RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 VPS18Q9P253 973 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 TRPS1Q9UHF7 1281 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 GABRQQ9UN88 632 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 ZBTB1Q9Y2K1 713 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 SIT1Q9Y3P8 196 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 TNIKQ9UKE5 1360 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 MAP3K19Q56UN5 1328 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 C15orf38-AP3S2A0A0A6YYH1 394 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 SERTM2A0A1B0GWG4 89 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 A0A1W2PQF6 199 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 ELOVL7A1L3X0 281 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 LRRC53A6NM62 1247 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 NDUFS8O00217 210 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 PER2O15055 1255 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 CLIC2O15247 247 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 CLDN3O15551 220 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 TEX33O43247 280 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 HSF2BPO75031 334 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 ZBTB7AO95365 584 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 TRUB2O95900 331 aaKnown RBP4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 KRT6BP04259 564 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 RLN1P04808 185 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 VIMP08670 466 aaKnown RBP4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 ZNF853P0CG23 659 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 ZNF3P17036 446 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 CYP2A7P20853 494 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 CALB2P22676 271 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 GUCY1A2P33402 732 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 BMI1P35226 326 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 PTPN7P35236 360 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 PTGER3P43115 390 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 PCP4P48539 62 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 KRT6CP48668 564 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 UBE2HP62256 183 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 CTAG1AP78358 180 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 SPIBQ01892 262 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 GCNT1Q02742 428 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 CUL1Q13616 776 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 PGM5Q15124 567 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 C19orf54Q5BKX5 351 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 CRB2Q5IJ48 1285 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 KRT79Q5XKE5 535 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 FAM91A1Q658Y4 838 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 JADE1Q6IE81 842 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 OR6B2Q6IFH4 312 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 MIS18BP1Q6P0N0 1132 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 MSANTD2Q6P1R3 559 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 TSSK4Q6SA08 328 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 MTSS1LQ765P7 747 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 GSTA5Q7RTV2 222 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 TADA2BQ86TJ2 420 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 GAS2L3Q86XJ1 694 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 ZNF573Q86YE8 665 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 PLXDC1Q8IUK5 500 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 KRT222Q8N1A0 295 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 PLD5Q8N7P1 536 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 SLC24A4Q8NFF2 622 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 OR5AN1Q8NGI8 311 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 ACTRT2Q8TDY3 377 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 CACTINQ8WUQ7 758 aaKnown RBP4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 CASKIN2Q8WXE0 1202 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 CNOT9Q92600 299 aaKnown RBP4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 SYN2Q92777 582 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 GTF3C6Q969F1 213 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 PPP2R3CQ969Q6 453 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 LRRC39Q96DD0 335 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 ELMOD3Q96FG2 381 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 PRR11Q96HE9 360 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 LRIG1Q96JA1 1093 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 ARL5BQ96KC2 179 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 PWWP2AQ96N64 755 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 CATSPER2Q96P56 530 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 NUDCD1Q96RS6 583 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 USP28Q96RU2 1077 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 EIF3CQ99613 913 aaKnown RBP4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 SPATA5L1Q9BVQ7 753 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 AMNQ9BXJ7 453 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 SLC46A2Q9BY10 475 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 IFIH1Q9BYX4 1025 aaKnown RBP4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 GPR61Q9BZJ8 451 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 KCNH6Q9H252 994 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 PLK3Q9H4B4 646 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 EPHX3Q9H6B9 360 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 RMND5AQ9H871 391 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 PARVGQ9HBI0 331 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 GPN1Q9HCN4 374 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 PPANQ9NQ55 473 aaKnown RBP4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 TLR9Q9NR96 1032 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 FAM212BQ9NTI7 297 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 HAO2Q9NYQ3 351 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 GDE1Q9NZC3 331 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 HDAC6Q9UBN7 1215 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 HEY2Q9UBP5 337 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 DNAI1Q9UI46 699 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 CD207Q9UJ71 328 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 TRMT6Q9UJA5 497 aaKnown RBP4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 NUDCQ9Y266 331 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 CARD8Q9Y2G2 431 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 R3HDM2Q9Y2K5 976 aaKnown RBP4.47□□□□□ -1.69
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