RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 CES1P23141 567 aa18.93■□□□□ 0.62
HMGB3P22-201ENST00000442010 NFKBIAP25963 317 aa18.93■□□□□ 0.62
HMGB3P22-201ENST00000442010 PPIDQ08752 370 aaKnown RBP18.93■□□□□ 0.62
HMGB3P22-201ENST00000442010 ITKQ08881 620 aa18.93■□□□□ 0.62
HMGB3P22-201ENST00000442010 NIPAL4Q0D2K0 466 aa18.93■□□□□ 0.62
HMGB3P22-201ENST00000442010 PERM1Q5SV97 790 aa18.93■□□□□ 0.62
HMGB3P22-201ENST00000442010 EFL1Q7Z2Z2 1120 aaKnown RBP18.93■□□□□ 0.62
HMGB3P22-201ENST00000442010 RD3Q7Z3Z2 195 aa18.93■□□□□ 0.62
HMGB3P22-201ENST00000442010 TECPR1Q7Z6L1 1165 aa18.93■□□□□ 0.62
HMGB3P22-201ENST00000442010 CCDC13Q8IYE1 715 aa18.93■□□□□ 0.62
HMGB3P22-201ENST00000442010 OR56A4Q8NGH8 313 aa18.93■□□□□ 0.62
HMGB3P22-201ENST00000442010 TPCN2Q8NHX9 752 aa18.93■□□□□ 0.62
HMGB3P22-201ENST00000442010 SMIM14Q96QK8 99 aa18.93■□□□□ 0.62
HMGB3P22-201ENST00000442010 TDRD1Q9BXT4 1180 aaKnown RBP18.93■□□□□ 0.62
HMGB3P22-201ENST00000442010 TRIM5Q9C035 493 aa18.93■□□□□ 0.62
HMGB3P22-201ENST00000442010 MRPL40Q9NQ50 206 aaKnown RBP18.93■□□□□ 0.62
HMGB3P22-201ENST00000442010 KCTD5Q9NXV2 234 aa18.93■□□□□ 0.62
HMGB3P22-201ENST00000442010 A0A0J9YYE9 177 aa18.92■□□□□ 0.62
HMGB3P22-201ENST00000442010 A0A0U1RQS6 177 aa18.92■□□□□ 0.62
HMGB3P22-201ENST00000442010 CPED1A4D0V7 1026 aa18.92■□□□□ 0.62
HMGB3P22-201ENST00000442010 CACNB4O00305 520 aaPredicted RBP18.92■□□□□ 0.62
HMGB3P22-201ENST00000442010 TNFP01375 233 aa18.92■□□□□ 0.62
HMGB3P22-201ENST00000442010 TRBC1P01850 177 aa18.92■□□□□ 0.62
HMGB3P22-201ENST00000442010 CTSEP14091 401 aa18.92■□□□□ 0.62
HMGB3P22-201ENST00000442010 CTPS1P17812 591 aa18.92■□□□□ 0.62
HMGB3P22-201ENST00000442010 ETV3P41162 512 aa18.92■□□□□ 0.62
HMGB3P22-201ENST00000442010 SLC1A1P43005 524 aa18.92■□□□□ 0.62
HMGB3P22-201ENST00000442010 HADHBP55084 474 aaKnown RBP18.92■□□□□ 0.62
HMGB3P22-201ENST00000442010 ZFYVE27Q5T4F4 411 aa18.92■□□□□ 0.62
HMGB3P22-201ENST00000442010 USP45Q70EL2 814 aa18.92■□□□□ 0.62
HMGB3P22-201ENST00000442010 MAPK15Q8TD08 544 aa18.92■□□□□ 0.62
HMGB3P22-201ENST00000442010 LGMNQ99538 433 aa18.92■□□□□ 0.62
HMGB3P22-201ENST00000442010 TEX101Q9BY14 249 aa18.92■□□□□ 0.62
HMGB3P22-201ENST00000442010 WDR26Q9H7D7 661 aa18.92■□□□□ 0.62
HMGB3P22-201ENST00000442010 PCDHB1Q9Y5F3 818 aa18.92■□□□□ 0.62
HMGB3P22-201ENST00000442010 CASC3O15234 703 aaKnown RBP18.91■□□□□ 0.62
HMGB3P22-201ENST00000442010 MMP2P08253 660 aa18.91■□□□□ 0.62
HMGB3P22-201ENST00000442010 MYCLP1P12525 358 aaPredicted RBP18.91■□□□□ 0.62
HMGB3P22-201ENST00000442010 KELP23276 732 aa18.91■□□□□ 0.62
HMGB3P22-201ENST00000442010 TEAD1P28347 426 aa18.91■□□□□ 0.62
HMGB3P22-201ENST00000442010 IFI35P80217 286 aaPredicted RBP18.91■□□□□ 0.62
HMGB3P22-201ENST00000442010 PTSQ03393 145 aa18.91■□□□□ 0.62
HMGB3P22-201ENST00000442010 DENND2CQ68D51 928 aa18.91■□□□□ 0.62
HMGB3P22-201ENST00000442010 CRTC1Q6UUV9 634 aa18.91■□□□□ 0.62
HMGB3P22-201ENST00000442010 Q6ZVL8 140 aa18.91■□□□□ 0.62
HMGB3P22-201ENST00000442010 CNTD1Q8N815 330 aa18.91■□□□□ 0.62
HMGB3P22-201ENST00000442010 ARL10Q8N8L6 244 aa18.91■□□□□ 0.62
HMGB3P22-201ENST00000442010 GLMNQ92990 594 aa18.91■□□□□ 0.62
HMGB3P22-201ENST00000442010 OLFM3Q96PB7 478 aa18.91■□□□□ 0.62
HMGB3P22-201ENST00000442010 RALYQ9UKM9 306 aaKnown RBP18.91■□□□□ 0.62
HMGB3P22-201ENST00000442010 HYOU1Q9Y4L1 999 aa18.91■□□□□ 0.62
HMGB3P22-201ENST00000442010 A0A087WV48 116 aa18.9■□□□□ 0.62
HMGB3P22-201ENST00000442010 TLX3O43711 291 aaPredicted RBP18.9■□□□□ 0.62
HMGB3P22-201ENST00000442010 SOD1P00441 154 aa18.9■□□□□ 0.62
HMGB3P22-201ENST00000442010 FUCA1P04066 466 aa18.9■□□□□ 0.62
HMGB3P22-201ENST00000442010 COMTP21964 271 aa18.9■□□□□ 0.62
HMGB3P22-201ENST00000442010 RPIAP49247 311 aa18.9■□□□□ 0.62
HMGB3P22-201ENST00000442010 DPTQ07507 201 aa18.9■□□□□ 0.62
HMGB3P22-201ENST00000442010 ZBTB17Q13105 803 aa18.9■□□□□ 0.62
HMGB3P22-201ENST00000442010 ARHGEF7Q14155 803 aa18.9■□□□□ 0.62
HMGB3P22-201ENST00000442010 TCEA2Q15560 299 aa18.9■□□□□ 0.62
HMGB3P22-201ENST00000442010 TAZQ16635 292 aa18.9■□□□□ 0.62
HMGB3P22-201ENST00000442010 LRRC66Q68CR7 880 aa18.9■□□□□ 0.62
HMGB3P22-201ENST00000442010 RFLNAQ6ZTI6 216 aa18.9■□□□□ 0.62
HMGB3P22-201ENST00000442010 HEATR4Q86WZ0 1026 aa18.9■□□□□ 0.62
HMGB3P22-201ENST00000442010 GKN2Q86XP6 184 aa18.9■□□□□ 0.62
HMGB3P22-201ENST00000442010 RHOT1Q8IXI2 618 aa18.9■□□□□ 0.62
HMGB3P22-201ENST00000442010 KYQ8NBH2 561 aa18.9■□□□□ 0.62
HMGB3P22-201ENST00000442010 CCNYQ8ND76 341 aa18.9■□□□□ 0.62
HMGB3P22-201ENST00000442010 NAT6Q93015 286 aa18.9■□□□□ 0.62
HMGB3P22-201ENST00000442010 DEPDC7Q96QD5 511 aa18.9■□□□□ 0.62
HMGB3P22-201ENST00000442010 ABCG4Q9H172 646 aa18.9■□□□□ 0.62
HMGB3P22-201ENST00000442010 PADI4Q9UM07 663 aa18.9■□□□□ 0.62
HMGB3P22-201ENST00000442010 DOLKQ9UPQ8 538 aa18.9■□□□□ 0.62
HMGB3P22-201ENST00000442010 CHKBQ9Y259 395 aa18.9■□□□□ 0.62
HMGB3P22-201ENST00000442010 AK5Q9Y6K8 562 aa18.9■□□□□ 0.62
HMGB3P22-201ENST00000442010 PTPRQQ9UMZ3 2332 aa18.9■□□□□ 0.62
HMGB3P22-201ENST00000442010 PRSS38A1L453 326 aa18.89■□□□□ 0.61
HMGB3P22-201ENST00000442010 KCNK1O00180 336 aa18.89■□□□□ 0.61
HMGB3P22-201ENST00000442010 APOL1O14791 398 aa18.89■□□□□ 0.61
HMGB3P22-201ENST00000442010 CSO75390 466 aaKnown RBP18.89■□□□□ 0.61
HMGB3P22-201ENST00000442010 JCHAINP01591 159 aa18.89■□□□□ 0.61
HMGB3P22-201ENST00000442010 KRT1P04264 644 aa18.89■□□□□ 0.61
HMGB3P22-201ENST00000442010 CEACAM5P06731 702 aa18.89■□□□□ 0.61
HMGB3P22-201ENST00000442010 ZNF30P17039 623 aa18.89■□□□□ 0.61
HMGB3P22-201ENST00000442010 MAGEA1P43355 309 aa18.89■□□□□ 0.61
HMGB3P22-201ENST00000442010 CDK3Q00526 305 aa18.89■□□□□ 0.61
HMGB3P22-201ENST00000442010 ISXQ2M1V0 245 aa18.89■□□□□ 0.61
HMGB3P22-201ENST00000442010 OGFOD3Q6PK18 319 aa18.89■□□□□ 0.61
HMGB3P22-201ENST00000442010 NPNTQ6UXI9 565 aa18.89■□□□□ 0.61
HMGB3P22-201ENST00000442010 NLRP8Q86W28 1048 aa18.89■□□□□ 0.61
HMGB3P22-201ENST00000442010 NDUFAF2Q8N183 169 aa18.89■□□□□ 0.61
HMGB3P22-201ENST00000442010 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.89■□□□□ 0.61
HMGB3P22-201ENST00000442010 GPR156Q8NFN8 814 aa18.89■□□□□ 0.61
HMGB3P22-201ENST00000442010 SCG3Q8WXD2 468 aaKnown RBP18.89■□□□□ 0.61
HMGB3P22-201ENST00000442010 RNF25Q96BH1 459 aaPredicted RBP18.89■□□□□ 0.61
HMGB3P22-201ENST00000442010 ZNF830Q96NB3 372 aaPredicted RBP18.89■□□□□ 0.61
HMGB3P22-201ENST00000442010 LYSMD1Q96S90 227 aa18.89■□□□□ 0.61
HMGB3P22-201ENST00000442010 FRMD8Q9BZ67 464 aaPredicted RBP18.89■□□□□ 0.61
HMGB3P22-201ENST00000442010 TMEM168Q9H0V1 697 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms