RNA–Protein interactions for RNA: ENST00000451964.5

CSNK1E-211, Transcript of casein kinase 1 epsilon, humanhuman

TSL 3

Gene CSNK1E, Length 873 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-211ENST00000451964 SAE1Q9UBE0 346 aaPredicted RBP12.36□□□□□ -0.43
CSNK1E-211ENST00000451964 REXO2Q9Y3B8 237 aaKnown RBP12.36□□□□□ -0.43
CSNK1E-211ENST00000451964 DUSP10Q9Y6W6 482 aa12.36□□□□□ -0.43
CSNK1E-211ENST00000451964 CHD6Q8TD26 2715 aa12.36□□□□□ -0.43
CSNK1E-211ENST00000451964 CELSR3Q9NYQ7 3312 aa12.36□□□□□ -0.43
CSNK1E-211ENST00000451964 ANKRD11Q6UB99 2663 aaPredicted RBP12.35□□□□□ -0.43
CSNK1E-211ENST00000451964 CFAP47Q6ZTR5 3102 aa12.35□□□□□ -0.43
CSNK1E-211ENST00000451964 PKD1L2Q7Z442 2459 aa12.35□□□□□ -0.43
CSNK1E-211ENST00000451964 PLXNB3Q9ULL4 1909 aa12.35□□□□□ -0.43
CSNK1E-211ENST00000451964 A0A0J9YYE9 177 aa12.35□□□□□ -0.43
CSNK1E-211ENST00000451964 CASC3O15234 703 aaKnown RBP12.35□□□□□ -0.43
CSNK1E-211ENST00000451964 RASGRP1O95267 797 aa12.35□□□□□ -0.43
CSNK1E-211ENST00000451964 NDUFA10O95299 355 aa12.35□□□□□ -0.43
CSNK1E-211ENST00000451964 TRBC1P01850 177 aa12.35□□□□□ -0.43
CSNK1E-211ENST00000451964 FUCA1P04066 466 aa12.35□□□□□ -0.43
CSNK1E-211ENST00000451964 HOXC4P09017 264 aaPredicted RBP12.35□□□□□ -0.43
CSNK1E-211ENST00000451964 CYP2A6P11509 494 aaPredicted RBP12.35□□□□□ -0.43
CSNK1E-211ENST00000451964 HTR1BP28222 390 aa12.35□□□□□ -0.43
CSNK1E-211ENST00000451964 KIAA1024LP59773 190 aa12.35□□□□□ -0.43
CSNK1E-211ENST00000451964 SKOR1P84550 965 aa12.35□□□□□ -0.43
CSNK1E-211ENST00000451964 E2F1Q01094 437 aa12.35□□□□□ -0.43
CSNK1E-211ENST00000451964 PTSQ03393 145 aa12.35□□□□□ -0.43
CSNK1E-211ENST00000451964 SPA17Q15506 151 aa12.35□□□□□ -0.43
CSNK1E-211ENST00000451964 CDKN3Q16667 212 aa12.35□□□□□ -0.43
CSNK1E-211ENST00000451964 PROSER1Q86XN7 944 aa12.35□□□□□ -0.43
CSNK1E-211ENST00000451964 TMTC1Q8IUR5 882 aa12.35□□□□□ -0.43
CSNK1E-211ENST00000451964 SLC35F3Q8IY50 421 aa12.35□□□□□ -0.43
CSNK1E-211ENST00000451964 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.35□□□□□ -0.43
CSNK1E-211ENST00000451964 KRT35Q92764 455 aa12.35□□□□□ -0.43
CSNK1E-211ENST00000451964 NUS1Q96E22 293 aa12.35□□□□□ -0.43
CSNK1E-211ENST00000451964 DTD2Q96FN9 168 aa12.35□□□□□ -0.43
CSNK1E-211ENST00000451964 BOCQ9BWV1 1114 aa12.35□□□□□ -0.43
CSNK1E-211ENST00000451964 CCDC86Q9H6F5 360 aaKnown RBP12.35□□□□□ -0.43
CSNK1E-211ENST00000451964 KLQ9UEF7 1012 aa12.35□□□□□ -0.43
CSNK1E-211ENST00000451964 TP53BP1Q12888 1972 aaPredicted RBP12.35□□□□□ -0.43
CSNK1E-211ENST00000451964 APC2O95996 2303 aa12.35□□□□□ -0.43
CSNK1E-211ENST00000451964 DSPP15924 2871 aaKnown RBP12.35□□□□□ -0.43
CSNK1E-211ENST00000451964 A0A0A6YYK5 440 aaPredicted RBP12.34□□□□□ -0.43
CSNK1E-211ENST00000451964 CPED1A4D0V7 1026 aa12.34□□□□□ -0.43
CSNK1E-211ENST00000451964 EME2A4GXA9 379 aaPredicted RBP12.34□□□□□ -0.43
CSNK1E-211ENST00000451964 PSMD11O00231 422 aa12.34□□□□□ -0.43
CSNK1E-211ENST00000451964 CACNB4O00305 520 aaPredicted RBP12.34□□□□□ -0.43
CSNK1E-211ENST00000451964 PSTPIP1O43586 416 aa12.34□□□□□ -0.43
CSNK1E-211ENST00000451964 OPA1O60313 960 aa12.34□□□□□ -0.43
CSNK1E-211ENST00000451964 MT-CO3P00414 261 aa12.34□□□□□ -0.43
CSNK1E-211ENST00000451964 ANXA6P08133 673 aa12.34□□□□□ -0.43
CSNK1E-211ENST00000451964 PECAM1P16284 738 aaPredicted RBP12.34□□□□□ -0.43
CSNK1E-211ENST00000451964 ZFXP17010 805 aaPredicted RBP12.34□□□□□ -0.43
CSNK1E-211ENST00000451964 CYLC1P35663 651 aaPredicted RBP12.34□□□□□ -0.43
CSNK1E-211ENST00000451964 CD86P42081 329 aa12.34□□□□□ -0.43
CSNK1E-211ENST00000451964 BLKP51451 505 aa12.34□□□□□ -0.43
CSNK1E-211ENST00000451964 CYP4F3Q08477 520 aa12.34□□□□□ -0.43
CSNK1E-211ENST00000451964 AP1B1Q10567 949 aa12.34□□□□□ -0.43
CSNK1E-211ENST00000451964 PDK1Q15118 436 aa12.34□□□□□ -0.43
CSNK1E-211ENST00000451964 C6orf132Q5T0Z8 1188 aa12.34□□□□□ -0.43
CSNK1E-211ENST00000451964 CDCP2Q5VXM1 449 aa12.34□□□□□ -0.43
CSNK1E-211ENST00000451964 LRRC66Q68CR7 880 aa12.34□□□□□ -0.43
CSNK1E-211ENST00000451964 GUSBP11Q6P575 273 aa12.34□□□□□ -0.43
CSNK1E-211ENST00000451964 SPOCD1Q6ZMY3 1216 aa12.34□□□□□ -0.43
CSNK1E-211ENST00000451964 USP45Q70EL2 814 aa12.34□□□□□ -0.43
CSNK1E-211ENST00000451964 KATNAL2Q8IYT4 538 aa12.34□□□□□ -0.43
CSNK1E-211ENST00000451964 CACTIN-AS1Q8N1I8 211 aa12.34□□□□□ -0.43
CSNK1E-211ENST00000451964 FSTL5Q8N475 847 aaPredicted RBP12.34□□□□□ -0.43
CSNK1E-211ENST00000451964 PDCD7Q8N8D1 485 aaKnown RBP12.34□□□□□ -0.43
CSNK1E-211ENST00000451964 DCBLD1Q8N8Z6 715 aa12.34□□□□□ -0.43
CSNK1E-211ENST00000451964 OR56A4Q8NGH8 313 aa12.34□□□□□ -0.43
CSNK1E-211ENST00000451964 IFI44Q8TCB0 444 aa12.34□□□□□ -0.43
CSNK1E-211ENST00000451964 PTCD2Q8WV60 388 aaKnown RBP12.34□□□□□ -0.43
CSNK1E-211ENST00000451964 ZNF830Q96NB3 372 aaPredicted RBP12.34□□□□□ -0.43
CSNK1E-211ENST00000451964 TEX101Q9BY14 249 aa12.34□□□□□ -0.43
CSNK1E-211ENST00000451964 LACRTQ9GZZ8 138 aa12.34□□□□□ -0.43
CSNK1E-211ENST00000451964 ABCG8Q9H221 673 aa12.34□□□□□ -0.43
CSNK1E-211ENST00000451964 WDR26Q9H7D7 661 aa12.34□□□□□ -0.43
CSNK1E-211ENST00000451964 USP29Q9HBJ7 922 aa12.34□□□□□ -0.43
CSNK1E-211ENST00000451964 PCDH9Q9HC56 1237 aa12.34□□□□□ -0.43
CSNK1E-211ENST00000451964 CD84Q9UIB8 345 aa12.34□□□□□ -0.43
CSNK1E-211ENST00000451964 DGKBQ9Y6T7 804 aa12.34□□□□□ -0.43
CSNK1E-211ENST00000451964 TNFRSF10CO14798 259 aa12.33□□□□□ -0.44
CSNK1E-211ENST00000451964 CST8O60676 142 aa12.33□□□□□ -0.44
CSNK1E-211ENST00000451964 ZRANB2O95218 330 aaKnown RBP eCLIP12.33□□□□□ -0.44
CSNK1E-211ENST00000451964 SOD1P00441 154 aa12.33□□□□□ -0.44
CSNK1E-211ENST00000451964 TNFP01375 233 aa12.33□□□□□ -0.44
CSNK1E-211ENST00000451964 GP1BAP07359 652 aa12.33□□□□□ -0.44
CSNK1E-211ENST00000451964 CTSEP14091 401 aa12.33□□□□□ -0.44
CSNK1E-211ENST00000451964 NFKBIAP25963 317 aa12.33□□□□□ -0.44
CSNK1E-211ENST00000451964 DUSP3P51452 185 aaPredicted RBP12.33□□□□□ -0.44
CSNK1E-211ENST00000451964 ARHGEF7Q14155 803 aa12.33□□□□□ -0.44
CSNK1E-211ENST00000451964 ELOCQ15369 112 aa12.33□□□□□ -0.44
CSNK1E-211ENST00000451964 QPCTQ16769 361 aa12.33□□□□□ -0.44
CSNK1E-211ENST00000451964 ODF2Q5BJF6 829 aa12.33□□□□□ -0.44
CSNK1E-211ENST00000451964 PERM1Q5SV97 790 aa12.33□□□□□ -0.44
CSNK1E-211ENST00000451964 KAZNQ674X7 775 aa12.33□□□□□ -0.44
CSNK1E-211ENST00000451964 C11orf63Q6NUN7 778 aa12.33□□□□□ -0.44
CSNK1E-211ENST00000451964 EFL1Q7Z2Z2 1120 aaKnown RBP12.33□□□□□ -0.44
CSNK1E-211ENST00000451964 HEATR4Q86WZ0 1026 aa12.33□□□□□ -0.44
CSNK1E-211ENST00000451964 TMEM139Q8IV31 216 aa12.33□□□□□ -0.44
CSNK1E-211ENST00000451964 SFTPA2Q8IWL1 248 aa12.33□□□□□ -0.44
CSNK1E-211ENST00000451964 ACRBPQ8NEB7 543 aa12.33□□□□□ -0.44
CSNK1E-211ENST00000451964 LPCAT1Q8NF37 534 aa12.33□□□□□ -0.44
CSNK1E-211ENST00000451964 ATL2Q8NHH9 583 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms