RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 LY6G6EA0A0G2JKS1 128 aa21.07■□□□□ 0.96
CDKN3-204ENST00000442975 LMO7DNF2Z398 122 aa21.07■□□□□ 0.96
CDKN3-204ENST00000442975 FZD6O60353 706 aa21.07■□□□□ 0.96
CDKN3-204ENST00000442975 KELP23276 732 aa21.07■□□□□ 0.96
CDKN3-204ENST00000442975 CDKN2BP42772 138 aa21.07■□□□□ 0.96
CDKN3-204ENST00000442975 DUSP3P51452 185 aaPredicted RBP21.07■□□□□ 0.96
CDKN3-204ENST00000442975 TFDP2Q14188 446 aa21.07■□□□□ 0.96
CDKN3-204ENST00000442975 IHHQ14623 411 aa21.07■□□□□ 0.96
CDKN3-204ENST00000442975 KCTD16Q68DU8 428 aa21.07■□□□□ 0.96
CDKN3-204ENST00000442975 RAET1GQ6H3X3 334 aa21.07■□□□□ 0.96
CDKN3-204ENST00000442975 PNCKQ6P2M8 343 aa21.07■□□□□ 0.96
CDKN3-204ENST00000442975 SPOCD1Q6ZMY3 1216 aa21.07■□□□□ 0.96
CDKN3-204ENST00000442975 FSTL5Q8N475 847 aaPredicted RBP21.07■□□□□ 0.96
CDKN3-204ENST00000442975 OR56A4Q8NGH8 313 aa21.07■□□□□ 0.96
CDKN3-204ENST00000442975 MDM1Q8TC05 714 aa21.07■□□□□ 0.96
CDKN3-204ENST00000442975 IFI44Q8TCB0 444 aa21.07■□□□□ 0.96
CDKN3-204ENST00000442975 TBATAQ96M53 351 aa21.07■□□□□ 0.96
CDKN3-204ENST00000442975 AGAP3Q96P47 875 aa21.07■□□□□ 0.96
CDKN3-204ENST00000442975 CCDC86Q9H6F5 360 aaKnown RBP21.07■□□□□ 0.96
CDKN3-204ENST00000442975 SUDS3Q9H7L9 328 aaPredicted RBP21.07■□□□□ 0.96
CDKN3-204ENST00000442975 PCDH9Q9HC56 1237 aa21.07■□□□□ 0.96
CDKN3-204ENST00000442975 FGF22Q9HCT0 170 aa21.07■□□□□ 0.96
CDKN3-204ENST00000442975 NCKIPSDQ9NZQ3 722 aa21.07■□□□□ 0.96
CDKN3-204ENST00000442975 MOSPD1Q9UJG1 213 aa21.07■□□□□ 0.96
CDKN3-204ENST00000442975 U3KQA8 63 aa21.07■□□□□ 0.96
CDKN3-204ENST00000442975 A0A0J9YYE9 177 aa21.06■□□□□ 0.96
CDKN3-204ENST00000442975 CPED1A4D0V7 1026 aa21.06■□□□□ 0.96
CDKN3-204ENST00000442975 TMEM202A6NGA9 273 aa21.06■□□□□ 0.96
CDKN3-204ENST00000442975 CAPN8A6NHC0 703 aa21.06■□□□□ 0.96
CDKN3-204ENST00000442975 PSMD11O00231 422 aa21.06■□□□□ 0.96
CDKN3-204ENST00000442975 CST8O60676 142 aa21.06■□□□□ 0.96
CDKN3-204ENST00000442975 TRBC1P01850 177 aa21.06■□□□□ 0.96
CDKN3-204ENST00000442975 FECHP22830 423 aa21.06■□□□□ 0.96
CDKN3-204ENST00000442975 INSM1Q01101 510 aaPredicted RBP21.06■□□□□ 0.96
CDKN3-204ENST00000442975 ELOCQ15369 112 aa21.06■□□□□ 0.96
CDKN3-204ENST00000442975 NR0B2Q15466 257 aa21.06■□□□□ 0.96
CDKN3-204ENST00000442975 GUSBP11Q6P575 273 aa21.06■□□□□ 0.96
CDKN3-204ENST00000442975 RAD9BQ6WBX8 426 aa21.06■□□□□ 0.96
CDKN3-204ENST00000442975 Q6ZVL8 140 aa21.06■□□□□ 0.96
CDKN3-204ENST00000442975 HEATR4Q86WZ0 1026 aa21.06■□□□□ 0.96
CDKN3-204ENST00000442975 SPC24Q8NBT2 197 aa21.06■□□□□ 0.96
CDKN3-204ENST00000442975 ACRBPQ8NEB7 543 aa21.06■□□□□ 0.96
CDKN3-204ENST00000442975 OR1E3Q8WZA6 343 aa21.06■□□□□ 0.96
CDKN3-204ENST00000442975 GLMNQ92990 594 aa21.06■□□□□ 0.96
CDKN3-204ENST00000442975 HAUS1Q96CS2 278 aa21.06■□□□□ 0.96
CDKN3-204ENST00000442975 CLPBQ9H078 707 aa21.06■□□□□ 0.96
CDKN3-204ENST00000442975 USP29Q9HBJ7 922 aa21.06■□□□□ 0.96
CDKN3-204ENST00000442975 MRPL40Q9NQ50 206 aaKnown RBP21.06■□□□□ 0.96
CDKN3-204ENST00000442975 SIRPGQ9P1W8 387 aa21.06■□□□□ 0.96
CDKN3-204ENST00000442975 SAE1Q9UBE0 346 aaPredicted RBP21.06■□□□□ 0.96
CDKN3-204ENST00000442975 CD84Q9UIB8 345 aa21.06■□□□□ 0.96
CDKN3-204ENST00000442975 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.06■□□□□ 0.96
CDKN3-204ENST00000442975 CACNA1BQ00975 2339 aa21.05■□□□□ 0.96
CDKN3-204ENST00000442975 RCCD1A6NED2 376 aa21.05■□□□□ 0.96
CDKN3-204ENST00000442975 TPP1O14773 563 aa21.05■□□□□ 0.96
CDKN3-204ENST00000442975 YY2O15391 372 aa21.05■□□□□ 0.96
CDKN3-204ENST00000442975 PECAM1P16284 738 aaPredicted RBP21.05■□□□□ 0.96
CDKN3-204ENST00000442975 E2F1Q01094 437 aa21.05■□□□□ 0.96
CDKN3-204ENST00000442975 TARDBPQ13148 414 aaKnown RBP eCLIP21.05■□□□□ 0.96
CDKN3-204ENST00000442975 C6orf132Q5T0Z8 1188 aa21.05■□□□□ 0.96
CDKN3-204ENST00000442975 CRTC1Q6UUV9 634 aa21.05■□□□□ 0.96
CDKN3-204ENST00000442975 EFL1Q7Z2Z2 1120 aaKnown RBP21.05■□□□□ 0.96
CDKN3-204ENST00000442975 SLC35F3Q8IY50 421 aa21.05■□□□□ 0.96
CDKN3-204ENST00000442975 KATNAL2Q8IYT4 538 aa21.05■□□□□ 0.96
CDKN3-204ENST00000442975 CNTD1Q8N815 330 aa21.05■□□□□ 0.96
CDKN3-204ENST00000442975 MAPK15Q8TD08 544 aa21.05■□□□□ 0.96
CDKN3-204ENST00000442975 KRT35Q92764 455 aa21.05■□□□□ 0.96
CDKN3-204ENST00000442975 RBM41Q96IZ5 413 aaKnown RBP21.05■□□□□ 0.96
CDKN3-204ENST00000442975 BAG1Q99933 345 aaPredicted RBP21.05■□□□□ 0.96
CDKN3-204ENST00000442975 LGR4Q9BXB1 951 aa21.05■□□□□ 0.96
CDKN3-204ENST00000442975 PHPT1Q9NRX4 125 aaPredicted RBP21.05■□□□□ 0.96
CDKN3-204ENST00000442975 SALL4Q9UJQ4 1053 aa21.05■□□□□ 0.96
CDKN3-204ENST00000442975 CLCA2Q9UQC9 943 aa21.05■□□□□ 0.96
CDKN3-204ENST00000442975 REXO2Q9Y3B8 237 aaKnown RBP21.05■□□□□ 0.96
CDKN3-204ENST00000442975 TRABD2BA6NFA1 517 aa21.04■□□□□ 0.96
CDKN3-204ENST00000442975 PDE2AO00408 941 aaPredicted RBP21.04■□□□□ 0.96
CDKN3-204ENST00000442975 KRT37O76014 449 aa21.04■□□□□ 0.96
CDKN3-204ENST00000442975 TNFP01375 233 aa21.04■□□□□ 0.96
CDKN3-204ENST00000442975 MMP2P08253 660 aa21.04■□□□□ 0.96
CDKN3-204ENST00000442975 MYCLP1P12525 358 aaPredicted RBP21.04■□□□□ 0.96
CDKN3-204ENST00000442975 RPIAP49247 311 aa21.04■□□□□ 0.96
CDKN3-204ENST00000442975 SKOR1P84550 965 aa21.04■□□□□ 0.96
CDKN3-204ENST00000442975 GALNT3Q14435 633 aa21.04■□□□□ 0.96
CDKN3-204ENST00000442975 TAZQ16635 292 aa21.04■□□□□ 0.96
CDKN3-204ENST00000442975 TFDP3Q5H9I0 405 aa21.04■□□□□ 0.96
CDKN3-204ENST00000442975 RFLNAQ6ZTI6 216 aa21.04■□□□□ 0.96
CDKN3-204ENST00000442975 KIAA1328Q86T90 577 aa21.04■□□□□ 0.96
CDKN3-204ENST00000442975 SCG3Q8WXD2 468 aaKnown RBP21.04■□□□□ 0.96
CDKN3-204ENST00000442975 RBM15Q96T37 977 aaKnown RBP eCLIP21.04■□□□□ 0.96
CDKN3-204ENST00000442975 BRD8Q9H0E9 1235 aa21.04■□□□□ 0.96
CDKN3-204ENST00000442975 ABCG4Q9H172 646 aa21.04■□□□□ 0.96
CDKN3-204ENST00000442975 CYP4F12Q9HCS2 524 aa21.04■□□□□ 0.96
CDKN3-204ENST00000442975 KCTD5Q9NXV2 234 aa21.04■□□□□ 0.96
CDKN3-204ENST00000442975 GULP1Q9UBP9 304 aa21.04■□□□□ 0.96
CDKN3-204ENST00000442975 DNPEPQ9ULA0 475 aa21.04■□□□□ 0.96
CDKN3-204ENST00000442975 PPIL1Q9Y3C6 166 aa21.04■□□□□ 0.96
CDKN3-204ENST00000442975 hCG_1818297A0A087WSY0 165 aa21.03■□□□□ 0.96
CDKN3-204ENST00000442975 MACROD2A1Z1Q3 448 aa21.03■□□□□ 0.96
CDKN3-204ENST00000442975 OPA1O60313 960 aa21.03■□□□□ 0.96
CDKN3-204ENST00000442975 ZRANB2O95218 330 aaKnown RBP eCLIP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms