RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 TERF1P54274 439 aa11.59□□□□□ -0.55
SCN9A-204ENST00000452182 PTPRRQ15256 657 aa11.59□□□□□ -0.55
SCN9A-204ENST00000452182 TAF1AQ15573 450 aaPredicted RBP11.59□□□□□ -0.55
SCN9A-204ENST00000452182 LYSMD3Q7Z3D4 306 aa11.59□□□□□ -0.55
SCN9A-204ENST00000452182 CYP2U1Q7Z449 544 aa11.59□□□□□ -0.55
SCN9A-204ENST00000452182 GLT6D1Q7Z4J2 308 aa11.59□□□□□ -0.55
SCN9A-204ENST00000452182 TSPAN33Q86UF1 283 aa11.59□□□□□ -0.55
SCN9A-204ENST00000452182 TTC30BQ8N4P2 665 aa11.59□□□□□ -0.55
SCN9A-204ENST00000452182 BLOC1S5Q8TDH9 187 aa11.59□□□□□ -0.55
SCN9A-204ENST00000452182 RUBCNQ92622 972 aa11.59□□□□□ -0.55
SCN9A-204ENST00000452182 PEX13Q92968 403 aa11.59□□□□□ -0.55
SCN9A-204ENST00000452182 GPR174Q9BXC1 333 aa11.59□□□□□ -0.55
SCN9A-204ENST00000452182 C1QTNF2Q9BXJ5 285 aa11.59□□□□□ -0.55
SCN9A-204ENST00000452182 FOXP3Q9BZS1 431 aa11.59□□□□□ -0.55
SCN9A-204ENST00000452182 PHACTR1Q9C0D0 580 aa11.59□□□□□ -0.55
SCN9A-204ENST00000452182 DUSP15Q9H1R2 295 aaPredicted RBP11.59□□□□□ -0.55
SCN9A-204ENST00000452182 NPDC1Q9NQX5 325 aaPredicted RBP11.59□□□□□ -0.55
SCN9A-204ENST00000452182 GDF3Q9NR23 364 aa11.59□□□□□ -0.55
SCN9A-204ENST00000452182 CUL9Q8IWT3 2517 aa11.59□□□□□ -0.55
SCN9A-204ENST00000452182 A0A1W2PQU0 124 aa11.58□□□□□ -0.56
SCN9A-204ENST00000452182 ESYT3A0FGR9 886 aa11.58□□□□□ -0.56
SCN9A-204ENST00000452182 MROH6A6NGR9 719 aa11.58□□□□□ -0.56
SCN9A-204ENST00000452182 FAM47DPA6NHR8 397 aa11.58□□□□□ -0.56
SCN9A-204ENST00000452182 C2orf81A6NN90 581 aa11.58□□□□□ -0.56
SCN9A-204ENST00000452182 METTL12A8MUP2 240 aa11.58□□□□□ -0.56
SCN9A-204ENST00000452182 GOLGA8MH3BSY2 632 aa11.58□□□□□ -0.56
SCN9A-204ENST00000452182 HRO43593 1189 aa11.58□□□□□ -0.56
SCN9A-204ENST00000452182 LDB2O43679 373 aa11.58□□□□□ -0.56
SCN9A-204ENST00000452182 TM7SF2O76062 418 aa11.58□□□□□ -0.56
SCN9A-204ENST00000452182 CLDN7O95471 211 aa11.58□□□□□ -0.56
SCN9A-204ENST00000452182 C6P13671 934 aa11.58□□□□□ -0.56
SCN9A-204ENST00000452182 TPH1P17752 444 aa11.58□□□□□ -0.56
SCN9A-204ENST00000452182 ADRA1DP25100 572 aa11.58□□□□□ -0.56
SCN9A-204ENST00000452182 PSMA3P25788 255 aa11.58□□□□□ -0.56
SCN9A-204ENST00000452182 SEMG2Q02383 582 aa11.58□□□□□ -0.56
SCN9A-204ENST00000452182 RPL6Q02878 288 aaKnown RBP11.58□□□□□ -0.56
SCN9A-204ENST00000452182 CUL1Q13616 776 aa11.58□□□□□ -0.56
SCN9A-204ENST00000452182 TRADDQ15628 312 aa11.58□□□□□ -0.56
SCN9A-204ENST00000452182 PCID2Q5JVF3 399 aa11.58□□□□□ -0.56
SCN9A-204ENST00000452182 TEX35Q5T0J7 233 aa11.58□□□□□ -0.56
SCN9A-204ENST00000452182 CERCAMQ5T4B2 595 aa11.58□□□□□ -0.56
SCN9A-204ENST00000452182 KIAA0895LQ68EN5 471 aa11.58□□□□□ -0.56
SCN9A-204ENST00000452182 ZDHHC24Q6UX98 284 aa11.58□□□□□ -0.56
SCN9A-204ENST00000452182 NLRP9Q7RTR0 991 aa11.58□□□□□ -0.56
SCN9A-204ENST00000452182 TECPR1Q7Z6L1 1165 aa11.58□□□□□ -0.56
SCN9A-204ENST00000452182 IFT20Q8IY31 132 aa11.58□□□□□ -0.56
SCN9A-204ENST00000452182 PDIK1LQ8N165 341 aa11.58□□□□□ -0.56
SCN9A-204ENST00000452182 ZCCHC9Q8N567 271 aaKnown RBP11.58□□□□□ -0.56
SCN9A-204ENST00000452182 EIF1ADQ8N9N8 165 aaKnown RBP11.58□□□□□ -0.56
SCN9A-204ENST00000452182 FOXJ1Q92949 421 aa11.58□□□□□ -0.56
SCN9A-204ENST00000452182 EID2BQ96D98 161 aa11.58□□□□□ -0.56
SCN9A-204ENST00000452182 ZC3H10Q96K80 434 aaKnown RBP11.58□□□□□ -0.56
SCN9A-204ENST00000452182 COQ10AQ96MF6 247 aa11.58□□□□□ -0.56
SCN9A-204ENST00000452182 WRAP53Q9BUR4 548 aaKnown RBP11.58□□□□□ -0.56
SCN9A-204ENST00000452182 GPR63Q9BZJ6 419 aa11.58□□□□□ -0.56
SCN9A-204ENST00000452182 CDH19Q9H159 772 aa11.58□□□□□ -0.56
SCN9A-204ENST00000452182 KCNH6Q9H252 994 aa11.58□□□□□ -0.56
SCN9A-204ENST00000452182 C6orf106Q9H6K1 298 aaPredicted RBP11.58□□□□□ -0.56
SCN9A-204ENST00000452182 ZDHHC18Q9NUE0 388 aa11.58□□□□□ -0.56
SCN9A-204ENST00000452182 PIH1D1Q9NWS0 290 aaKnown RBP11.58□□□□□ -0.56
SCN9A-204ENST00000452182 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.58□□□□□ -0.56
SCN9A-204ENST00000452182 NFKBIL1Q9UBC1 381 aaPredicted RBP11.58□□□□□ -0.56
SCN9A-204ENST00000452182 RIMKLBQ9ULI2 386 aa11.58□□□□□ -0.56
SCN9A-204ENST00000452182 ZFR2Q9UPR6 939 aaKnown RBP11.58□□□□□ -0.56
SCN9A-204ENST00000452182 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.58□□□□□ -0.56
SCN9A-204ENST00000452182 TRPM6Q9BX84 2022 aa11.58□□□□□ -0.56
SCN9A-204ENST00000452182 ZNF106Q9H2Y7 1883 aaKnown RBP11.58□□□□□ -0.56
SCN9A-204ENST00000452182 MAGEB16A2A368 324 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 HEATR9A2RTY3 570 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 IGLON5A6NGN9 336 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 SDR42E2A6NKP2 422 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 A8MX80 341 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 E7ESA3 106 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 AURKAO14965 403 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 MMP20O60882 483 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 AVILO75366 819 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 IGHV4-34P06331 123 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 RHOXF2BP0C7M4 288 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 GM2AP17900 193 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 BCKDHBP21953 392 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 LPOP22079 712 aaPredicted RBP11.57□□□□□ -0.56
SCN9A-204ENST00000452182 PLTPP55058 493 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 ARL4CP56559 192 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 PPP2CBP62714 309 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 PPP2CAP67775 309 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 POU6F1Q14863 301 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 HIF1AQ16665 826 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 ZNF284Q2VY69 593 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 ZDHHC20Q5W0Z9 365 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 SEL1L3Q68CR1 1132 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 NLRP8Q86W28 1048 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 NRSN1Q8IZ57 195 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 FBXO25Q8TCJ0 367 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 BIRC7Q96CA5 298 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 LRRC39Q96DD0 335 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 RHOXF2Q9BQY4 288 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 KIFC1Q9BW19 673 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 SLC17A9Q9BYT1 436 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 MRM3Q9HC36 420 aaKnown RBP11.57□□□□□ -0.56
SCN9A-204ENST00000452182 RAD18Q9NS91 495 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms