RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 FERMT1Q9BQL6 677 aa17.55■□□□□ 0.4
SCARNA2-201ENST00000458748 TDRD1Q9BXT4 1180 aaKnown RBP17.55■□□□□ 0.4
SCARNA2-201ENST00000458748 KLF15Q9UIH9 416 aa17.55■□□□□ 0.4
SCARNA2-201ENST00000458748 HYOU1Q9Y4L1 999 aa17.55■□□□□ 0.4
SCARNA2-201ENST00000458748 OR1A2Q9Y585 309 aa17.55■□□□□ 0.4
SCARNA2-201ENST00000458748 KNTC1P50748 2209 aa17.55■□□□□ 0.4
SCARNA2-201ENST00000458748 BTNL10A8MVZ5 291 aa17.54■□□□□ 0.4
SCARNA2-201ENST00000458748 LMO7DNF2Z398 122 aa17.54■□□□□ 0.4
SCARNA2-201ENST00000458748 KCNK1O00180 336 aa17.54■□□□□ 0.4
SCARNA2-201ENST00000458748 MTSS1O43312 755 aa17.54■□□□□ 0.4
SCARNA2-201ENST00000458748 TNFP01375 233 aa17.54■□□□□ 0.4
SCARNA2-201ENST00000458748 HLA-DQB2P05538 268 aa17.54■□□□□ 0.4
SCARNA2-201ENST00000458748 PYGLP06737 847 aa17.54■□□□□ 0.4
SCARNA2-201ENST00000458748 CETN2P41208 172 aa17.54■□□□□ 0.4
SCARNA2-201ENST00000458748 CDKN2BP42772 138 aa17.54■□□□□ 0.4
SCARNA2-201ENST00000458748 SRP54P61011 504 aaKnown RBP17.54■□□□□ 0.4
SCARNA2-201ENST00000458748 DSC2Q02487 901 aa17.54■□□□□ 0.4
SCARNA2-201ENST00000458748 PNCKQ6P2M8 343 aa17.54■□□□□ 0.4
SCARNA2-201ENST00000458748 LVRNQ6Q4G3 990 aa17.54■□□□□ 0.4
SCARNA2-201ENST00000458748 MFSD7Q6UXD7 560 aa17.54■□□□□ 0.4
SCARNA2-201ENST00000458748 SPOCD1Q6ZMY3 1216 aa17.54■□□□□ 0.4
SCARNA2-201ENST00000458748 KIAA1328Q86T90 577 aa17.54■□□□□ 0.4
SCARNA2-201ENST00000458748 GKN2Q86XP6 184 aa17.54■□□□□ 0.4
SCARNA2-201ENST00000458748 RAVER1Q8IY67 606 aaKnown RBP17.54■□□□□ 0.4
SCARNA2-201ENST00000458748 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.54■□□□□ 0.4not detected■■■■■ 60.1
SCARNA2-201ENST00000458748 EXD1Q8NHP7 514 aa17.54■□□□□ 0.4
SCARNA2-201ENST00000458748 PIH1D2Q8WWB5 315 aa17.54■□□□□ 0.4
SCARNA2-201ENST00000458748 P3H4Q92791 437 aa17.54■□□□□ 0.4
SCARNA2-201ENST00000458748 COQ10AQ96MF6 247 aa17.54■□□□□ 0.4
SCARNA2-201ENST00000458748 NSMCE3Q96MG7 304 aa17.54■□□□□ 0.4
SCARNA2-201ENST00000458748 OLFM3Q96PB7 478 aa17.54■□□□□ 0.4
SCARNA2-201ENST00000458748 PCDH9Q9HC56 1237 aa17.54■□□□□ 0.4
SCARNA2-201ENST00000458748 PHPT1Q9NRX4 125 aaPredicted RBP17.54■□□□□ 0.4
SCARNA2-201ENST00000458748 SEPT10Q9P0V9 454 aa17.54■□□□□ 0.4
SCARNA2-201ENST00000458748 LHX6Q9UPM6 363 aa17.54■□□□□ 0.4
SCARNA2-201ENST00000458748 MYLKQ15746 1914 aa17.54■□□□□ 0.4
SCARNA2-201ENST00000458748 ANKRD11Q6UB99 2663 aaPredicted RBP17.54■□□□□ 0.4
SCARNA2-201ENST00000458748 APC2O95996 2303 aa17.53■□□□□ 0.4
SCARNA2-201ENST00000458748 A0A0J9YYE9 177 aa17.53■□□□□ 0.4
SCARNA2-201ENST00000458748 FAM149AA5PLN7 773 aa17.53■□□□□ 0.4
SCARNA2-201ENST00000458748 TRABD2BA6NFA1 517 aa17.53■□□□□ 0.4
SCARNA2-201ENST00000458748 NPIPB15A6NHN6 443 aaPredicted RBP17.53■□□□□ 0.4
SCARNA2-201ENST00000458748 TNFRSF10CO14798 259 aa17.53■□□□□ 0.4
SCARNA2-201ENST00000458748 FZD6O60353 706 aa17.53■□□□□ 0.4
SCARNA2-201ENST00000458748 CST8O60676 142 aa17.53■□□□□ 0.4
SCARNA2-201ENST00000458748 TRBC1P01850 177 aa17.53■□□□□ 0.4
SCARNA2-201ENST00000458748 TRIM23P36406 574 aa17.53■□□□□ 0.4
SCARNA2-201ENST00000458748 TNNT3P45378 269 aaPredicted RBP17.53■□□□□ 0.4
SCARNA2-201ENST00000458748 COPS2P61201 443 aa17.53■□□□□ 0.4
SCARNA2-201ENST00000458748 KAZNQ674X7 775 aa17.53■□□□□ 0.4
SCARNA2-201ENST00000458748 CCDC70Q6NSX1 233 aa17.53■□□□□ 0.4
SCARNA2-201ENST00000458748 RD3Q7Z3Z2 195 aa17.53■□□□□ 0.4
SCARNA2-201ENST00000458748 OR56A4Q8NGH8 313 aa17.53■□□□□ 0.4
SCARNA2-201ENST00000458748 ARRDC2Q8TBH0 407 aa17.53■□□□□ 0.4
SCARNA2-201ENST00000458748 KIAA1524Q8TCG1 905 aa17.53■□□□□ 0.4
SCARNA2-201ENST00000458748 TFB1MQ8WVM0 346 aaKnown RBP17.53■□□□□ 0.4
SCARNA2-201ENST00000458748 DTD2Q96FN9 168 aa17.53■□□□□ 0.4
SCARNA2-201ENST00000458748 ABCG4Q9H172 646 aa17.53■□□□□ 0.4
SCARNA2-201ENST00000458748 DGKBQ9Y6T7 804 aa17.53■□□□□ 0.4
SCARNA2-201ENST00000458748 ACACAQ13085 2346 aa17.52■□□□□ 0.4
SCARNA2-201ENST00000458748 CCDC66A2RUB6 948 aa17.52■□□□□ 0.4
SCARNA2-201ENST00000458748 GOLGA6CA6NDK9 693 aa17.52■□□□□ 0.4
SCARNA2-201ENST00000458748 GOLGA6BA6NDN3 693 aa17.52■□□□□ 0.4
SCARNA2-201ENST00000458748 CAPN8A6NHC0 703 aa17.52■□□□□ 0.4
SCARNA2-201ENST00000458748 GOLGA6DP0CG33 693 aa17.52■□□□□ 0.4
SCARNA2-201ENST00000458748 MYCLP1P12525 358 aaPredicted RBP17.52■□□□□ 0.4
SCARNA2-201ENST00000458748 CTPS1P17812 591 aa17.52■□□□□ 0.4
SCARNA2-201ENST00000458748 TEAD1P28347 426 aa17.52■□□□□ 0.4
SCARNA2-201ENST00000458748 ETV3P41162 512 aa17.52■□□□□ 0.4
SCARNA2-201ENST00000458748 CD86P42081 329 aa17.52■□□□□ 0.4
SCARNA2-201ENST00000458748 VAV2P52735 878 aa17.52■□□□□ 0.4
SCARNA2-201ENST00000458748 KIF5AQ12840 1032 aa17.52■□□□□ 0.4
SCARNA2-201ENST00000458748 NR0B2Q15466 257 aa17.52■□□□□ 0.4
SCARNA2-201ENST00000458748 SLC14A2Q15849 920 aa17.52■□□□□ 0.4
SCARNA2-201ENST00000458748 TAZQ16635 292 aa17.52■□□□□ 0.4
SCARNA2-201ENST00000458748 DEFB133Q30KQ1 61 aa17.52■□□□□ 0.4
SCARNA2-201ENST00000458748 HES3Q5TGS1 186 aa17.52■□□□□ 0.4
SCARNA2-201ENST00000458748 CCDC181Q5TID7 509 aa17.52■□□□□ 0.4
SCARNA2-201ENST00000458748 C19orf48Q6RUI8 117 aa17.52■□□□□ 0.4
SCARNA2-201ENST00000458748 KDM7AQ6ZMT4 941 aa17.52■□□□□ 0.4
SCARNA2-201ENST00000458748 NT5DC3Q86UY8 548 aa17.52■□□□□ 0.4
SCARNA2-201ENST00000458748 RBFAQ8N0V3 343 aa17.52■□□□□ 0.4
SCARNA2-201ENST00000458748 PLA2G15Q8NCC3 412 aa17.52■□□□□ 0.4
SCARNA2-201ENST00000458748 LPCAT1Q8NF37 534 aa17.52■□□□□ 0.4
SCARNA2-201ENST00000458748 CCHCR1Q8TD31 782 aa17.52■□□□□ 0.4
SCARNA2-201ENST00000458748 FUBP1Q96AE4 644 aaKnown RBP17.52■□□□□ 0.4
SCARNA2-201ENST00000458748 LRRC61Q9BV99 259 aa17.52■□□□□ 0.4
SCARNA2-201ENST00000458748 GOLGA6AQ9NYA3 693 aa17.52■□□□□ 0.4
SCARNA2-201ENST00000458748 CHKBQ9Y259 395 aa17.52■□□□□ 0.4
SCARNA2-201ENST00000458748 FREM2Q5SZK8 3169 aa17.51■□□□□ 0.39
SCARNA2-201ENST00000458748 LRP4O75096 1905 aa17.51■□□□□ 0.39
SCARNA2-201ENST00000458748 PDHA1P08559 390 aa17.51■□□□□ 0.39
SCARNA2-201ENST00000458748 HOXB3P14651 431 aaPredicted RBP17.51■□□□□ 0.39
SCARNA2-201ENST00000458748 INSM1Q01101 510 aaPredicted RBP17.51■□□□□ 0.39
SCARNA2-201ENST00000458748 DPTQ07507 201 aa17.51■□□□□ 0.39
SCARNA2-201ENST00000458748 NIPAL4Q0D2K0 466 aa17.51■□□□□ 0.39
SCARNA2-201ENST00000458748 PEX6Q13608 980 aa17.51■□□□□ 0.39
SCARNA2-201ENST00000458748 PPP2R5EQ16537 467 aa17.51■□□□□ 0.39
SCARNA2-201ENST00000458748 ALG11Q2TAA5 492 aa17.51■□□□□ 0.39
SCARNA2-201ENST00000458748 C6orf132Q5T0Z8 1188 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms