RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 TARM1B6A8C7 271 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 GOLGA8NF8WBI6 632 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 NEMP1O14524 444 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 SERPINA6P08185 405 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 HSPA8P11142 646 aaKnown RBP9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 SYN1P17600 705 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 EN2P19622 333 aaPredicted RBP9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 LPOP22079 712 aaPredicted RBP9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 DNAJB1P25685 340 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 GKP32189 559 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 CCR2P41597 374 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 ZNF140P52738 457 aaPredicted RBP9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 SLC7A9P82251 487 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 NSUN2Q08J23 767 aaKnown RBP eCLIP9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 MPPE1Q53F39 396 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 INO80DQ53TQ3 878 aaPredicted RBP9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 FAM45BPQ6NSW5 357 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 RETSATQ6NUM9 610 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 ZNF549Q6P9A3 640 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 TMEM207Q6UWW9 146 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 CAMK1DQ8IU85 385 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 GPR65Q8IYL9 337 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 MRPL43Q8N983 215 aaKnown RBP9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 TXNDC5Q8NBS9 432 aaKnown RBP9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 FAM45AQ8TCE6 357 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 POF1BQ8WVV4 589 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 PEX13Q92968 403 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 EXT2Q93063 718 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 TCEAL4Q96EI5 215 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 ALG14Q96F25 216 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 RPL10LQ96L21 214 aaKnown RBP9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 RAD9AQ99638 391 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 BTBD10Q9BSF8 475 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 C2orf49Q9BVC5 232 aaPredicted RBP9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 TNKS2Q9H2K2 1166 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 ALG9Q9H6U8 611 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 TLE6Q9H808 572 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 DNAJC28Q9NX36 388 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 FAM50BQ9Y247 325 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 SLC4A7Q9Y6M7 1214 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 CAPN14A8MX76 684 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 B2RBV5 119 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 ZNF195O14628 629 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 STX7O15400 261 aaKnown RBP9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 HNRNPCL1O60812 293 aaKnown RBP9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 NDUFS3O75489 264 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 TFEBP19484 476 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 CD70P32970 193 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 BMPR1AP36894 532 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 RPL14P50914 215 aaKnown RBP9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 STC1P52823 247 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 MXRA7P84157 204 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 LMAN2Q12907 356 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 PDAP1Q13442 181 aaKnown RBP9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 SLC14A2Q15849 920 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 SLC9B1Q4ZJI4 515 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 ZRANB3Q5FWF4 1079 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 TMEM240Q5SV17 173 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 ZNF697Q5TEC3 545 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 TRIM67Q6ZTA4 783 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 CMTM8Q8IZV2 173 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 DCAF4L2Q8NA75 395 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 GPR150Q8NGU9 434 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 CCDC106Q9BWC9 280 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 POLR3BQ9NW08 1133 aaPredicted RBP9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 EVLQ9UI08 416 aaPredicted RBP9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 ZDHHC2Q9UIJ5 367 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 FKBPLQ9UIM3 349 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 ZNF510Q9Y2H8 683 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 FIS1Q9Y3D6 152 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 LTBP2Q14767 1821 aa9.52□□□□□ -0.89
COL6A4P1-201ENST00000446690 A8MX80 341 aa9.52□□□□□ -0.89
COL6A4P1-201ENST00000446690 E9PBE3 544 aa9.52□□□□□ -0.89
COL6A4P1-201ENST00000446690 KLHL41O60662 606 aa9.52□□□□□ -0.89
COL6A4P1-201ENST00000446690 SRP72O76094 671 aaKnown RBP9.52□□□□□ -0.89
COL6A4P1-201ENST00000446690 RHOBTB1O94844 696 aa9.52□□□□□ -0.89
COL6A4P1-201ENST00000446690 CYBBP04839 570 aa9.52□□□□□ -0.89
COL6A4P1-201ENST00000446690 RBP1P09455 135 aa9.52□□□□□ -0.89
COL6A4P1-201ENST00000446690 ALPIP09923 528 aa9.52□□□□□ -0.89
COL6A4P1-201ENST00000446690 BMP1P13497 986 aa9.52□□□□□ -0.89
COL6A4P1-201ENST00000446690 HNRNPLP14866 589 aaKnown RBP eCLIP9.52□□□□□ -0.89
COL6A4P1-201ENST00000446690 ATP5F1P24539 256 aaPredicted RBP9.52□□□□□ -0.89
COL6A4P1-201ENST00000446690 MC4RP32245 332 aa9.52□□□□□ -0.89
COL6A4P1-201ENST00000446690 PRKAA2P54646 552 aa9.52□□□□□ -0.89
COL6A4P1-201ENST00000446690 ASPHQ12797 758 aa9.52□□□□□ -0.89
COL6A4P1-201ENST00000446690 TUBB3Q13509 450 aa9.52□□□□□ -0.89
COL6A4P1-201ENST00000446690 ACAP2Q15057 778 aa9.52□□□□□ -0.89
COL6A4P1-201ENST00000446690 TEAD2Q15562 447 aa9.52□□□□□ -0.89
COL6A4P1-201ENST00000446690 TECRLQ5HYJ1 363 aa9.52□□□□□ -0.89
COL6A4P1-201ENST00000446690 AFTPHQ6ULP2 937 aa9.52□□□□□ -0.89
COL6A4P1-201ENST00000446690 RPS27LQ71UM5 84 aaKnown RBP9.52□□□□□ -0.89
COL6A4P1-201ENST00000446690 TAS2R42Q7RTR8 314 aa9.52□□□□□ -0.89
COL6A4P1-201ENST00000446690 SPRED2Q7Z698 418 aa9.52□□□□□ -0.89
COL6A4P1-201ENST00000446690 GALNT7Q86SF2 657 aa9.52□□□□□ -0.89
COL6A4P1-201ENST00000446690 MAPK15Q8TD08 544 aa9.52□□□□□ -0.89
COL6A4P1-201ENST00000446690 MCUR1Q96AQ8 359 aa9.52□□□□□ -0.89
COL6A4P1-201ENST00000446690 UBXN10Q96LJ8 280 aa9.52□□□□□ -0.89
COL6A4P1-201ENST00000446690 MIPEPQ99797 713 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms