RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 TCP1P17987 556 aaKnown RBP28.01■■■□□ 2.07
SMARCC1-203ENST00000454240 PFN3P60673 137 aa28.01■■■□□ 2.07
SMARCC1-203ENST00000454240 IRF4Q15306 451 aa28.01■■■□□ 2.07
SMARCC1-203ENST00000454240 HLA-BQ31612 363 aa28.01■■■□□ 2.07
SMARCC1-203ENST00000454240 STPG1Q5TH74 334 aa28.01■■■□□ 2.07
SMARCC1-203ENST00000454240 CCDC70Q6NSX1 233 aa28.01■■■□□ 2.07
SMARCC1-203ENST00000454240 Q6ZSR6 202 aa28.01■■■□□ 2.07
SMARCC1-203ENST00000454240 SPATS2Q86XZ4 545 aaKnown RBP28.01■■■□□ 2.07
SMARCC1-203ENST00000454240 IPMKQ8NFU5 416 aa28.01■■■□□ 2.07
SMARCC1-203ENST00000454240 OR2I1PQ8NGU4 316 aa28.01■■■□□ 2.07
SMARCC1-203ENST00000454240 NAP1L3Q99457 506 aaPredicted RBP28.01■■■□□ 2.07
SMARCC1-203ENST00000454240 NAPGQ99747 312 aaPredicted RBP28.01■■■□□ 2.07
SMARCC1-203ENST00000454240 MAGEE1Q9HCI5 957 aa28.01■■■□□ 2.07
SMARCC1-203ENST00000454240 KCTD5Q9NXV2 234 aa28.01■■■□□ 2.07
SMARCC1-203ENST00000454240 PGRMC1O00264 195 aaKnown RBP28■■■□□ 2.07
SMARCC1-203ENST00000454240 ZNF185O15231 689 aa28■■■□□ 2.07
SMARCC1-203ENST00000454240 CLDN7O95471 211 aa28■■■□□ 2.07
SMARCC1-203ENST00000454240 RABIFP47224 123 aa28■■■□□ 2.07
SMARCC1-203ENST00000454240 SLC1A5Q15758 541 aa28■■■□□ 2.07
SMARCC1-203ENST00000454240 ZNF423Q2M1K9 1284 aa28■■■□□ 2.07
SMARCC1-203ENST00000454240 DENND2CQ68D51 928 aa28■■■□□ 2.07
SMARCC1-203ENST00000454240 TECPR1Q7Z6L1 1165 aa28■■■□□ 2.07
SMARCC1-203ENST00000454240 RAVER1Q8IY67 606 aaKnown RBP28■■■□□ 2.07
SMARCC1-203ENST00000454240 NETO1Q8TDF5 533 aa28■■■□□ 2.07
SMARCC1-203ENST00000454240 DTD2Q96FN9 168 aa28■■■□□ 2.07
SMARCC1-203ENST00000454240 GAREM1Q9H706 876 aa28■■■□□ 2.07
SMARCC1-203ENST00000454240 DNAAF2Q9NVR5 837 aaKnown RBP28■■■□□ 2.07
SMARCC1-203ENST00000454240 FANCGO15287 622 aa27.99■■■□□ 2.07
SMARCC1-203ENST00000454240 CER1O95813 267 aa27.99■■■□□ 2.07
SMARCC1-203ENST00000454240 C1SP09871 688 aa27.99■■■□□ 2.07
SMARCC1-203ENST00000454240 ADRA1AP35348 466 aa27.99■■■□□ 2.07
SMARCC1-203ENST00000454240 STC1P52823 247 aa27.99■■■□□ 2.07
SMARCC1-203ENST00000454240 SIRPB2Q5JXA9 342 aa27.99■■■□□ 2.07
SMARCC1-203ENST00000454240 RANBP10Q6VN20 620 aa27.99■■■□□ 2.07
SMARCC1-203ENST00000454240 KDM7AQ6ZMT4 941 aa27.99■■■□□ 2.07
SMARCC1-203ENST00000454240 Q6ZVL8 140 aa27.99■■■□□ 2.07
SMARCC1-203ENST00000454240 DCP2Q8IU60 420 aaKnown RBP27.99■■■□□ 2.07
SMARCC1-203ENST00000454240 SLC22A18ASQ8N1D0 253 aa27.99■■■□□ 2.07
SMARCC1-203ENST00000454240 ERVMER34-1Q9H9K5 563 aa27.99■■■□□ 2.07
SMARCC1-203ENST00000454240 IL21RQ9HBE5 538 aa27.99■■■□□ 2.07
SMARCC1-203ENST00000454240 GDF3Q9NR23 364 aa27.99■■■□□ 2.07
SMARCC1-203ENST00000454240 SMARCAL1Q9NZC9 954 aa27.99■■■□□ 2.07
SMARCC1-203ENST00000454240 C1orf232A0A0U1RR37 186 aa27.98■■■□□ 2.07
SMARCC1-203ENST00000454240 CTAGE9A4FU28 777 aa27.98■■■□□ 2.07
SMARCC1-203ENST00000454240 GOLGA8CPA6NN73 597 aa27.98■■■□□ 2.07
SMARCC1-203ENST00000454240 C4orf47A7E2U8 309 aa27.98■■■□□ 2.07
SMARCC1-203ENST00000454240 TOR1BO14657 336 aa27.98■■■□□ 2.07
SMARCC1-203ENST00000454240 AGTP01019 485 aa27.98■■■□□ 2.07
SMARCC1-203ENST00000454240 IFNB1P01574 187 aa27.98■■■□□ 2.07
SMARCC1-203ENST00000454240 HLA-DPA1P20036 260 aa27.98■■■□□ 2.07
SMARCC1-203ENST00000454240 ETV3P41162 512 aa27.98■■■□□ 2.07
SMARCC1-203ENST00000454240 CHRNA4P43681 627 aa27.98■■■□□ 2.07
SMARCC1-203ENST00000454240 TNNT3P45378 269 aaPredicted RBP27.98■■■□□ 2.07
SMARCC1-203ENST00000454240 KCNJ1P48048 391 aa27.98■■■□□ 2.07
SMARCC1-203ENST00000454240 YPEL5P62699 121 aa27.98■■■□□ 2.07
SMARCC1-203ENST00000454240 KCTD11Q693B1 232 aa27.98■■■□□ 2.07
SMARCC1-203ENST00000454240 PTAR1Q7Z6K3 402 aaPredicted RBP27.98■■■□□ 2.07
SMARCC1-203ENST00000454240 NUS1Q96E22 293 aa27.98■■■□□ 2.07
SMARCC1-203ENST00000454240 SRPK1Q96SB4 655 aaKnown RBP27.98■■■□□ 2.07
SMARCC1-203ENST00000454240 FSD1LQ9BXM9 530 aa27.98■■■□□ 2.07
SMARCC1-203ENST00000454240 DFNA5O60443 496 aa27.97■■■□□ 2.07
SMARCC1-203ENST00000454240 PIRTP0C851 137 aa27.97■■■□□ 2.07
SMARCC1-203ENST00000454240 MTM1Q13496 603 aa27.97■■■□□ 2.07
SMARCC1-203ENST00000454240 INPP5AQ14642 412 aa27.97■■■□□ 2.07
SMARCC1-203ENST00000454240 CYP1B1Q16678 543 aa27.97■■■□□ 2.07
SMARCC1-203ENST00000454240 ESRP1Q6NXG1 681 aaKnown RBP27.97■■■□□ 2.07
SMARCC1-203ENST00000454240 RFLNAQ6ZTI6 216 aa27.97■■■□□ 2.07
SMARCC1-203ENST00000454240 SLC25A41Q8N5S1 370 aa27.97■■■□□ 2.07
SMARCC1-203ENST00000454240 GLIS1Q8NBF1 620 aa27.97■■■□□ 2.07
SMARCC1-203ENST00000454240 PLA2G15Q8NCC3 412 aa27.97■■■□□ 2.07
SMARCC1-203ENST00000454240 EID2BQ96D98 161 aa27.97■■■□□ 2.07
SMARCC1-203ENST00000454240 FICDQ9BVA6 458 aa27.97■■■□□ 2.07
SMARCC1-203ENST00000454240 AP1M1Q9BXS5 423 aa27.97■■■□□ 2.07
SMARCC1-203ENST00000454240 ASCC3Q8N3C0 2202 aaKnown RBP27.97■■■□□ 2.07
SMARCC1-203ENST00000454240 PCCBP05166 539 aa27.96■■■□□ 2.07
SMARCC1-203ENST00000454240 FGF1P05230 155 aa27.96■■■□□ 2.07
SMARCC1-203ENST00000454240 ETS1P14921 441 aa27.96■■■□□ 2.07
SMARCC1-203ENST00000454240 HS1BP3Q53T59 392 aa27.96■■■□□ 2.07
SMARCC1-203ENST00000454240 LYSMD3Q7Z3D4 306 aa27.96■■■□□ 2.07
SMARCC1-203ENST00000454240 TMC3Q7Z5M5 1100 aa27.96■■■□□ 2.07
SMARCC1-203ENST00000454240 PRUNE1Q86TP1 453 aa27.96■■■□□ 2.07
SMARCC1-203ENST00000454240 CCHCR1Q8TD31 782 aa27.96■■■□□ 2.07
SMARCC1-203ENST00000454240 ELF4Q99607 663 aaPredicted RBP27.96■■■□□ 2.07
SMARCC1-203ENST00000454240 ZFYVE1Q9HBF4 777 aa27.96■■■□□ 2.07
SMARCC1-203ENST00000454240 FNDC3AQ9Y2H6 1198 aaKnown RBP27.96■■■□□ 2.07
SMARCC1-203ENST00000454240 ZNF711Q9Y462 761 aa27.96■■■□□ 2.07
SMARCC1-203ENST00000454240 SPO11Q9Y5K1 396 aa27.96■■■□□ 2.07
SMARCC1-203ENST00000454240 SAR1BQ9Y6B6 198 aa27.96■■■□□ 2.07
SMARCC1-203ENST00000454240 SCN8AQ9UQD0 1980 aa27.96■■■□□ 2.07
SMARCC1-203ENST00000454240 GOLGA6CA6NDK9 693 aa27.95■■■□□ 2.06
SMARCC1-203ENST00000454240 GOLGA6BA6NDN3 693 aa27.95■■■□□ 2.06
SMARCC1-203ENST00000454240 ZNF883P0CG24 379 aa27.95■■■□□ 2.06
SMARCC1-203ENST00000454240 GOLGA6DP0CG33 693 aa27.95■■■□□ 2.06
SMARCC1-203ENST00000454240 ACTN2P35609 894 aa27.95■■■□□ 2.06
SMARCC1-203ENST00000454240 TRIM23P36406 574 aa27.95■■■□□ 2.06
SMARCC1-203ENST00000454240 ETF1P62495 437 aaKnown RBP27.95■■■□□ 2.06
SMARCC1-203ENST00000454240 DPTQ07507 201 aa27.95■■■□□ 2.06
SMARCC1-203ENST00000454240 OLIG2Q13516 323 aa27.95■■■□□ 2.06
SMARCC1-203ENST00000454240 PRAMEF14Q5SWL7 426 aa27.95■■■□□ 2.06
SMARCC1-203ENST00000454240 TPRG1LQ5T0D9 272 aa27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms