RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 TGM2P21980 687 aa13.84□□□□□ -0.19
PDLIM2-213ENST00000448520 RBMS1P29558 406 aaKnown RBP13.84□□□□□ -0.19
PDLIM2-213ENST00000448520 HCAR3P49019 387 aa13.84□□□□□ -0.19
PDLIM2-213ENST00000448520 BLKP51451 505 aa13.84□□□□□ -0.19
PDLIM2-213ENST00000448520 YBEYP58557 167 aaPredicted RBP13.84□□□□□ -0.19
PDLIM2-213ENST00000448520 RHDQ02161 417 aa13.84□□□□□ -0.19
PDLIM2-213ENST00000448520 GBE1Q04446 702 aa13.84□□□□□ -0.19
PDLIM2-213ENST00000448520 DEFB133Q30KQ1 61 aa13.84□□□□□ -0.19
PDLIM2-213ENST00000448520 TFDP3Q5H9I0 405 aa13.84□□□□□ -0.19
PDLIM2-213ENST00000448520 FAM182AQ5T1J6 154 aa13.84□□□□□ -0.19
PDLIM2-213ENST00000448520 SEL1L2Q5TEA6 688 aa13.84□□□□□ -0.19
PDLIM2-213ENST00000448520 FAXCQ5TGI0 409 aa13.84□□□□□ -0.19
PDLIM2-213ENST00000448520 RBM44Q6ZP01 1051 aaKnown RBP13.84□□□□□ -0.19
PDLIM2-213ENST00000448520 B4GALNT4Q76KP1 1039 aa13.84□□□□□ -0.19
PDLIM2-213ENST00000448520 EFL1Q7Z2Z2 1120 aaKnown RBP13.84□□□□□ -0.19
PDLIM2-213ENST00000448520 MAP7D3Q8IWC1 876 aa13.84□□□□□ -0.19
PDLIM2-213ENST00000448520 SDR16C5Q8N3Y7 309 aa13.84□□□□□ -0.19
PDLIM2-213ENST00000448520 PLD5Q8N7P1 536 aa13.84□□□□□ -0.19
PDLIM2-213ENST00000448520 RTL3Q8N8U3 475 aaKnown RBP13.84□□□□□ -0.19
PDLIM2-213ENST00000448520 HCAR2Q8TDS4 363 aa13.84□□□□□ -0.19
PDLIM2-213ENST00000448520 CXorf40AQ8TE69 158 aa13.84□□□□□ -0.19
PDLIM2-213ENST00000448520 KCNE4Q8WWG9 221 aa13.84□□□□□ -0.19
PDLIM2-213ENST00000448520 GDAP1L1Q96MZ0 367 aa13.84□□□□□ -0.19
PDLIM2-213ENST00000448520 SLC46A1Q96NT5 459 aa13.84□□□□□ -0.19
PDLIM2-213ENST00000448520 BOCQ9BWV1 1114 aa13.84□□□□□ -0.19
PDLIM2-213ENST00000448520 CPEB1Q9BZB8 566 aaKnown RBP13.84□□□□□ -0.19
PDLIM2-213ENST00000448520 KLC2Q9H0B6 622 aa13.84□□□□□ -0.19
PDLIM2-213ENST00000448520 CARD9Q9H257 536 aa13.84□□□□□ -0.19
PDLIM2-213ENST00000448520 NOL6Q9H6R4 1146 aaKnown RBP13.84□□□□□ -0.19
PDLIM2-213ENST00000448520 CAAP1Q9H8G2 361 aa13.84□□□□□ -0.19
PDLIM2-213ENST00000448520 RCOR3Q9P2K3 495 aaPredicted RBP13.84□□□□□ -0.19
PDLIM2-213ENST00000448520 SAE1Q9UBE0 346 aaPredicted RBP13.84□□□□□ -0.19
PDLIM2-213ENST00000448520 APOBEC3BQ9UH17 382 aaKnown RBP13.84□□□□□ -0.19
PDLIM2-213ENST00000448520 PCDHGA8Q9Y5G5 932 aa13.84□□□□□ -0.19
PDLIM2-213ENST00000448520 ERVH48-1M5A8F1 160 aa13.83□□□□□ -0.2
PDLIM2-213ENST00000448520 PDE2AO00408 941 aaPredicted RBP13.83□□□□□ -0.2
PDLIM2-213ENST00000448520 APOL1O14791 398 aa13.83□□□□□ -0.2
PDLIM2-213ENST00000448520 MMP20O60882 483 aa13.83□□□□□ -0.2
PDLIM2-213ENST00000448520 IGSF6O95976 241 aa13.83□□□□□ -0.2
PDLIM2-213ENST00000448520 PRB1P04280 392 aa13.83□□□□□ -0.2
PDLIM2-213ENST00000448520 ANXA6P08133 673 aa13.83□□□□□ -0.2
PDLIM2-213ENST00000448520 TIMP2P16035 220 aa13.83□□□□□ -0.2
PDLIM2-213ENST00000448520 MLLT3P42568 568 aaPredicted RBP13.83□□□□□ -0.2
PDLIM2-213ENST00000448520 PPARDQ03181 441 aa13.83□□□□□ -0.2
PDLIM2-213ENST00000448520 SLC10A2Q12908 348 aaPredicted RBP13.83□□□□□ -0.2
PDLIM2-213ENST00000448520 GRM3Q14832 879 aa13.83□□□□□ -0.2
PDLIM2-213ENST00000448520 PPP2R5EQ16537 467 aa13.83□□□□□ -0.2
PDLIM2-213ENST00000448520 PRRT3Q5FWE3 981 aa13.83□□□□□ -0.2
PDLIM2-213ENST00000448520 C6orf132Q5T0Z8 1188 aa13.83□□□□□ -0.2
PDLIM2-213ENST00000448520 SLC9A4Q6AI14 798 aa13.83□□□□□ -0.2
PDLIM2-213ENST00000448520 ESRP1Q6NXG1 681 aaKnown RBP13.83□□□□□ -0.2
PDLIM2-213ENST00000448520 GUSBP11Q6P575 273 aa13.83□□□□□ -0.2
PDLIM2-213ENST00000448520 LVRNQ6Q4G3 990 aa13.83□□□□□ -0.2
PDLIM2-213ENST00000448520 ZNF605Q86T29 641 aa13.83□□□□□ -0.2
PDLIM2-213ENST00000448520 ZNF354CQ86Y25 554 aa13.83□□□□□ -0.2
PDLIM2-213ENST00000448520 SLC13A5Q86YT5 568 aaPredicted RBP13.83□□□□□ -0.2
PDLIM2-213ENST00000448520 PHACTR4Q8IZ21 702 aa13.83□□□□□ -0.2
PDLIM2-213ENST00000448520 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.83□□□□□ -0.2
PDLIM2-213ENST00000448520 SCG3Q8WXD2 468 aaKnown RBP13.83□□□□□ -0.2
PDLIM2-213ENST00000448520 NAF1Q96HR8 494 aaKnown RBP13.83□□□□□ -0.2
PDLIM2-213ENST00000448520 CATSPERBQ9H7T0 1116 aa13.83□□□□□ -0.2
PDLIM2-213ENST00000448520 ASCL3Q9NQ33 180 aa13.83□□□□□ -0.2
PDLIM2-213ENST00000448520 R3HDM2Q9Y2K5 976 aaKnown RBP13.83□□□□□ -0.2
PDLIM2-213ENST00000448520 MGAQ8IWI9 3026 aa13.83□□□□□ -0.2
PDLIM2-213ENST00000448520 WASH4PA8MWX3 477 aa13.82□□□□□ -0.2
PDLIM2-213ENST00000448520 ZNF487B1APH4 448 aa13.82□□□□□ -0.2
PDLIM2-213ENST00000448520 YY2O15391 372 aa13.82□□□□□ -0.2
PDLIM2-213ENST00000448520 FGF10O15520 208 aaPredicted RBP13.82□□□□□ -0.2
PDLIM2-213ENST00000448520 KLK10O43240 276 aa13.82□□□□□ -0.2
PDLIM2-213ENST00000448520 GCATO75600 419 aa13.82□□□□□ -0.2
PDLIM2-213ENST00000448520 C1QL1O75973 258 aa13.82□□□□□ -0.2
PDLIM2-213ENST00000448520 URI1O94763 535 aaPredicted RBP13.82□□□□□ -0.2
PDLIM2-213ENST00000448520 TMCC1O94876 653 aa13.82□□□□□ -0.2
PDLIM2-213ENST00000448520 FGGP02679 453 aa13.82□□□□□ -0.2
PDLIM2-213ENST00000448520 TCP1P17987 556 aaKnown RBP13.82□□□□□ -0.2
PDLIM2-213ENST00000448520 XPAP23025 273 aaPredicted RBP13.82□□□□□ -0.2
PDLIM2-213ENST00000448520 PTPN7P35236 360 aa13.82□□□□□ -0.2
PDLIM2-213ENST00000448520 COPS2P61201 443 aa13.82□□□□□ -0.2
PDLIM2-213ENST00000448520 RHOAP61586 193 aa13.82□□□□□ -0.2
PDLIM2-213ENST00000448520 ELP6Q0PNE2 266 aa13.82□□□□□ -0.2
PDLIM2-213ENST00000448520 KCTD19Q17RG1 926 aaPredicted RBP13.82□□□□□ -0.2
PDLIM2-213ENST00000448520 PARP15Q460N3 678 aa13.82□□□□□ -0.2
PDLIM2-213ENST00000448520 TMEM52BQ4KMG9 183 aa13.82□□□□□ -0.2
PDLIM2-213ENST00000448520 TAF1BQ53T94 588 aaPredicted RBP13.82□□□□□ -0.2
PDLIM2-213ENST00000448520 TPRG1LQ5T0D9 272 aa13.82□□□□□ -0.2
PDLIM2-213ENST00000448520 ATXN7L2Q5T6C5 722 aaPredicted RBP13.82□□□□□ -0.2
PDLIM2-213ENST00000448520 TMCO3Q6UWJ1 677 aa13.82□□□□□ -0.2
PDLIM2-213ENST00000448520 MACC1Q6ZN28 852 aa13.82□□□□□ -0.2
PDLIM2-213ENST00000448520 BBS12Q6ZW61 710 aa13.82□□□□□ -0.2
PDLIM2-213ENST00000448520 ARHGAP12Q8IWW6 846 aa13.82□□□□□ -0.2
PDLIM2-213ENST00000448520 RASGEF1CQ8N431 466 aa13.82□□□□□ -0.2
PDLIM2-213ENST00000448520 FSTL5Q8N475 847 aaPredicted RBP13.82□□□□□ -0.2
PDLIM2-213ENST00000448520 ARL14Q8N4G2 192 aa13.82□□□□□ -0.2
PDLIM2-213ENST00000448520 SNRNP27Q8WVK2 155 aaKnown RBP13.82□□□□□ -0.2
PDLIM2-213ENST00000448520 VOPP1Q96AW1 172 aa13.82□□□□□ -0.2
PDLIM2-213ENST00000448520 PBKQ96KB5 322 aa13.82□□□□□ -0.2
PDLIM2-213ENST00000448520 MAK16Q9BXY0 300 aaKnown RBP13.82□□□□□ -0.2
PDLIM2-213ENST00000448520 SLC39A8Q9C0K1 460 aa13.82□□□□□ -0.2
PDLIM2-213ENST00000448520 GGT7Q9UJ14 662 aa13.82□□□□□ -0.2
PDLIM2-213ENST00000448520 PADI4Q9UM07 663 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms