RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 TP53I13Q8NBR0 393 aaPredicted RBP18.27■□□□□ 0.52
SMPD4-210ENST00000441135 PDLIM2Q96JY6 352 aa18.27■□□□□ 0.52
SMPD4-210ENST00000441135 TBATAQ96M53 351 aa18.27■□□□□ 0.52
SMPD4-210ENST00000441135 QKIQ96PU8 341 aaKnown RBP eCLIP18.27■□□□□ 0.52
SMPD4-210ENST00000441135 TDRD1Q9BXT4 1180 aaKnown RBP18.27■□□□□ 0.52
SMPD4-210ENST00000441135 KCTD5Q9NXV2 234 aa18.27■□□□□ 0.52
SMPD4-210ENST00000441135 NCKIPSDQ9NZQ3 722 aa18.27■□□□□ 0.52
SMPD4-210ENST00000441135 DNPEPQ9ULA0 475 aa18.27■□□□□ 0.52
SMPD4-210ENST00000441135 K7ESM1 405 aa18.26■□□□□ 0.51
SMPD4-210ENST00000441135 PSMD11O00231 422 aa18.26■□□□□ 0.51
SMPD4-210ENST00000441135 FTCDO95954 541 aa18.26■□□□□ 0.51
SMPD4-210ENST00000441135 PYGMP11217 842 aa18.26■□□□□ 0.51
SMPD4-210ENST00000441135 C6P13671 934 aa18.26■□□□□ 0.51
SMPD4-210ENST00000441135 JUNDP17535 347 aa18.26■□□□□ 0.51
SMPD4-210ENST00000441135 DSC2Q02487 901 aa18.26■□□□□ 0.51
SMPD4-210ENST00000441135 EIF2B5Q13144 721 aaKnown RBP18.26■□□□□ 0.51
SMPD4-210ENST00000441135 LRRC14Q15048 493 aa18.26■□□□□ 0.51
SMPD4-210ENST00000441135 IRF4Q15306 451 aa18.26■□□□□ 0.51
SMPD4-210ENST00000441135 TPRG1LQ5T0D9 272 aa18.26■□□□□ 0.51
SMPD4-210ENST00000441135 USP45Q70EL2 814 aa18.26■□□□□ 0.51
SMPD4-210ENST00000441135 MARCH9Q86YJ5 346 aa18.26■□□□□ 0.51
SMPD4-210ENST00000441135 CACTIN-AS1Q8N1I8 211 aa18.26■□□□□ 0.51
SMPD4-210ENST00000441135 MDM1Q8TC05 714 aa18.26■□□□□ 0.51
SMPD4-210ENST00000441135 PIH1D2Q8WWB5 315 aa18.26■□□□□ 0.51
SMPD4-210ENST00000441135 NXPE2Q96DL1 559 aa18.26■□□□□ 0.51
SMPD4-210ENST00000441135 SCRN2Q96FV2 425 aa18.26■□□□□ 0.51
SMPD4-210ENST00000441135 ALS2CR12Q96Q35 445 aa18.26■□□□□ 0.51
SMPD4-210ENST00000441135 SLC25A51Q9H1U9 297 aa18.26■□□□□ 0.51
SMPD4-210ENST00000441135 SAE1Q9UBE0 346 aaPredicted RBP18.26■□□□□ 0.51
SMPD4-210ENST00000441135 ANKRD11Q6UB99 2663 aaPredicted RBP18.26■□□□□ 0.51
SMPD4-210ENST00000441135 PLXNB3Q9ULL4 1909 aa18.25■□□□□ 0.51
SMPD4-210ENST00000441135 ARID1BQ8NFD5 2236 aaPredicted RBP18.25■□□□□ 0.51
SMPD4-210ENST00000441135 DMXL2Q8TDJ6 3036 aa18.25■□□□□ 0.51
SMPD4-210ENST00000441135 TTC24A2A3L6 582 aaPredicted RBP18.25■□□□□ 0.51
SMPD4-210ENST00000441135 TAF4O00268 1085 aa18.25■□□□□ 0.51
SMPD4-210ENST00000441135 AQP9O43315 295 aa18.25■□□□□ 0.51
SMPD4-210ENST00000441135 CYP2A6P11509 494 aaPredicted RBP18.25■□□□□ 0.51
SMPD4-210ENST00000441135 PTPN3P26045 913 aa18.25■□□□□ 0.51
SMPD4-210ENST00000441135 LIG3P49916 1009 aa18.25■□□□□ 0.51
SMPD4-210ENST00000441135 DUSP3P51452 185 aaPredicted RBP18.25■□□□□ 0.51
SMPD4-210ENST00000441135 NIPAL4Q0D2K0 466 aa18.25■□□□□ 0.51
SMPD4-210ENST00000441135 CCDC181Q5TID7 509 aa18.25■□□□□ 0.51
SMPD4-210ENST00000441135 ZCCHC8Q6NZY4 707 aaKnown RBP18.25■□□□□ 0.51
SMPD4-210ENST00000441135 LIPIQ6XZB0 460 aa18.25■□□□□ 0.51
SMPD4-210ENST00000441135 KDM7AQ6ZMT4 941 aa18.25■□□□□ 0.51
SMPD4-210ENST00000441135 RAVER1Q8IY67 606 aaKnown RBP18.25■□□□□ 0.51
SMPD4-210ENST00000441135 TTC13Q8NBP0 860 aa18.25■□□□□ 0.51
SMPD4-210ENST00000441135 LRRN4Q8WUT4 740 aa18.25■□□□□ 0.51
SMPD4-210ENST00000441135 TADA1Q96BN2 335 aa18.25■□□□□ 0.51
SMPD4-210ENST00000441135 IMP4Q96G21 291 aaKnown RBP18.25■□□□□ 0.51
SMPD4-210ENST00000441135 APOLD1Q96LR9 279 aa18.25■□□□□ 0.51
SMPD4-210ENST00000441135 TEKT5Q96M29 485 aa18.25■□□□□ 0.51
SMPD4-210ENST00000441135 FERMT1Q9BQL6 677 aa18.25■□□□□ 0.51
SMPD4-210ENST00000441135 HERPUD2Q9BSE4 406 aa18.25■□□□□ 0.51
SMPD4-210ENST00000441135 HEMGNQ9BXL5 484 aa18.25■□□□□ 0.51
SMPD4-210ENST00000441135 MBNL1Q9NR56 388 aaKnown RBP18.25■□□□□ 0.51
SMPD4-210ENST00000441135 SPASTQ9UBP0 616 aa18.25■□□□□ 0.51
SMPD4-210ENST00000441135 B4GALT6Q9UBX8 382 aa18.25■□□□□ 0.51
SMPD4-210ENST00000441135 APOBEC3BQ9UH17 382 aaKnown RBP18.25■□□□□ 0.51
SMPD4-210ENST00000441135 KLF15Q9UIH9 416 aa18.25■□□□□ 0.51
SMPD4-210ENST00000441135 PPP2R2CQ9Y2T4 447 aa18.25■□□□□ 0.51
SMPD4-210ENST00000441135 TTLL3Q9Y4R7 772 aa18.25■□□□□ 0.51
SMPD4-210ENST00000441135 LRRK1Q38SD2 2015 aa18.25■□□□□ 0.51
SMPD4-210ENST00000441135 GOLGA6L9A6NEM1 432 aa18.24■□□□□ 0.51
SMPD4-210ENST00000441135 TPP1O14773 563 aa18.24■□□□□ 0.51
SMPD4-210ENST00000441135 LZTS3O60299 673 aaPredicted RBP18.24■□□□□ 0.51
SMPD4-210ENST00000441135 GP1BAP07359 652 aa18.24■□□□□ 0.51
SMPD4-210ENST00000441135 MMP2P08253 660 aa18.24■□□□□ 0.51
SMPD4-210ENST00000441135 ELFN1P0C7U0 828 aa18.24■□□□□ 0.51
SMPD4-210ENST00000441135 VIPR1P32241 457 aa18.24■□□□□ 0.51
SMPD4-210ENST00000441135 SKOR1P84550 965 aa18.24■□□□□ 0.51
SMPD4-210ENST00000441135 WASHC5Q12768 1159 aa18.24■□□□□ 0.51
SMPD4-210ENST00000441135 IHHQ14623 411 aa18.24■□□□□ 0.51
SMPD4-210ENST00000441135 LLGL1Q15334 1064 aa18.24■□□□□ 0.51
SMPD4-210ENST00000441135 WSCD2Q2TBF2 565 aa18.24■□□□□ 0.51
SMPD4-210ENST00000441135 PHACTR4Q8IZ21 702 aa18.24■□□□□ 0.51
SMPD4-210ENST00000441135 CBARPQ8N350 705 aaPredicted RBP18.24■□□□□ 0.51
SMPD4-210ENST00000441135 TRIM58Q8NG06 486 aa18.24■□□□□ 0.51
SMPD4-210ENST00000441135 ACTL9Q8TC94 416 aa18.24■□□□□ 0.51
SMPD4-210ENST00000441135 LMX1AQ8TE12 382 aa18.24■□□□□ 0.51
SMPD4-210ENST00000441135 PDCD6IPQ8WUM4 868 aaKnown RBP18.24■□□□□ 0.51
SMPD4-210ENST00000441135 HTR3CQ8WXA8 447 aa18.24■□□□□ 0.51
SMPD4-210ENST00000441135 HAUS1Q96CS2 278 aa18.24■□□□□ 0.51
SMPD4-210ENST00000441135 LYSMD1Q96S90 227 aa18.24■□□□□ 0.51
SMPD4-210ENST00000441135 SLC13A1Q9BZW2 595 aa18.24■□□□□ 0.51
SMPD4-210ENST00000441135 TRHDEQ9UKU6 1024 aa18.24■□□□□ 0.51
SMPD4-210ENST00000441135 PACSIN2Q9UNF0 486 aaPredicted RBP18.24■□□□□ 0.51
SMPD4-210ENST00000441135 CFAP47Q6ZTR5 3102 aa18.23■□□□□ 0.51
SMPD4-210ENST00000441135 A0A0J9YYE9 177 aa18.23■□□□□ 0.51
SMPD4-210ENST00000441135 HEXIM1O94992 359 aaKnown RBP18.23■□□□□ 0.51
SMPD4-210ENST00000441135 PRLP01236 227 aa18.23■□□□□ 0.51
SMPD4-210ENST00000441135 TRBC1P01850 177 aa18.23■□□□□ 0.51
SMPD4-210ENST00000441135 ZNF30P17039 623 aa18.23■□□□□ 0.51
SMPD4-210ENST00000441135 HTR1BP28222 390 aa18.23■□□□□ 0.51
SMPD4-210ENST00000441135 BLKP51451 505 aa18.23■□□□□ 0.51
SMPD4-210ENST00000441135 CLDN6P56747 220 aa18.23■□□□□ 0.51
SMPD4-210ENST00000441135 INSM1Q01101 510 aaPredicted RBP18.23■□□□□ 0.51
SMPD4-210ENST00000441135 OTUD4Q01804 1114 aaKnown RBP18.23■□□□□ 0.51
SMPD4-210ENST00000441135 CYP4F3Q08477 520 aa18.23■□□□□ 0.51
SMPD4-210ENST00000441135 TARDBPQ13148 414 aaKnown RBP eCLIP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms