RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 ATP6V1E1P36543 226 aa4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 SLC15A1P46059 708 aa4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 CENPAP49450 140 aa4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 ARSFP54793 590 aa4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 NIPAL4Q0D2K0 466 aa4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 WASHC5Q12768 1159 aa4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 FRG1Q14331 258 aaKnown RBP4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 DUSP6Q16828 381 aa4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 C9orf152Q5JTZ5 239 aa4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 Q5PR19 223 aa4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 PLPPR4Q7Z2D5 763 aa4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 CCDC186Q7Z3E2 898 aa4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 IRF2BP2Q7Z5L9 587 aa4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 CCDC170Q8IYT3 715 aa4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 ADGRF5Q8IZF2 1346 aa4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 NUP93Q8N1F7 819 aa4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 SYT2Q8N9I0 419 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 C11orf65Q8NCR3 313 aa4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 ENGASEQ8NFI3 743 aa4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 OR6J1Q8NGC5 347 aa4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 GSDMBQ8TAX9 411 aa4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 SMG7Q92540 1137 aaKnown RBP4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 SAT2Q96F10 170 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 ZNF521Q96K83 1311 aa4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 C1orf74Q96LT6 269 aa4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 FNBP1Q96RU3 617 aa4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 ANKRD2Q9GZV1 360 aa4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 FOXP1Q9H334 677 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 RRP7BPQ9NSQ0 103 aa4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 C20orf141Q9NUB4 165 aa4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 BICRAQ9NZM4 1560 aa4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 MTMR6Q9Y217 621 aa4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 TRPV2Q9Y5S1 764 aa4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 EVPLQ92817 2033 aa4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 GPRASP1Q5JY77 1395 aa4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 hCG_1809904A0A1W2PP81 198 aa4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 A0A1W2PPE2 198 aa4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 A0A1W2PR64 198 aa4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 CDRT15L2A8MXV6 281 aa4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 HSPB6O14558 160 aa4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 SEC31AO94979 1220 aaKnown RBP4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 CLDN7O95471 211 aa4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 TUBBP07437 444 aa4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 MYZAPP0CAP1 466 aa4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 PSG1P11464 419 aa4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 HOXB2P14652 356 aa4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 FMO4P31512 558 aa4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 BLKP51451 505 aa4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 SELENOVP59797 346 aa4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 CSTF3Q12996 717 aaKnown RBP4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 MMEL1Q495T6 779 aa4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 ODF2Q5BJF6 829 aa4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 ZNF628Q5EBL2 1059 aa4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 MANEAQ5SRI9 462 aa4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 KRT80Q6KB66 452 aa4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 C11orf88Q6PI97 169 aa4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 PRSS45Q7RTY3 260 aa4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 TRAPPC11Q7Z392 1133 aa4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 TMC8Q8IU68 726 aa4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 FAM217AQ8IXS0 508 aa4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 GHDCQ8N2G8 530 aa4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 CPXM2Q8N436 756 aa4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 NAT8LQ8N9F0 302 aa4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 IL17RCQ8NAC3 791 aa4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 OR8H1Q8NGG4 311 aa4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 GDAP1Q8TB36 358 aa4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 SLC25A28Q96A46 364 aa4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 RMDN1Q96DB5 314 aa4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 GBP5Q96PP8 586 aa4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 FIZ1Q96SL8 496 aa4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 OPA3Q9H6K4 179 aa4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 TRPV4Q9HBA0 871 aa4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 WDR6Q9NNW5 1121 aaKnown RBP4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 ENTPD7Q9NQZ7 604 aa4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 SIRT3Q9NTG7 399 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 NCKIPSDQ9NZQ3 722 aa4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 SELENONQ9NZV5 590 aa4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 PTRH2Q9Y3E5 179 aaKnown RBP4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 RAP2CQ9Y3L5 183 aa4.58□□□□□ -1.68
HMGB1P48-201ENST00000446155 NACADO15069 1562 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 TTC36A6NLP5 189 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 LRRC53A6NM62 1247 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 SNAP23O00161 211 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 EBAG9O00559 213 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 PSMA7O14818 248 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 HTATSF1O43719 755 aaKnown RBP4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 GOSR1O95249 250 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 CHRNB2P17787 502 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 CTPS1P17812 591 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 PSMA3P25788 255 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 TLX1P31314 330 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 GP5P40197 560 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 HNF4AP41235 474 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 PIK3CAP42336 1068 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 LIG4P49917 911 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 EFNA5P52803 228 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 MFAP4P55083 255 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 HDAC4P56524 1084 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 TMF1P82094 1093 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 UBXN1Q04323 297 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms