RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 PPIDQ08752 370 aaKnown RBP21.24■□□□□ 0.99
HMGB3-205ENST00000455596 GUSBP11Q6P575 273 aa21.24■□□□□ 0.99
HMGB3-205ENST00000455596 LVRNQ6Q4G3 990 aa21.24■□□□□ 0.99
HMGB3-205ENST00000455596 EFL1Q7Z2Z2 1120 aaKnown RBP21.24■□□□□ 0.99
HMGB3-205ENST00000455596 HSD11B1LQ7Z5J1 315 aa21.24■□□□□ 0.99
HMGB3-205ENST00000455596 GKN2Q86XP6 184 aa21.24■□□□□ 0.99
HMGB3-205ENST00000455596 CCDC170Q8IYT3 715 aa21.24■□□□□ 0.99
HMGB3-205ENST00000455596 CBARPQ8N350 705 aaPredicted RBP21.24■□□□□ 0.99
HMGB3-205ENST00000455596 ARRDC2Q8TBH0 407 aa21.24■□□□□ 0.99
HMGB3-205ENST00000455596 MAPK15Q8TD08 544 aa21.24■□□□□ 0.99
HMGB3-205ENST00000455596 RNF25Q96BH1 459 aaPredicted RBP21.24■□□□□ 0.99
HMGB3-205ENST00000455596 DTD2Q96FN9 168 aa21.24■□□□□ 0.99
HMGB3-205ENST00000455596 PDXPQ96GD0 296 aa21.24■□□□□ 0.99
HMGB3-205ENST00000455596 HYOU1Q9Y4L1 999 aa21.24■□□□□ 0.99
HMGB3-205ENST00000455596 DGKBQ9Y6T7 804 aa21.24■□□□□ 0.99
HMGB3-205ENST00000455596 ASXL3Q9C0F0 2248 aa21.24■□□□□ 0.99
HMGB3-205ENST00000455596 TMEM202A6NGA9 273 aa21.23■□□□□ 0.99
HMGB3-205ENST00000455596 PDE2AO00408 941 aaPredicted RBP21.23■□□□□ 0.99
HMGB3-205ENST00000455596 TNFRSF10CO14798 259 aa21.23■□□□□ 0.99
HMGB3-205ENST00000455596 LCA5LO95447 670 aa21.23■□□□□ 0.99
HMGB3-205ENST00000455596 ETV3P41162 512 aa21.23■□□□□ 0.99
HMGB3-205ENST00000455596 HADHBP55084 474 aaKnown RBP21.23■□□□□ 0.99
HMGB3-205ENST00000455596 PTPRRQ15256 657 aa21.23■□□□□ 0.99
HMGB3-205ENST00000455596 CDCP2Q5VXM1 449 aa21.23■□□□□ 0.99
HMGB3-205ENST00000455596 NYAP1Q6ZVC0 841 aa21.23■□□□□ 0.99
HMGB3-205ENST00000455596 TSPAN33Q86UF1 283 aa21.23■□□□□ 0.99
HMGB3-205ENST00000455596 RFX6Q8HWS3 928 aa21.23■□□□□ 0.99
HMGB3-205ENST00000455596 SLC35F3Q8IY50 421 aa21.23■□□□□ 0.99
HMGB3-205ENST00000455596 PELI3Q8N2H9 469 aa21.23■□□□□ 0.99
HMGB3-205ENST00000455596 LGMNQ99538 433 aa21.23■□□□□ 0.99
HMGB3-205ENST00000455596 LGR4Q9BXB1 951 aa21.23■□□□□ 0.99
HMGB3-205ENST00000455596 TDRD1Q9BXT4 1180 aaKnown RBP21.23■□□□□ 0.99
HMGB3-205ENST00000455596 RBSNQ9H1K0 784 aa21.23■□□□□ 0.99
HMGB3-205ENST00000455596 CHKBQ9Y259 395 aa21.23■□□□□ 0.99
HMGB3-205ENST00000455596 AK5Q9Y6K8 562 aa21.23■□□□□ 0.99
HMGB3-205ENST00000455596 KCNK1O00180 336 aa21.22■□□□□ 0.99
HMGB3-205ENST00000455596 MYCLP1P12525 358 aaPredicted RBP21.22■□□□□ 0.99
HMGB3-205ENST00000455596 ZNF30P17039 623 aa21.22■□□□□ 0.99
HMGB3-205ENST00000455596 CYLC1P35663 651 aaPredicted RBP21.22■□□□□ 0.99
HMGB3-205ENST00000455596 ZNF75DP51815 510 aa21.22■□□□□ 0.99
HMGB3-205ENST00000455596 IFI35P80217 286 aaPredicted RBP21.22■□□□□ 0.99
HMGB3-205ENST00000455596 AP1B1Q10567 949 aa21.22■□□□□ 0.99
HMGB3-205ENST00000455596 IHHQ14623 411 aa21.22■□□□□ 0.99
HMGB3-205ENST00000455596 RTP5Q14D33 572 aa21.22■□□□□ 0.99
HMGB3-205ENST00000455596 SPA17Q15506 151 aa21.22■□□□□ 0.99
HMGB3-205ENST00000455596 TCEA2Q15560 299 aa21.22■□□□□ 0.99
HMGB3-205ENST00000455596 Q6ZVL8 140 aa21.22■□□□□ 0.99
HMGB3-205ENST00000455596 OR1E3Q8WZA6 343 aa21.22■□□□□ 0.99
HMGB3-205ENST00000455596 NAT6Q93015 286 aa21.22■□□□□ 0.99
HMGB3-205ENST00000455596 MRFAP1L1Q96HT8 127 aa21.22■□□□□ 0.99
HMGB3-205ENST00000455596 DEPDC7Q96QD5 511 aa21.22■□□□□ 0.99
HMGB3-205ENST00000455596 RBM15Q96T37 977 aaKnown RBP eCLIP21.22■□□□□ 0.99
HMGB3-205ENST00000455596 FGF22Q9HCT0 170 aa21.22■□□□□ 0.99
HMGB3-205ENST00000455596 LUC7LQ9NQ29 371 aaKnown RBP21.22■□□□□ 0.99
HMGB3-205ENST00000455596 MRPL40Q9NQ50 206 aaKnown RBP21.22■□□□□ 0.99
HMGB3-205ENST00000455596 PHPT1Q9NRX4 125 aaPredicted RBP21.22■□□□□ 0.99
HMGB3-205ENST00000455596 DNPEPQ9ULA0 475 aa21.22■□□□□ 0.99
HMGB3-205ENST00000455596 PCDHA13Q9Y5I0 950 aa21.22■□□□□ 0.99
HMGB3-205ENST00000455596 ZFC3H1O60293 1989 aaKnown RBP21.22■□□□□ 0.99
HMGB3-205ENST00000455596 A0A0J9YYE9 177 aa21.21■□□□□ 0.99
HMGB3-205ENST00000455596 GOLGA6CA6NDK9 693 aa21.21■□□□□ 0.99
HMGB3-205ENST00000455596 GOLGA6BA6NDN3 693 aa21.21■□□□□ 0.99
HMGB3-205ENST00000455596 PPP1R12AO14974 1030 aaPredicted RBP21.21■□□□□ 0.99
HMGB3-205ENST00000455596 JCHAINP01591 159 aa21.21■□□□□ 0.99
HMGB3-205ENST00000455596 TRBC1P01850 177 aa21.21■□□□□ 0.99
HMGB3-205ENST00000455596 GOLGA6DP0CG33 693 aa21.21■□□□□ 0.99
HMGB3-205ENST00000455596 NIPAL4Q0D2K0 466 aa21.21■□□□□ 0.99
HMGB3-205ENST00000455596 PDK1Q15118 436 aa21.21■□□□□ 0.99
HMGB3-205ENST00000455596 LRRC66Q68CR7 880 aa21.21■□□□□ 0.99
HMGB3-205ENST00000455596 KCTD16Q68DU8 428 aa21.21■□□□□ 0.99
HMGB3-205ENST00000455596 RAET1GQ6H3X3 334 aa21.21■□□□□ 0.99
HMGB3-205ENST00000455596 CRTC1Q6UUV9 634 aa21.21■□□□□ 0.99
HMGB3-205ENST00000455596 HEATR4Q86WZ0 1026 aa21.21■□□□□ 0.99
HMGB3-205ENST00000455596 ARL10Q8N8L6 244 aa21.21■□□□□ 0.99
HMGB3-205ENST00000455596 TEX101Q9BY14 249 aa21.21■□□□□ 0.99
HMGB3-205ENST00000455596 PCDH9Q9HC56 1237 aa21.21■□□□□ 0.99
HMGB3-205ENST00000455596 GOLGA6AQ9NYA3 693 aa21.21■□□□□ 0.99
HMGB3-205ENST00000455596 SIRPGQ9P1W8 387 aa21.21■□□□□ 0.99
HMGB3-205ENST00000455596 GULP1Q9UBP9 304 aa21.21■□□□□ 0.99
HMGB3-205ENST00000455596 MOSPD1Q9UJG1 213 aa21.21■□□□□ 0.99
HMGB3-205ENST00000455596 PADI4Q9UM07 663 aa21.21■□□□□ 0.99
HMGB3-205ENST00000455596 RAXQ9Y2V3 346 aa21.21■□□□□ 0.99
HMGB3-205ENST00000455596 ASPMQ8IZT6 3477 aa21.21■□□□□ 0.99
HMGB3-205ENST00000455596 ARHGEF17Q96PE2 2063 aaPredicted RBP21.2■□□□□ 0.99
HMGB3-205ENST00000455596 PRSS38A1L453 326 aa21.2■□□□□ 0.98
HMGB3-205ENST00000455596 CAPN8A6NHC0 703 aa21.2■□□□□ 0.98
HMGB3-205ENST00000455596 PSTPIP1O43586 416 aa21.2■□□□□ 0.98
HMGB3-205ENST00000455596 TGM2P21980 687 aa21.2■□□□□ 0.98
HMGB3-205ENST00000455596 TEAD1P28347 426 aa21.2■□□□□ 0.98
HMGB3-205ENST00000455596 RPL26P61254 145 aaKnown RBP21.2■□□□□ 0.98
HMGB3-205ENST00000455596 DYNLT1P63172 113 aa21.2■□□□□ 0.98
HMGB3-205ENST00000455596 ZBTB17Q13105 803 aa21.2■□□□□ 0.98
HMGB3-205ENST00000455596 PERM1Q5SV97 790 aa21.2■□□□□ 0.98
HMGB3-205ENST00000455596 MFSD7Q6UXD7 560 aa21.2■□□□□ 0.98
HMGB3-205ENST00000455596 NPNTQ6UXI9 565 aa21.2■□□□□ 0.98
HMGB3-205ENST00000455596 TECPR1Q7Z6L1 1165 aa21.2■□□□□ 0.98
HMGB3-205ENST00000455596 LPCAT1Q8NF37 534 aa21.2■□□□□ 0.98
HMGB3-205ENST00000455596 OLFM3Q96PB7 478 aa21.2■□□□□ 0.98
HMGB3-205ENST00000455596 PANX2Q96RD6 677 aa21.2■□□□□ 0.98
HMGB3-205ENST00000455596 CYP4F12Q9HCS2 524 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms