RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 TSTD2Q5T7W7 516 aa16.6■□□□□ 0.25
CCDC90B-202ENST00000455220 STEAP4Q687X5 459 aa16.6■□□□□ 0.25
CCDC90B-202ENST00000455220 RAVER1Q8IY67 606 aaKnown RBP16.6■□□□□ 0.25
CCDC90B-202ENST00000455220 PGBD3Q8N328 593 aa16.6■□□□□ 0.25
CCDC90B-202ENST00000455220 GANCQ8TET4 914 aa16.6■□□□□ 0.25
CCDC90B-202ENST00000455220 STYXQ8WUJ0 223 aa16.6■□□□□ 0.25
CCDC90B-202ENST00000455220 PBXIP1Q96AQ6 731 aa16.6■□□□□ 0.25
CCDC90B-202ENST00000455220 C9orf72Q96LT7 481 aa16.6■□□□□ 0.25
CCDC90B-202ENST00000455220 ZNF778Q96MU6 729 aa16.6■□□□□ 0.25
CCDC90B-202ENST00000455220 TRIM56Q9BRZ2 755 aaKnown RBP16.6■□□□□ 0.25
CCDC90B-202ENST00000455220 GPR63Q9BZJ6 419 aa16.6■□□□□ 0.25
CCDC90B-202ENST00000455220 CDC42EP4Q9H3Q1 356 aaKnown RBP16.6■□□□□ 0.25
CCDC90B-202ENST00000455220 CD93Q9NPY3 652 aa16.6■□□□□ 0.25
CCDC90B-202ENST00000455220 PRMT8Q9NR22 394 aaPredicted RBP16.6■□□□□ 0.25
CCDC90B-202ENST00000455220 ZC3H7BQ9UGR2 993 aaKnown RBP16.6■□□□□ 0.25
CCDC90B-202ENST00000455220 KCTD3Q9Y597 815 aa16.6■□□□□ 0.25
CCDC90B-202ENST00000455220 TTC4O95801 387 aa16.6■□□□□ 0.25
CCDC90B-202ENST00000455220 LPOP22079 712 aaPredicted RBP16.6■□□□□ 0.25
CCDC90B-202ENST00000455220 STC1P52823 247 aa16.6■□□□□ 0.25
CCDC90B-202ENST00000455220 ARHGEF7Q14155 803 aa16.6■□□□□ 0.25
CCDC90B-202ENST00000455220 LIPIQ6XZB0 460 aa16.6■□□□□ 0.25
CCDC90B-202ENST00000455220 TRMT10CQ7L0Y3 403 aaKnown RBP16.6■□□□□ 0.25
CCDC90B-202ENST00000455220 TMEM105Q8N8V8 129 aa16.6■□□□□ 0.25
CCDC90B-202ENST00000455220 OR13J1Q8NGT2 312 aa16.6■□□□□ 0.25
CCDC90B-202ENST00000455220 HNRNPLLQ8WVV9 542 aaKnown RBP16.6■□□□□ 0.25
CCDC90B-202ENST00000455220 MFSD3Q96ES6 412 aa16.6■□□□□ 0.25
CCDC90B-202ENST00000455220 COL25A1Q9BXS0 654 aaPredicted RBP16.6■□□□□ 0.25
CCDC90B-202ENST00000455220 KDM4CQ9H3R0 1056 aa16.6■□□□□ 0.25
CCDC90B-202ENST00000455220 SPATA6Q9NWH7 488 aaPredicted RBP16.6■□□□□ 0.25
CCDC90B-202ENST00000455220 NINJ2Q9NZG7 142 aa16.6■□□□□ 0.25
CCDC90B-202ENST00000455220 ZCWPW2A0A1B0GU75 182 aa16.59■□□□□ 0.25
CCDC90B-202ENST00000455220 A8MX80 341 aa16.59■□□□□ 0.25
CCDC90B-202ENST00000455220 C10orf142B7Z368 130 aa16.59■□□□□ 0.25
CCDC90B-202ENST00000455220 ZNF217O75362 1048 aa16.59■□□□□ 0.25
CCDC90B-202ENST00000455220 ERLIN1O75477 346 aa16.59■□□□□ 0.25
CCDC90B-202ENST00000455220 POLBP06746 335 aa16.59■□□□□ 0.25
CCDC90B-202ENST00000455220 C1SP09871 688 aa16.59■□□□□ 0.25
CCDC90B-202ENST00000455220 ELFN1P0C7U0 828 aa16.59■□□□□ 0.25
CCDC90B-202ENST00000455220 TSHRP16473 764 aa16.59■□□□□ 0.25
CCDC90B-202ENST00000455220 NMBRP28336 390 aa16.59■□□□□ 0.25
CCDC90B-202ENST00000455220 PMS2P54278 862 aa16.59■□□□□ 0.25
CCDC90B-202ENST00000455220 CREB5Q02930 508 aa16.59■□□□□ 0.25
CCDC90B-202ENST00000455220 ANKRD20A4Q4UJ75 823 aa16.59■□□□□ 0.25
CCDC90B-202ENST00000455220 UNC5AQ6ZN44 842 aa16.59■□□□□ 0.25
CCDC90B-202ENST00000455220 FBXL6Q8N531 539 aa16.59■□□□□ 0.25
CCDC90B-202ENST00000455220 DNAJC1Q96KC8 554 aaKnown RBP16.59■□□□□ 0.25
CCDC90B-202ENST00000455220 TTC25Q96NG3 672 aa16.59■□□□□ 0.25
CCDC90B-202ENST00000455220 FCRL3Q96P31 734 aaPredicted RBP16.59■□□□□ 0.25
CCDC90B-202ENST00000455220 SEMA4AQ9H3S1 761 aa16.59■□□□□ 0.25
CCDC90B-202ENST00000455220 SGK2Q9HBY8 427 aa16.59■□□□□ 0.25
CCDC90B-202ENST00000455220 LRRC4CQ9HCJ2 640 aa16.59■□□□□ 0.25
CCDC90B-202ENST00000455220 PREBQ9HCU5 417 aa16.59■□□□□ 0.25
CCDC90B-202ENST00000455220 NLE1Q9NVX2 485 aaPredicted RBP16.59■□□□□ 0.25
CCDC90B-202ENST00000455220 SLC2A6Q9UGQ3 507 aa16.59■□□□□ 0.25
CCDC90B-202ENST00000455220 RPS6KL1Q9Y6S9 549 aa16.59■□□□□ 0.25
CCDC90B-202ENST00000455220 LRRK1Q38SD2 2015 aa16.59■□□□□ 0.25
CCDC90B-202ENST00000455220 ZNF106Q9H2Y7 1883 aaKnown RBP16.58■□□□□ 0.24
CCDC90B-202ENST00000455220 TNFRSF10AO00220 468 aa16.58■□□□□ 0.24
CCDC90B-202ENST00000455220 NEMP1O14524 444 aa16.58■□□□□ 0.24
CCDC90B-202ENST00000455220 STX7O15400 261 aaKnown RBP16.58■□□□□ 0.24
CCDC90B-202ENST00000455220 BUD23O43709 281 aaKnown RBP16.58■□□□□ 0.24
CCDC90B-202ENST00000455220 GSTA2P09210 222 aa16.58■□□□□ 0.24
CCDC90B-202ENST00000455220 TDGF1P13385 188 aa16.58■□□□□ 0.24
CCDC90B-202ENST00000455220 H2AFXP16104 143 aaPredicted RBP16.58■□□□□ 0.24
CCDC90B-202ENST00000455220 GM2AP17900 193 aa16.58■□□□□ 0.24
CCDC90B-202ENST00000455220 LIG3P49916 1009 aa16.58■□□□□ 0.24
CCDC90B-202ENST00000455220 GPX6P59796 221 aa16.58■□□□□ 0.24
CCDC90B-202ENST00000455220 FRG1Q14331 258 aaKnown RBP16.58■□□□□ 0.24
CCDC90B-202ENST00000455220 PTPRCAPQ14761 206 aa16.58■□□□□ 0.24
CCDC90B-202ENST00000455220 CRYMQ14894 314 aa16.58■□□□□ 0.24
CCDC90B-202ENST00000455220 KYNUQ16719 465 aa16.58■□□□□ 0.24
CCDC90B-202ENST00000455220 SKIDA1Q1XH10 827 aa16.58■□□□□ 0.24
CCDC90B-202ENST00000455220 SPANXN3Q5MJ09 141 aa16.58■□□□□ 0.24
CCDC90B-202ENST00000455220 ESRP1Q6NXG1 681 aaKnown RBP16.58■□□□□ 0.24
CCDC90B-202ENST00000455220 NEK5Q6P3R8 708 aa16.58■□□□□ 0.24
CCDC90B-202ENST00000455220 CES3Q6UWW8 571 aa16.58■□□□□ 0.24
CCDC90B-202ENST00000455220 MREGQ8N565 214 aa16.58■□□□□ 0.24
CCDC90B-202ENST00000455220 OR4K2Q8NGD2 314 aa16.58■□□□□ 0.24
CCDC90B-202ENST00000455220 OR13C4Q8NGS5 318 aa16.58■□□□□ 0.24
CCDC90B-202ENST00000455220 OR14C36Q8NHC7 312 aa16.58■□□□□ 0.24
CCDC90B-202ENST00000455220 ZNF669Q96BR6 464 aaPredicted RBP16.58■□□□□ 0.24
CCDC90B-202ENST00000455220 TPSD1Q9BZJ3 242 aa16.58■□□□□ 0.24
CCDC90B-202ENST00000455220 BTBD1Q9H0C5 482 aa16.58■□□□□ 0.24
CCDC90B-202ENST00000455220 EPHX3Q9H6B9 360 aa16.58■□□□□ 0.24
CCDC90B-202ENST00000455220 PKP3Q9Y446 797 aa16.58■□□□□ 0.24
CCDC90B-202ENST00000455220 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.58■□□□□ 0.24
CCDC90B-202ENST00000455220 FAM169AQ9Y6X4 670 aa16.58■□□□□ 0.24
CCDC90B-202ENST00000455220 PLXND1Q9Y4D7 1925 aa16.58■□□□□ 0.24
CCDC90B-202ENST00000455220 TRPM6Q9BX84 2022 aa16.58■□□□□ 0.24
CCDC90B-202ENST00000455220 CCDC163A0A0D9SF12 145 aa16.57■□□□□ 0.24
CCDC90B-202ENST00000455220 CCDC78A2IDD5 438 aa16.57■□□□□ 0.24
CCDC90B-202ENST00000455220 RGSL1A5PLK6 1076 aa16.57■□□□□ 0.24
CCDC90B-202ENST00000455220 H7C0S8 307 aa16.57■□□□□ 0.24
CCDC90B-202ENST00000455220 SPAG6O75602 509 aa16.57■□□□□ 0.24
CCDC90B-202ENST00000455220 SLC4A1P02730 911 aa16.57■□□□□ 0.24
CCDC90B-202ENST00000455220 C6P13671 934 aa16.57■□□□□ 0.24
CCDC90B-202ENST00000455220 OXTRP30559 389 aa16.57■□□□□ 0.24
CCDC90B-202ENST00000455220 SPINT3P49223 89 aa16.57■□□□□ 0.24
CCDC90B-202ENST00000455220 UBAP2Q5T6F2 1119 aaKnown RBP16.57■□□□□ 0.24
CCDC90B-202ENST00000455220 KIAA0930Q6ICG6 404 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms