RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 PON2Q15165 354 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 SKIV2LQ15477 1246 aaKnown RBP8.75□□□□□ -1.01
RIF1-208ENST00000457745 KLHL38Q2WGJ6 581 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 FNDC3BQ53EP0 1204 aaKnown RBP8.75□□□□□ -1.01
RIF1-208ENST00000457745 ARMC12Q5T9G4 340 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 MROH9Q5TGP6 573 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 CES4AQ5XG92 561 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 FAM219BQ5XKK7 198 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 PSAPL1Q6NUJ1 521 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 KIAA1211LQ6NV74 962 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 ZNF549Q6P9A3 640 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 PTAR1Q7Z6K3 402 aaPredicted RBP8.75□□□□□ -1.01
RIF1-208ENST00000457745 SLC26A11Q86WA9 606 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 ZC3HC1Q86WB0 502 aaKnown RBP8.75□□□□□ -1.01
RIF1-208ENST00000457745 CNTN4Q8IWV2 1026 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 YAF2Q8IY57 180 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 PELI3Q8N2H9 469 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 ATXN2LQ8WWM7 1075 aaKnown RBP8.75□□□□□ -1.01
RIF1-208ENST00000457745 NECTIN4Q96NY8 510 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 NDNQ99608 321 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 TRABDQ9H4I3 376 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 SUV39H2Q9H5I1 410 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 BRD9Q9H8M2 597 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 CD248Q9HCU0 757 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 CD93Q9NPY3 652 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 PRSS16Q9NQE7 514 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 ZNF358Q9NW07 568 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 C2orf42Q9NWW7 574 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 THG1LQ9NWX6 298 aaKnown RBP8.75□□□□□ -1.01
RIF1-208ENST00000457745 GOLGA6AQ9NYA3 693 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 IL17CQ9P0M4 197 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 THAP10Q9P2Z0 257 aaPredicted RBP8.75□□□□□ -1.01
RIF1-208ENST00000457745 B4GALT6Q9UBX8 382 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 FETUBQ9UGM5 382 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 MBD1Q9UIS9 605 aaPredicted RBP8.75□□□□□ -1.01
RIF1-208ENST00000457745 TMPRSS11EQ9UL52 423 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 FNDC3AQ9Y2H6 1198 aaKnown RBP8.75□□□□□ -1.01
RIF1-208ENST00000457745 NUMA1Q14980 2115 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 UNC80Q8N2C7 3258 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 HMGB1P1B2RPK0 211 aaPredicted RBP8.74□□□□□ -1.01
RIF1-208ENST00000457745 TPP1O14773 563 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 TYROBPO43914 113 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 RPP40O75818 363 aaKnown RBP8.74□□□□□ -1.01
RIF1-208ENST00000457745 HAUS5O94927 633 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 S1PR4O95977 384 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 AHSGP02765 367 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 SRPRAP08240 638 aaKnown RBP8.74□□□□□ -1.01
RIF1-208ENST00000457745 CD72P21854 359 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 MAGEA12P43365 314 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 NEK3P51956 506 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 SNRPD1P62314 119 aaKnown RBP8.74□□□□□ -1.01
RIF1-208ENST00000457745 PPP2R2AP63151 447 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 SULT2A1Q06520 285 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 DLG1Q12959 904 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 ENPP2Q13822 863 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 LRRC14Q15048 493 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 RASA2Q15283 850 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 TAF1AQ15573 450 aaPredicted RBP8.74□□□□□ -1.01
RIF1-208ENST00000457745 SMAD2Q15796 467 aaKnown RBP8.74□□□□□ -1.01
RIF1-208ENST00000457745 HNRNPA1L2Q32P51 320 aaKnown RBP8.74□□□□□ -1.01
RIF1-208ENST00000457745 SETMARQ53H47 684 aaPredicted RBP8.74□□□□□ -1.01
RIF1-208ENST00000457745 ZNF470Q6ECI4 717 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 NEPROQ6NW34 567 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 GDPD4Q6W3E5 623 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 CYS1Q717R9 158 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 GLT6D1Q7Z4J2 308 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 HSD11B1LQ7Z5J1 315 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 STRA8Q7Z7C7 330 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 LRRC6Q86X45 466 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 SLC41A1Q8IVJ1 513 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 CEP97Q8IW35 865 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 PLD6Q8N2A8 252 aaKnown RBP8.74□□□□□ -1.01
RIF1-208ENST00000457745 DCLK2Q8N568 766 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 DEFB123Q8N688 67 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 BANPQ8N9N5 519 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 C2CD4AQ8NCU7 369 aaPredicted RBP8.74□□□□□ -1.01
RIF1-208ENST00000457745 LKAAEAR1Q8TD35 194 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 BRSK1Q8TDC3 778 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 DENND1AQ8TEH3 1009 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 CDKN2AIPNLQ96HQ2 116 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 MCCC1Q96RQ3 725 aaPredicted RBP8.74□□□□□ -1.01
RIF1-208ENST00000457745 RBBP8Q99708 897 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 OLFM1Q99784 485 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 SELENOSQ9BQE4 189 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 HEPHQ9BQS7 1158 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 CPEB1Q9BZB8 566 aaKnown RBP8.74□□□□□ -1.01
RIF1-208ENST00000457745 ACBD3Q9H3P7 528 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 RABEP2Q9H5N1 569 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 PPANQ9NQ55 473 aaKnown RBP8.74□□□□□ -1.01
RIF1-208ENST00000457745 NLE1Q9NVX2 485 aaPredicted RBP8.74□□□□□ -1.01
RIF1-208ENST00000457745 GALPQ9UBC7 116 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 SERGEFQ9UGK8 458 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 ZNF180Q9UJW8 692 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 IKZF3Q9UKT9 509 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 EMCNQ9ULC0 261 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 MED16Q9Y2X0 877 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 STON1Q9Y6Q2 735 aa8.74□□□□□ -1.01
RIF1-208ENST00000457745 CXorf51AA0A1B0GTR3 108 aa8.73□□□□□ -1.01
RIF1-208ENST00000457745 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.73□□□□□ -1.01
RIF1-208ENST00000457745 TMEM120BA0PK00 339 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms