RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 POLR1EQ9GZS1 481 aaKnown RBP12.49□□□□□ -0.41
CPSF4-208ENST00000452047 TSPY26PQ9H489 355 aa12.49□□□□□ -0.41
CPSF4-208ENST00000452047 DEF6Q9H4E7 631 aa12.49□□□□□ -0.41
CPSF4-208ENST00000452047 MRPL40Q9NQ50 206 aaKnown RBP12.49□□□□□ -0.41
CPSF4-208ENST00000452047 PADI4Q9UM07 663 aa12.49□□□□□ -0.41
CPSF4-208ENST00000452047 DOLKQ9UPQ8 538 aa12.49□□□□□ -0.41
CPSF4-208ENST00000452047 ARHGEF17Q96PE2 2063 aaPredicted RBP12.49□□□□□ -0.41
CPSF4-208ENST00000452047 PSMD11O00231 422 aa12.48□□□□□ -0.41
CPSF4-208ENST00000452047 NTN3O00634 580 aaPredicted RBP12.48□□□□□ -0.41
CPSF4-208ENST00000452047 MATN3O15232 486 aa12.48□□□□□ -0.41
CPSF4-208ENST00000452047 AKR1B10O60218 316 aa12.48□□□□□ -0.41
CPSF4-208ENST00000452047 MTA2O94776 668 aa12.48□□□□□ -0.41
CPSF4-208ENST00000452047 TNFP01375 233 aa12.48□□□□□ -0.41
CPSF4-208ENST00000452047 MPOP05164 745 aa12.48□□□□□ -0.41
CPSF4-208ENST00000452047 CYP2A6P11509 494 aaPredicted RBP12.48□□□□□ -0.41
CPSF4-208ENST00000452047 HOXB3P14651 431 aaPredicted RBP12.48□□□□□ -0.41
CPSF4-208ENST00000452047 KELP23276 732 aa12.48□□□□□ -0.41
CPSF4-208ENST00000452047 CCNCP24863 283 aa12.48□□□□□ -0.41
CPSF4-208ENST00000452047 NFKBIAP25963 317 aa12.48□□□□□ -0.41
CPSF4-208ENST00000452047 ITPKBP27987 946 aa12.48□□□□□ -0.41
CPSF4-208ENST00000452047 ETV3P41162 512 aa12.48□□□□□ -0.41
CPSF4-208ENST00000452047 GABREP78334 506 aa12.48□□□□□ -0.41
CPSF4-208ENST00000452047 SLC10A2Q12908 348 aaPredicted RBP12.48□□□□□ -0.41
CPSF4-208ENST00000452047 IFI16Q16666 785 aaKnown RBP12.48□□□□□ -0.41
CPSF4-208ENST00000452047 TIGD7Q6NT04 549 aaPredicted RBP12.48□□□□□ -0.41
CPSF4-208ENST00000452047 RBM44Q6ZP01 1051 aaKnown RBP12.48□□□□□ -0.41
CPSF4-208ENST00000452047 USP45Q70EL2 814 aa12.48□□□□□ -0.41
CPSF4-208ENST00000452047 HEATR4Q86WZ0 1026 aa12.48□□□□□ -0.41
CPSF4-208ENST00000452047 GKN2Q86XP6 184 aa12.48□□□□□ -0.41
CPSF4-208ENST00000452047 MAP7D3Q8IWC1 876 aa12.48□□□□□ -0.41
CPSF4-208ENST00000452047 SCG3Q8WXD2 468 aaKnown RBP12.48□□□□□ -0.41
CPSF4-208ENST00000452047 RAPGEF5Q92565 580 aa12.48□□□□□ -0.41
CPSF4-208ENST00000452047 FGF11Q92914 225 aa12.48□□□□□ -0.41
CPSF4-208ENST00000452047 HDAC11Q96DB2 347 aa12.48□□□□□ -0.41
CPSF4-208ENST00000452047 TEX101Q9BY14 249 aa12.48□□□□□ -0.41
CPSF4-208ENST00000452047 TMEM168Q9H0V1 697 aa12.48□□□□□ -0.41
CPSF4-208ENST00000452047 SPTLC3Q9NUV7 552 aa12.48□□□□□ -0.41
CPSF4-208ENST00000452047 ZNHIT6Q9NWK9 470 aaKnown RBP12.48□□□□□ -0.41
CPSF4-208ENST00000452047 KCTD5Q9NXV2 234 aa12.48□□□□□ -0.41
CPSF4-208ENST00000452047 DTLQ9NZJ0 730 aa12.48□□□□□ -0.41
CPSF4-208ENST00000452047 SIRPGQ9P1W8 387 aa12.48□□□□□ -0.41
CPSF4-208ENST00000452047 AMACRQ9UHK6 382 aa12.48□□□□□ -0.41
CPSF4-208ENST00000452047 RABGEF1Q9UJ41 708 aa12.48□□□□□ -0.41
CPSF4-208ENST00000452047 GPR34Q9UPC5 381 aa12.48□□□□□ -0.41
CPSF4-208ENST00000452047 ENTPD2Q9Y5L3 495 aa12.48□□□□□ -0.41
CPSF4-208ENST00000452047 RAI2Q9Y5P3 530 aa12.48□□□□□ -0.41
CPSF4-208ENST00000452047 ATRXP46100 2492 aa12.47□□□□□ -0.41
CPSF4-208ENST00000452047 A0A0U1RQS6 177 aa12.47□□□□□ -0.41
CPSF4-208ENST00000452047 PRSS38A1L453 326 aa12.47□□□□□ -0.41
CPSF4-208ENST00000452047 C3orf70A6NLC5 250 aaPredicted RBP12.47□□□□□ -0.41
CPSF4-208ENST00000452047 ZNF487B1APH4 448 aa12.47□□□□□ -0.41
CPSF4-208ENST00000452047 HLA-DQB2P05538 268 aa12.47□□□□□ -0.41
CPSF4-208ENST00000452047 MYCLP1P12525 358 aaPredicted RBP12.47□□□□□ -0.41
CPSF4-208ENST00000452047 CCNB1P14635 433 aa12.47□□□□□ -0.41
CPSF4-208ENST00000452047 CTPS1P17812 591 aa12.47□□□□□ -0.41
CPSF4-208ENST00000452047 KDELR1P24390 212 aa12.47□□□□□ -0.41
CPSF4-208ENST00000452047 ACTN2P35609 894 aa12.47□□□□□ -0.41
CPSF4-208ENST00000452047 ABCG1P45844 678 aa12.47□□□□□ -0.41
CPSF4-208ENST00000452047 LSSP48449 732 aa12.47□□□□□ -0.41
CPSF4-208ENST00000452047 DSC2Q02487 901 aa12.47□□□□□ -0.41
CPSF4-208ENST00000452047 MESDQ14696 234 aa12.47□□□□□ -0.41
CPSF4-208ENST00000452047 DENND2CQ68D51 928 aa12.47□□□□□ -0.41
CPSF4-208ENST00000452047 IGF2-ASQ6U949 168 aa12.47□□□□□ -0.41
CPSF4-208ENST00000452047 Q6ZVL8 140 aa12.47□□□□□ -0.41
CPSF4-208ENST00000452047 TECPR1Q7Z6L1 1165 aa12.47□□□□□ -0.41
CPSF4-208ENST00000452047 PLD5Q8N7P1 536 aa12.47□□□□□ -0.41
CPSF4-208ENST00000452047 RNF214Q8ND24 703 aa12.47□□□□□ -0.41
CPSF4-208ENST00000452047 GPR156Q8NFN8 814 aa12.47□□□□□ -0.41
CPSF4-208ENST00000452047 WDR48Q8TAF3 677 aa12.47□□□□□ -0.41
CPSF4-208ENST00000452047 SLC35G2Q8TBE7 412 aa12.47□□□□□ -0.41
CPSF4-208ENST00000452047 ARRDC2Q8TBH0 407 aa12.47□□□□□ -0.41
CPSF4-208ENST00000452047 LRRN4Q8WUT4 740 aa12.47□□□□□ -0.41
CPSF4-208ENST00000452047 GRAMD1AQ96CP6 724 aa12.47□□□□□ -0.41
CPSF4-208ENST00000452047 ATXN7L3BQ96GX2 97 aa12.47□□□□□ -0.41
CPSF4-208ENST00000452047 HIC2Q96JB3 615 aa12.47□□□□□ -0.41
CPSF4-208ENST00000452047 ZNF578Q96N58 590 aaPredicted RBP12.47□□□□□ -0.41
CPSF4-208ENST00000452047 RNF157Q96PX1 679 aa12.47□□□□□ -0.41
CPSF4-208ENST00000452047 SMIM14Q96QK8 99 aa12.47□□□□□ -0.41
CPSF4-208ENST00000452047 TDRD1Q9BXT4 1180 aaKnown RBP12.47□□□□□ -0.41
CPSF4-208ENST00000452047 FRMD8Q9BZ67 464 aaPredicted RBP12.47□□□□□ -0.41
CPSF4-208ENST00000452047 NHEJ1Q9H9Q4 299 aaPredicted RBP12.47□□□□□ -0.41
CPSF4-208ENST00000452047 POLR1BQ9H9Y6 1135 aa12.47□□□□□ -0.41
CPSF4-208ENST00000452047 ASCL3Q9NQ33 180 aa12.47□□□□□ -0.41
CPSF4-208ENST00000452047 RBM22Q9NW64 420 aaKnown RBP eCLIP12.47□□□□□ -0.414e-6■■■□□ 14.6
CPSF4-208ENST00000452047 GULP1Q9UBP9 304 aa12.47□□□□□ -0.41
CPSF4-208ENST00000452047 A0A0J9YYE9 177 aa12.46□□□□□ -0.41
CPSF4-208ENST00000452047 PDE2AO00408 941 aaPredicted RBP12.46□□□□□ -0.41
CPSF4-208ENST00000452047 RRP8O43159 456 aaKnown RBP12.46□□□□□ -0.41
CPSF4-208ENST00000452047 NOBOXO60393 691 aa12.46□□□□□ -0.41
CPSF4-208ENST00000452047 SOD1P00441 154 aa12.46□□□□□ -0.41
CPSF4-208ENST00000452047 PRLP01236 227 aa12.46□□□□□ -0.41
CPSF4-208ENST00000452047 TRBC1P01850 177 aa12.46□□□□□ -0.41
CPSF4-208ENST00000452047 FUCA1P04066 466 aa12.46□□□□□ -0.41
CPSF4-208ENST00000452047 CEACAM5P06731 702 aa12.46□□□□□ -0.41
CPSF4-208ENST00000452047 TPM1P09493 284 aa12.46□□□□□ -0.41
CPSF4-208ENST00000452047 MX2P20592 715 aa12.46□□□□□ -0.41
CPSF4-208ENST00000452047 CES1P23141 567 aa12.46□□□□□ -0.41
CPSF4-208ENST00000452047 TEAD1P28347 426 aa12.46□□□□□ -0.41
CPSF4-208ENST00000452047 CDK3Q00526 305 aa12.46□□□□□ -0.41
CPSF4-208ENST00000452047 DPTQ07507 201 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms