RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 BZW1Q7L1Q6 419 aaKnown RBP12.75□□□□□ -0.37
PRPF40A-203ENST00000448428 RD3Q7Z3Z2 195 aa12.75□□□□□ -0.37
PRPF40A-203ENST00000448428 TECPR1Q7Z6L1 1165 aa12.75□□□□□ -0.37
PRPF40A-203ENST00000448428 KIAA1328Q86T90 577 aa12.75□□□□□ -0.37
PRPF40A-203ENST00000448428 HID1Q8IV36 788 aa12.75□□□□□ -0.37
PRPF40A-203ENST00000448428 CCDC50Q8IVM0 306 aa12.75□□□□□ -0.37
PRPF40A-203ENST00000448428 NDUFAF2Q8N183 169 aa12.75□□□□□ -0.37
PRPF40A-203ENST00000448428 FAM181AQ8N9Y4 354 aa12.75□□□□□ -0.37
PRPF40A-203ENST00000448428 KIAA1524Q8TCG1 905 aa12.75□□□□□ -0.37
PRPF40A-203ENST00000448428 P3H4Q92791 437 aa12.75□□□□□ -0.37
PRPF40A-203ENST00000448428 NUS1Q96E22 293 aa12.75□□□□□ -0.37
PRPF40A-203ENST00000448428 DTD2Q96FN9 168 aa12.75□□□□□ -0.37
PRPF40A-203ENST00000448428 RBM41Q96IZ5 413 aaKnown RBP12.75□□□□□ -0.37
PRPF40A-203ENST00000448428 WDR92Q96MX6 357 aa12.75□□□□□ -0.37
PRPF40A-203ENST00000448428 AGAP3Q96P47 875 aa12.75□□□□□ -0.37
PRPF40A-203ENST00000448428 DESI2Q9BSY9 194 aa12.75□□□□□ -0.37
PRPF40A-203ENST00000448428 LRRC61Q9BV99 259 aa12.75□□□□□ -0.37
PRPF40A-203ENST00000448428 DUSP23Q9BVJ7 150 aa12.75□□□□□ -0.37
PRPF40A-203ENST00000448428 LGR4Q9BXB1 951 aa12.75□□□□□ -0.37
PRPF40A-203ENST00000448428 HEMGNQ9BXL5 484 aa12.75□□□□□ -0.37
PRPF40A-203ENST00000448428 CLPBQ9H078 707 aa12.75□□□□□ -0.37
PRPF40A-203ENST00000448428 PCDH9Q9HC56 1237 aa12.75□□□□□ -0.37
PRPF40A-203ENST00000448428 APOBEC3BQ9UH17 382 aaKnown RBP12.75□□□□□ -0.37
PRPF40A-203ENST00000448428 LY6G6EA0A0G2JKS1 128 aa12.74□□□□□ -0.37
PRPF40A-203ENST00000448428 GRID2IPA4D2P6 1211 aa12.74□□□□□ -0.37
PRPF40A-203ENST00000448428 FAM149AA5PLN7 773 aa12.74□□□□□ -0.37
PRPF40A-203ENST00000448428 TMEM202A6NGA9 273 aa12.74□□□□□ -0.37
PRPF40A-203ENST00000448428 PSMD11O00231 422 aa12.74□□□□□ -0.37
PRPF40A-203ENST00000448428 TPP1O14773 563 aa12.74□□□□□ -0.37
PRPF40A-203ENST00000448428 YY2O15391 372 aa12.74□□□□□ -0.37
PRPF40A-203ENST00000448428 PROS1P07225 676 aa12.74□□□□□ -0.37
PRPF40A-203ENST00000448428 HOXC4P09017 264 aaPredicted RBP12.74□□□□□ -0.37
PRPF40A-203ENST00000448428 CDK4P11802 303 aa12.74□□□□□ -0.37
PRPF40A-203ENST00000448428 CKMT1AP12532 417 aa12.74□□□□□ -0.37
PRPF40A-203ENST00000448428 TSHRP16473 764 aa12.74□□□□□ -0.37
PRPF40A-203ENST00000448428 CA4P22748 312 aa12.74□□□□□ -0.37
PRPF40A-203ENST00000448428 BLKP51451 505 aa12.74□□□□□ -0.37
PRPF40A-203ENST00000448428 EPHB1P54762 984 aa12.74□□□□□ -0.37
PRPF40A-203ENST00000448428 CLDN6P56747 220 aa12.74□□□□□ -0.37
PRPF40A-203ENST00000448428 KIAA1024LP59773 190 aa12.74□□□□□ -0.37
PRPF40A-203ENST00000448428 RPL26P61254 145 aaKnown RBP12.74□□□□□ -0.37
PRPF40A-203ENST00000448428 DAB2P98082 770 aa12.74□□□□□ -0.37
PRPF40A-203ENST00000448428 ILKQ13418 452 aa12.74□□□□□ -0.37
PRPF40A-203ENST00000448428 DEFB133Q30KQ1 61 aa12.74□□□□□ -0.37
PRPF40A-203ENST00000448428 TEX44Q53QW1 395 aa12.74□□□□□ -0.37
PRPF40A-203ENST00000448428 LRRC66Q68CR7 880 aa12.74□□□□□ -0.37
PRPF40A-203ENST00000448428 NT5DC3Q86UY8 548 aa12.74□□□□□ -0.37
PRPF40A-203ENST00000448428 GALNT15Q8N3T1 639 aa12.74□□□□□ -0.37
PRPF40A-203ENST00000448428 LRRC57Q8N9N7 239 aa12.74□□□□□ -0.37
PRPF40A-203ENST00000448428 LPCAT1Q8NF37 534 aa12.74□□□□□ -0.37
PRPF40A-203ENST00000448428 TFB1MQ8WVM0 346 aaKnown RBP12.74□□□□□ -0.37
PRPF40A-203ENST00000448428 IMP4Q96G21 291 aaKnown RBP12.74□□□□□ -0.37
PRPF40A-203ENST00000448428 TBATAQ96M53 351 aa12.74□□□□□ -0.37
PRPF40A-203ENST00000448428 RBM15Q96T37 977 aaKnown RBP eCLIP12.74□□□□□ -0.373e-8■□□□□ 8.9
PRPF40A-203ENST00000448428 SLC25A51Q9H1U9 297 aa12.74□□□□□ -0.37
PRPF40A-203ENST00000448428 KCTD5Q9NXV2 234 aa12.74□□□□□ -0.37
PRPF40A-203ENST00000448428 TRIM10Q9UDY6 481 aa12.74□□□□□ -0.37
PRPF40A-203ENST00000448428 RPL26L1Q9UNX3 145 aaKnown RBP12.74□□□□□ -0.37
PRPF40A-203ENST00000448428 U3KQA8 63 aa12.74□□□□□ -0.37
PRPF40A-203ENST00000448428 SPEGQ15772 3267 aa12.74□□□□□ -0.37
PRPF40A-203ENST00000448428 GOLGA4Q13439 2230 aaKnown RBP12.73□□□□□ -0.37
PRPF40A-203ENST00000448428 CAPN8A6NHC0 703 aa12.73□□□□□ -0.37
PRPF40A-203ENST00000448428 ANKRD66B4E2M5 251 aa12.73□□□□□ -0.37
PRPF40A-203ENST00000448428 LMO7DNF2Z398 122 aa12.73□□□□□ -0.37
PRPF40A-203ENST00000448428 CACNB4O00305 520 aaPredicted RBP12.73□□□□□ -0.37
PRPF40A-203ENST00000448428 RASGRP1O95267 797 aa12.73□□□□□ -0.37
PRPF40A-203ENST00000448428 CLDN7O95471 211 aa12.73□□□□□ -0.37
PRPF40A-203ENST00000448428 TNFP01375 233 aa12.73□□□□□ -0.37
PRPF40A-203ENST00000448428 CELA2BP08218 269 aaPredicted RBP12.73□□□□□ -0.37
PRPF40A-203ENST00000448428 CTSEP14091 401 aa12.73□□□□□ -0.37
PRPF40A-203ENST00000448428 PTPN3P26045 913 aa12.73□□□□□ -0.37
PRPF40A-203ENST00000448428 CTNNA2P26232 953 aa12.73□□□□□ -0.37
PRPF40A-203ENST00000448428 COPS2P61201 443 aa12.73□□□□□ -0.37
PRPF40A-203ENST00000448428 WASHC5Q12768 1159 aa12.73□□□□□ -0.37
PRPF40A-203ENST00000448428 PPP2R5EQ16537 467 aa12.73□□□□□ -0.37
PRPF40A-203ENST00000448428 CDKN3Q16667 212 aa12.73□□□□□ -0.37
PRPF40A-203ENST00000448428 QPCTQ16769 361 aa12.73□□□□□ -0.37
PRPF40A-203ENST00000448428 ZCCHC8Q6NZY4 707 aaKnown RBP12.73□□□□□ -0.37
PRPF40A-203ENST00000448428 BBS12Q6ZW61 710 aa12.73□□□□□ -0.37
PRPF40A-203ENST00000448428 KDELC2Q7Z4H8 507 aa12.73□□□□□ -0.37
PRPF40A-203ENST00000448428 ZC3H18Q86VM9 953 aaKnown RBP12.73□□□□□ -0.37
PRPF40A-203ENST00000448428 TMPRSS12Q86WS5 348 aa12.73□□□□□ -0.37
PRPF40A-203ENST00000448428 OR56A4Q8NGH8 313 aa12.73□□□□□ -0.37
PRPF40A-203ENST00000448428 ATL2Q8NHH9 583 aa12.73□□□□□ -0.37
PRPF40A-203ENST00000448428 OR1E3Q8WZA6 343 aa12.73□□□□□ -0.37
PRPF40A-203ENST00000448428 TADA1Q96BN2 335 aa12.73□□□□□ -0.37
PRPF40A-203ENST00000448428 HAUS1Q96CS2 278 aa12.73□□□□□ -0.37
PRPF40A-203ENST00000448428 TEKT5Q96M29 485 aa12.73□□□□□ -0.37
PRPF40A-203ENST00000448428 TRIB3Q96RU7 358 aa12.73□□□□□ -0.37
PRPF40A-203ENST00000448428 HERPUD2Q9BSE4 406 aa12.73□□□□□ -0.37
PRPF40A-203ENST00000448428 TEX101Q9BY14 249 aa12.73□□□□□ -0.37
PRPF40A-203ENST00000448428 ABCG8Q9H221 673 aa12.73□□□□□ -0.37
PRPF40A-203ENST00000448428 GLOD4Q9HC38 313 aa12.73□□□□□ -0.37
PRPF40A-203ENST00000448428 MRPL40Q9NQ50 206 aaKnown RBP12.73□□□□□ -0.37
PRPF40A-203ENST00000448428 KLQ9UEF7 1012 aa12.73□□□□□ -0.37
PRPF40A-203ENST00000448428 CD84Q9UIB8 345 aa12.73□□□□□ -0.37
PRPF40A-203ENST00000448428 MACROD2A1Z1Q3 448 aa12.72□□□□□ -0.37
PRPF40A-203ENST00000448428 CCDC66A2RUB6 948 aa12.72□□□□□ -0.37
PRPF40A-203ENST00000448428 TNFRSF10CO14798 259 aa12.72□□□□□ -0.37
PRPF40A-203ENST00000448428 FUCA1P04066 466 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms