RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 FAM181AQ8N9Y4 354 aa18.1■□□□□ 0.49
SQSTM1-204ENST00000453046 TP53I13Q8NBR0 393 aaPredicted RBP18.1■□□□□ 0.49
SQSTM1-204ENST00000453046 HNRNPLLQ8WVV9 542 aaKnown RBP18.1■□□□□ 0.49
SQSTM1-204ENST00000453046 SLC13A1Q9BZW2 595 aa18.1■□□□□ 0.49
SQSTM1-204ENST00000453046 ABCG4Q9H172 646 aa18.1■□□□□ 0.49
SQSTM1-204ENST00000453046 USP29Q9HBJ7 922 aa18.1■□□□□ 0.49
SQSTM1-204ENST00000453046 KLF15Q9UIH9 416 aa18.1■□□□□ 0.49
SQSTM1-204ENST00000453046 TSPAN11A1L157 253 aa18.09■□□□□ 0.49
SQSTM1-204ENST00000453046 EFCAB8A8MWE9 144 aa18.09■□□□□ 0.49
SQSTM1-204ENST00000453046 MT-CO3P00414 261 aa18.09■□□□□ 0.49
SQSTM1-204ENST00000453046 PRKCGP05129 697 aa18.09■□□□□ 0.49
SQSTM1-204ENST00000453046 C6P13671 934 aa18.09■□□□□ 0.49
SQSTM1-204ENST00000453046 LIG3P49916 1009 aa18.09■□□□□ 0.49
SQSTM1-204ENST00000453046 SCNN1BP51168 640 aa18.09■□□□□ 0.49
SQSTM1-204ENST00000453046 RENBPP51606 427 aa18.09■□□□□ 0.49
SQSTM1-204ENST00000453046 SEMG2Q02383 582 aa18.09■□□□□ 0.49
SQSTM1-204ENST00000453046 C2orf54Q08AI8 447 aa18.09■□□□□ 0.49
SQSTM1-204ENST00000453046 NSUN2Q08J23 767 aaKnown RBP eCLIP18.09■□□□□ 0.49
SQSTM1-204ENST00000453046 DPYSQ14117 519 aa18.09■□□□□ 0.49
SQSTM1-204ENST00000453046 IRF4Q15306 451 aa18.09■□□□□ 0.49
SQSTM1-204ENST00000453046 SIX1Q15475 284 aaPredicted RBP18.09■□□□□ 0.49
SQSTM1-204ENST00000453046 CYP1B1Q16678 543 aa18.09■□□□□ 0.49
SQSTM1-204ENST00000453046 DEFB133Q30KQ1 61 aa18.09■□□□□ 0.49
SQSTM1-204ENST00000453046 PRRT3Q5FWE3 981 aa18.09■□□□□ 0.49
SQSTM1-204ENST00000453046 TMCO3Q6UWJ1 677 aa18.09■□□□□ 0.49
SQSTM1-204ENST00000453046 MACC1Q6ZN28 852 aa18.09■□□□□ 0.49
SQSTM1-204ENST00000453046 PHACTR4Q8IZ21 702 aa18.09■□□□□ 0.49
SQSTM1-204ENST00000453046 RBFAQ8N0V3 343 aa18.09■□□□□ 0.49
SQSTM1-204ENST00000453046 CACTIN-AS1Q8N1I8 211 aa18.09■□□□□ 0.49
SQSTM1-204ENST00000453046 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.09■□□□□ 0.49
SQSTM1-204ENST00000453046 CSPG4P5Q96PW8 444 aa18.09■□□□□ 0.49
SQSTM1-204ENST00000453046 RNF157Q96PX1 679 aa18.09■□□□□ 0.49
SQSTM1-204ENST00000453046 HERPUD2Q9BSE4 406 aa18.09■□□□□ 0.49
SQSTM1-204ENST00000453046 FRMD8P1Q9BZ68 369 aaPredicted RBP18.09■□□□□ 0.49
SQSTM1-204ENST00000453046 NRSN2Q9GZP1 204 aa18.09■□□□□ 0.49
SQSTM1-204ENST00000453046 HOMER3Q9NSC5 361 aa18.09■□□□□ 0.49
SQSTM1-204ENST00000453046 NCKIPSDQ9NZQ3 722 aa18.09■□□□□ 0.49
SQSTM1-204ENST00000453046 SEPT3Q9UH03 358 aa18.09■□□□□ 0.49
SQSTM1-204ENST00000453046 ATP8A1Q9Y2Q0 1164 aa18.09■□□□□ 0.49
SQSTM1-204ENST00000453046 URB1O60287 2271 aaKnown RBP18.09■□□□□ 0.49
SQSTM1-204ENST00000453046 PHF2O75151 1096 aa18.08■□□□□ 0.48
SQSTM1-204ENST00000453046 GP1BAP07359 652 aa18.08■□□□□ 0.48
SQSTM1-204ENST00000453046 KRT10P13645 584 aa18.08■□□□□ 0.48
SQSTM1-204ENST00000453046 AMPD1P23109 780 aa18.08■□□□□ 0.48
SQSTM1-204ENST00000453046 HTR1BP28222 390 aa18.08■□□□□ 0.48
SQSTM1-204ENST00000453046 POLR2LP62875 67 aaKnown RBP18.08■□□□□ 0.48
SQSTM1-204ENST00000453046 PPARDQ03181 441 aa18.08■□□□□ 0.48
SQSTM1-204ENST00000453046 C1orf61Q13536 156 aa18.08■□□□□ 0.48
SQSTM1-204ENST00000453046 ZNF235Q14590 738 aa18.08■□□□□ 0.48
SQSTM1-204ENST00000453046 LBRQ14739 615 aaKnown RBP18.08■□□□□ 0.48
SQSTM1-204ENST00000453046 ANKRD20A8PQ5CZ79 823 aa18.08■□□□□ 0.48
SQSTM1-204ENST00000453046 TMCO4Q5TGY1 634 aa18.08■□□□□ 0.48
SQSTM1-204ENST00000453046 RFX6Q8HWS3 928 aa18.08■□□□□ 0.48
SQSTM1-204ENST00000453046 DCBLD1Q8N8Z6 715 aa18.08■□□□□ 0.48
SQSTM1-204ENST00000453046 TTC13Q8NBP0 860 aa18.08■□□□□ 0.48
SQSTM1-204ENST00000453046 LRRN4CLQ8ND94 238 aa18.08■□□□□ 0.48
SQSTM1-204ENST00000453046 MYRIPQ8NFW9 859 aa18.08■□□□□ 0.48
SQSTM1-204ENST00000453046 IFI44Q8TCB0 444 aa18.08■□□□□ 0.48
SQSTM1-204ENST00000453046 GLMNQ92990 594 aa18.08■□□□□ 0.48
SQSTM1-204ENST00000453046 RUNDC3BQ96NL0 473 aa18.08■□□□□ 0.48
SQSTM1-204ENST00000453046 DCBLD2Q96PD2 775 aa18.08■□□□□ 0.48
SQSTM1-204ENST00000453046 MAK16Q9BXY0 300 aaKnown RBP18.08■□□□□ 0.48
SQSTM1-204ENST00000453046 TCEAL2Q9H3H9 227 aaPredicted RBP18.08■□□□□ 0.48
SQSTM1-204ENST00000453046 DOLKQ9UPQ8 538 aa18.08■□□□□ 0.48
SQSTM1-204ENST00000453046 ZFYVE26Q68DK2 2539 aa18.08■□□□□ 0.48
SQSTM1-204ENST00000453046 TCRBV7S2A1N4TA0A589 114 aa18.07■□□□□ 0.48
SQSTM1-204ENST00000453046 CPED1A4D0V7 1026 aa18.07■□□□□ 0.48
SQSTM1-204ENST00000453046 TPP1O14773 563 aa18.07■□□□□ 0.48
SQSTM1-204ENST00000453046 APOL1O14791 398 aa18.07■□□□□ 0.48
SQSTM1-204ENST00000453046 OPA1O60313 960 aa18.07■□□□□ 0.48
SQSTM1-204ENST00000453046 ANXA6P08133 673 aa18.07■□□□□ 0.48
SQSTM1-204ENST00000453046 ZFXP17010 805 aaPredicted RBP18.07■□□□□ 0.48
SQSTM1-204ENST00000453046 TGM2P21980 687 aa18.07■□□□□ 0.48
SQSTM1-204ENST00000453046 IL4RP24394 825 aa18.07■□□□□ 0.48
SQSTM1-204ENST00000453046 MMP12P39900 470 aa18.07■□□□□ 0.48
SQSTM1-204ENST00000453046 FNTAP49354 379 aa18.07■□□□□ 0.48
SQSTM1-204ENST00000453046 BLKP51451 505 aa18.07■□□□□ 0.48
SQSTM1-204ENST00000453046 AP1S1P61966 158 aa18.07■□□□□ 0.48
SQSTM1-204ENST00000453046 MMRN1Q13201 1228 aa18.07■□□□□ 0.48
SQSTM1-204ENST00000453046 CDKN3Q16667 212 aa18.07■□□□□ 0.48
SQSTM1-204ENST00000453046 WSCD2Q2TBF2 565 aa18.07■□□□□ 0.48
SQSTM1-204ENST00000453046 COL28A1Q2UY09 1125 aa18.07■□□□□ 0.48
SQSTM1-204ENST00000453046 KAZNQ674X7 775 aa18.07■□□□□ 0.48
SQSTM1-204ENST00000453046 SLC9A4Q6AI14 798 aa18.07■□□□□ 0.48
SQSTM1-204ENST00000453046 ZSWIM9Q86XI8 627 aa18.07■□□□□ 0.48
SQSTM1-204ENST00000453046 TP53INP2Q8IXH6 220 aa18.07■□□□□ 0.48
SQSTM1-204ENST00000453046 BBS5Q8N3I7 341 aa18.07■□□□□ 0.48
SQSTM1-204ENST00000453046 MMGT1Q8N4V1 131 aa18.07■□□□□ 0.48
SQSTM1-204ENST00000453046 PRELID2Q8N945 189 aa18.07■□□□□ 0.48
SQSTM1-204ENST00000453046 MAPK15Q8TD08 544 aa18.07■□□□□ 0.48
SQSTM1-204ENST00000453046 NSMCE1Q8WV22 266 aa18.07■□□□□ 0.48
SQSTM1-204ENST00000453046 ZNF599Q96NL3 588 aa18.07■□□□□ 0.48
SQSTM1-204ENST00000453046 PSKH2Q96QS6 385 aa18.07■□□□□ 0.48
SQSTM1-204ENST00000453046 HEMGNQ9BXL5 484 aa18.07■□□□□ 0.48
SQSTM1-204ENST00000453046 AP1M1Q9BXS5 423 aa18.07■□□□□ 0.48
SQSTM1-204ENST00000453046 ETNK2Q9NVF9 386 aa18.07■□□□□ 0.48
SQSTM1-204ENST00000453046 LY6G6EA0A0G2JKS1 128 aa18.06■□□□□ 0.48
SQSTM1-204ENST00000453046 APOC4-APOC2K7ER74 178 aa18.06■□□□□ 0.48
SQSTM1-204ENST00000453046 MUSKO15146 869 aa18.06■□□□□ 0.48
SQSTM1-204ENST00000453046 CST8O60676 142 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms