ATL2Q8NHH9 583 aa20.74■□□□□ 0.91
VARS-218ENST00000459667 SPATA22Q8NHS9 363 aa20.74■□□□□ 0.91
VARS-218ENST00000459667 UBE2Q2Q8WVN8 375 aa20.74■□□□□ 0.91
VARS-218ENST00000459667 ADAMTS14Q8WXS8 1223 aa20.74■□□□□ 0.91
VARS-218ENST00000459667 FUBP1Q96AE4 644 aaKnown RBP20.74■□□□□ 0.91
VARS-218ENST00000459667 WDR92Q96MX6 357 aa20.74■□□□□ 0.91
VARS-218ENST00000459667 VAT1Q99536 393 aa20.74■□□□□ 0.91
VARS-218ENST00000459667 SLC13A1Q9BZW2 595 aa20.74■□□□□ 0.91
VARS-218ENST00000459667 TCEAL2Q9H3H9 227 aaPredicted RBP20.74■□□□□ 0.91
VARS-218ENST00000459667 WDR26Q9H7D7 661 aa20.74■□□□□ 0.91
VARS-218ENST00000459667 NLGN3Q9NZ94 848 aa20.74■□□□□ 0.91
VARS-218ENST00000459667 SPASTQ9UBP0 616 aa20.74■□□□□ 0.91
VARS-218ENST00000459667 WASF3Q9UPY6 502 aa20.74■□□□□ 0.91
VARS-218ENST00000459667 K7ESM1 405 aa20.73■□□□□ 0.91
VARS-218ENST00000459667 SCAMP1O15126 338 aa20.73■□□□□ 0.91
VARS-218ENST00000459667 AQP9O43315 295 aa20.73■□□□□ 0.91
VARS-218ENST00000459667 SIGLEC6O43699 453 aa20.73■□□□□ 0.91
VARS-218ENST00000459667 TJP3O95049 919 aa20.73■□□□□ 0.91
VARS-218ENST00000459667 MT-CYBP00156 380 aaPredicted RBP20.73■□□□□ 0.91
VARS-218ENST00000459667 C1SP09871 688 aa20.73■□□□□ 0.91
VARS-218ENST00000459667 GIMD1P0DJR0 217 aa20.73■□□□□ 0.91
VARS-218ENST00000459667 TSHRP16473 764 aa20.73■□□□□ 0.91
VARS-218ENST00000459667 NFKB1P19838 968 aa20.73■□□□□ 0.91
VARS-218ENST00000459667 SPINK2P20155 84 aa20.73■□□□□ 0.91
VARS-218ENST00000459667 CD68P34810 354 aaPredicted RBP20.73■□□□□ 0.91
VARS-218ENST00000459667 TRIM23P36406 574 aa20.73■□□□□ 0.91
VARS-218ENST00000459667 DNAJC3Q13217 504 aa20.73■□□□□ 0.91
VARS-218ENST00000459667 GALNT3Q14435 633 aa20.73■□□□□ 0.91
VARS-218ENST00000459667 QPCTQ16769 361 aa20.73■□□□□ 0.91
VARS-218ENST00000459667 CCDC157Q569K6 752 aa20.73■□□□□ 0.91
VARS-218ENST00000459667 ENPP7Q6UWV6 458 aa20.73■□□□□ 0.91
VARS-218ENST00000459667 KDELC2Q7Z4H8 507 aa20.73■□□□□ 0.91
VARS-218ENST00000459667 TECPR1Q7Z6L1 1165 aa20.73■□□□□ 0.91
VARS-218ENST00000459667 RAB44Q7Z6P3 723 aaPredicted RBP20.73■□□□□ 0.91
VARS-218ENST00000459667 ZNF567Q8N184 647 aa20.73■□□□□ 0.91
VARS-218ENST00000459667 LMX1AQ8TE12 382 aa20.73■□□□□ 0.91
VARS-218ENST00000459667 TADA1Q96BN2 335 aa20.73■□□□□ 0.91
VARS-218ENST00000459667 HES6Q96HZ4 224 aa20.73■□□□□ 0.91
VARS-218ENST00000459667 TRIB3Q96RU7 358 aa20.73■□□□□ 0.91
VARS-218ENST00000459667 LYSMD1Q96S90 227 aa20.73■□□□□ 0.91
VARS-218ENST00000459667 MLPHQ9BV36 600 aaPredicted RBP20.73■□□□□ 0.91
VARS-218ENST00000459667 SCNM1Q9BWG6 230 aa20.73■□□□□ 0.91
VARS-218ENST00000459667 KLQ9UEF7 1012 aa20.73■□□□□ 0.91
VARS-218ENST00000459667 LRP4O75096 1905 aa20.72■□□□□ 0.91
VARS-218ENST00000459667 GOLGA6CA6NDK9 693 aa20.72■□□□□ 0.91
VARS-218ENST00000459667 GOLGA6BA6NDN3 693 aa20.72■□□□□ 0.91
VARS-218ENST00000459667 ANKRD66B4E2M5 251 aa20.72■□□□□ 0.91
VARS-218ENST00000459667 DKK1O94907 266 aa20.72■□□□□ 0.91
VARS-218ENST00000459667 CLDN7O95471 211 aa20.72■□□□□ 0.91
VARS-218ENST00000459667 GOLGA6DP0CG33 693 aa20.72■□□□□ 0.91
VARS-218ENST00000459667 KELP23276 732 aa20.72■□□□□ 0.91
VARS-218ENST00000459667 RBL1P28749 1068 aa20.72■□□□□ 0.91
VARS-218ENST00000459667 BLKP51451 505 aa20.72■□□□□ 0.91
VARS-218ENST00000459667 STC1P52823 247 aa20.72■□□□□ 0.91
VARS-218ENST00000459667 PTSQ03393 145 aa20.72■□□□□ 0.91
VARS-218ENST00000459667 CDK18Q07002 472 aa20.72■□□□□ 0.91
VARS-218ENST00000459667 ALG11Q2TAA5 492 aa20.72■□□□□ 0.91
VARS-218ENST00000459667 PROX2Q3B8N5 592 aa20.72■□□□□ 0.91
VARS-218ENST00000459667 PRRT3Q5FWE3 981 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms