RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 ZKSCAN7Q9P0L1 754 aaPredicted RBP24.45■■□□□ 1.5
U2AF1-204ENST00000459639 IL17CQ9P0M4 197 aa24.45■■□□□ 1.5
U2AF1-204ENST00000459639 PKP3Q9Y446 797 aa24.45■■□□□ 1.5
U2AF1-204ENST00000459639 NUMBLQ9Y6R0 609 aa24.45■■□□□ 1.5
U2AF1-204ENST00000459639 OR51F1A6NGY5 319 aa24.44■■□□□ 1.5
U2AF1-204ENST00000459639 H7C0S8 307 aa24.44■■□□□ 1.5
U2AF1-204ENST00000459639 CD3EAPO15446 510 aaKnown RBP24.44■■□□□ 1.5
U2AF1-204ENST00000459639 CRHR1P34998 444 aa24.44■■□□□ 1.5
U2AF1-204ENST00000459639 ABCG1P45844 678 aa24.44■■□□□ 1.5
U2AF1-204ENST00000459639 PTPRRQ15256 657 aa24.44■■□□□ 1.5
U2AF1-204ENST00000459639 SEPT7Q16181 437 aaKnown RBP24.44■■□□□ 1.5
U2AF1-204ENST00000459639 MARCH4Q9P2E8 410 aaPredicted RBP24.44■■□□□ 1.5
U2AF1-204ENST00000459639 SP100P23497 879 aaPredicted RBP24.43■■□□□ 1.5
U2AF1-204ENST00000459639 HNF1BP35680 557 aa24.43■■□□□ 1.5
U2AF1-204ENST00000459639 CCT5P48643 541 aa24.43■■□□□ 1.5
U2AF1-204ENST00000459639 IL9RQ01113 521 aa24.43■■□□□ 1.5
U2AF1-204ENST00000459639 CDKN3Q16667 212 aa24.43■■□□□ 1.5
U2AF1-204ENST00000459639 FNDC3BQ53EP0 1204 aaKnown RBP24.43■■□□□ 1.5
U2AF1-204ENST00000459639 BRAT1Q6PJG6 821 aa24.43■■□□□ 1.5
U2AF1-204ENST00000459639 MICALCLQ6ZW33 695 aa24.43■■□□□ 1.5
U2AF1-204ENST00000459639 USP45Q70EL2 814 aa24.43■■□□□ 1.5
U2AF1-204ENST00000459639 SCRN2Q96FV2 425 aa24.43■■□□□ 1.5
U2AF1-204ENST00000459639 MCCC1Q96RQ3 725 aaPredicted RBP24.43■■□□□ 1.5
U2AF1-204ENST00000459639 ZFYVE1Q9HBF4 777 aa24.43■■□□□ 1.5
U2AF1-204ENST00000459639 FBXO6Q9NRD1 293 aaPredicted RBP24.43■■□□□ 1.5
U2AF1-204ENST00000459639 IL36AQ9UHA7 158 aa24.43■■□□□ 1.5
U2AF1-204ENST00000459639 BRWD1Q9NSI6 2320 aa24.43■■□□□ 1.5
U2AF1-204ENST00000459639 TSPAN11A1L157 253 aa24.43■■□□□ 1.5
U2AF1-204ENST00000459639 MPOP05164 745 aa24.43■■□□□ 1.5
U2AF1-204ENST00000459639 BMP1P13497 986 aa24.43■■□□□ 1.5
U2AF1-204ENST00000459639 CLCN5P51795 746 aa24.43■■□□□ 1.5
U2AF1-204ENST00000459639 POLR2LP62875 67 aaKnown RBP24.43■■□□□ 1.5
U2AF1-204ENST00000459639 PDE1CQ14123 709 aaPredicted RBP24.43■■□□□ 1.5
U2AF1-204ENST00000459639 TYSND1Q2T9J0 566 aa24.43■■□□□ 1.5
U2AF1-204ENST00000459639 HHATQ5VTY9 493 aa24.43■■□□□ 1.5
U2AF1-204ENST00000459639 LVRNQ6Q4G3 990 aa24.43■■□□□ 1.5
U2AF1-204ENST00000459639 GDAP1Q8TB36 358 aa24.43■■□□□ 1.5
U2AF1-204ENST00000459639 GRIN3AQ8TCU5 1115 aa24.43■■□□□ 1.5
U2AF1-204ENST00000459639 CKAP2Q8WWK9 683 aa24.43■■□□□ 1.5
U2AF1-204ENST00000459639 CHFRQ96EP1 664 aa24.43■■□□□ 1.5
U2AF1-204ENST00000459639 KLHL32Q96NJ5 620 aa24.43■■□□□ 1.5
U2AF1-204ENST00000459639 SLC13A1Q9BZW2 595 aa24.43■■□□□ 1.5
U2AF1-204ENST00000459639 EPN3Q9H201 632 aa24.43■■□□□ 1.5
U2AF1-204ENST00000459639 BRD9Q9H8M2 597 aa24.43■■□□□ 1.5
U2AF1-204ENST00000459639 SLC17A7Q9P2U7 560 aa24.43■■□□□ 1.5
U2AF1-204ENST00000459639 FKBPLQ9UIM3 349 aa24.43■■□□□ 1.5
U2AF1-204ENST00000459639 C1orf232A0A0U1RR37 186 aa24.42■■□□□ 1.5
U2AF1-204ENST00000459639 FAM95CA0A1B0GW59 222 aa24.42■■□□□ 1.5
U2AF1-204ENST00000459639 TBC1D3BA6NDS4 549 aa24.42■■□□□ 1.5
U2AF1-204ENST00000459639 GLRA3O75311 464 aa24.42■■□□□ 1.5
U2AF1-204ENST00000459639 HAUS5O94927 633 aa24.42■■□□□ 1.5
U2AF1-204ENST00000459639 KAT7O95251 611 aa24.42■■□□□ 1.5
U2AF1-204ENST00000459639 CSRP3P50461 194 aa24.42■■□□□ 1.5
U2AF1-204ENST00000459639 FASTKD1Q53R41 847 aaKnown RBP24.42■■□□□ 1.5
U2AF1-204ENST00000459639 NAIF1Q69YI7 327 aaPredicted RBP24.42■■□□□ 1.5
U2AF1-204ENST00000459639 CDHR3Q6ZTQ4 885 aa24.42■■□□□ 1.5
U2AF1-204ENST00000459639 TPRG1Q6ZUI0 275 aa24.42■■□□□ 1.5
U2AF1-204ENST00000459639 CMC1Q7Z7K0 106 aa24.42■■□□□ 1.5
U2AF1-204ENST00000459639 SDCCAG8Q86SQ7 713 aaPredicted RBP24.42■■□□□ 1.5
U2AF1-204ENST00000459639 TAX1BP1Q86VP1 789 aa24.42■■□□□ 1.5
U2AF1-204ENST00000459639 HCAR2Q8TDS4 363 aa24.42■■□□□ 1.5
U2AF1-204ENST00000459639 SLC39A10Q9ULF5 831 aa24.42■■□□□ 1.5
U2AF1-204ENST00000459639 PLLPQ9Y342 182 aa24.42■■□□□ 1.5
U2AF1-204ENST00000459639 TCF20Q9UGU0 1960 aaKnown RBP24.42■■□□□ 1.5
U2AF1-204ENST00000459639 TRIOBPQ9H2D6 2365 aa24.41■■□□□ 1.5
U2AF1-204ENST00000459639 EDDM13A0A1B0GTR0 161 aa24.41■■□□□ 1.5
U2AF1-204ENST00000459639 LEFTY1O75610 366 aa24.41■■□□□ 1.5
U2AF1-204ENST00000459639 S1PR4O95977 384 aa24.41■■□□□ 1.5
U2AF1-204ENST00000459639 FOXN2P32314 431 aa24.41■■□□□ 1.5
U2AF1-204ENST00000459639 GRIA2P42262 883 aa24.41■■□□□ 1.5
U2AF1-204ENST00000459639 ZNF234Q14588 700 aa24.41■■□□□ 1.5
U2AF1-204ENST00000459639 HNRNPA1L2Q32P51 320 aaKnown RBP24.41■■□□□ 1.5
U2AF1-204ENST00000459639 CNSTQ6PJW8 725 aa24.41■■□□□ 1.5
U2AF1-204ENST00000459639 NUDT18Q6ZVK8 323 aa24.41■■□□□ 1.5
U2AF1-204ENST00000459639 EID2BQ96D98 161 aa24.41■■□□□ 1.5
U2AF1-204ENST00000459639 MTG2Q9H4K7 406 aa24.41■■□□□ 1.5
U2AF1-204ENST00000459639 CAB39LQ9H9S4 337 aa24.41■■□□□ 1.5
U2AF1-204ENST00000459639 DCDC2Q9UHG0 476 aa24.41■■□□□ 1.5
U2AF1-204ENST00000459639 CORO1CQ9ULV4 474 aaPredicted RBP24.41■■□□□ 1.5
U2AF1-204ENST00000459639 COL4A2P08572 1712 aa24.41■■□□□ 1.5
U2AF1-204ENST00000459639 NPIPB15A6NHN6 443 aaPredicted RBP24.4■■□□□ 1.5
U2AF1-204ENST00000459639 H3BQ06 376 aaPredicted RBP24.4■■□□□ 1.5
U2AF1-204ENST00000459639 APODP05090 189 aa24.4■■□□□ 1.5
U2AF1-204ENST00000459639 CTSLP07711 333 aa24.4■■□□□ 1.5
U2AF1-204ENST00000459639 DHRS4L1P0CG22 281 aa24.4■■□□□ 1.5
U2AF1-204ENST00000459639 MC4RP32245 332 aa24.4■■□□□ 1.5
U2AF1-204ENST00000459639 ETV4P43268 484 aa24.4■■□□□ 1.5
U2AF1-204ENST00000459639 STC1P52823 247 aa24.4■■□□□ 1.5
U2AF1-204ENST00000459639 USP10Q14694 798 aaKnown RBP24.4■■□□□ 1.5
U2AF1-204ENST00000459639 INSCQ1MX18 579 aa24.4■■□□□ 1.5
U2AF1-204ENST00000459639 ARSIQ5FYB1 569 aa24.4■■□□□ 1.5
U2AF1-204ENST00000459639 ACVR1CQ8NER5 493 aa24.4■■□□□ 1.5
U2AF1-204ENST00000459639 MAGEB18Q96M61 343 aa24.4■■□□□ 1.5
U2AF1-204ENST00000459639 TCF12Q99081 682 aa24.4■■□□□ 1.5
U2AF1-204ENST00000459639 PAIP2Q9BPZ3 127 aaKnown RBP24.4■■□□□ 1.5
U2AF1-204ENST00000459639 TMEM245Q9H330 911 aa24.4■■□□□ 1.5
U2AF1-204ENST00000459639 BPIFA1Q9NP55 256 aa24.4■■□□□ 1.5
U2AF1-204ENST00000459639 INTS10Q9NVR2 710 aaKnown RBP24.4■■□□□ 1.5
U2AF1-204ENST00000459639 DKK3Q9UBP4 350 aa24.4■■□□□ 1.5
U2AF1-204ENST00000459639 A0A0U1RQS6 177 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms