RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 ZBTB9Q96C00 473 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 MRPL38Q96DV4 380 aaKnown RBP4□□□□□ -1.77
HMGB1P37-201ENST00000439613 TCEAL4Q96EI5 215 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 MYEOVQ96EZ4 313 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 CERS2Q96G23 380 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 SGSM3Q96HU1 749 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 NUDCD1Q96RS6 583 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 CPNE1Q99829 537 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 SELENOSQ9BQE4 189 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 MGME1Q9BQP7 344 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 WDR83Q9BRX9 315 aaKnown RBP4□□□□□ -1.77
HMGB1P37-201ENST00000439613 CEP44Q9C0F1 390 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 NKX2-4Q9H2Z4 354 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 KCNK9Q9NPC2 374 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 PPANQ9NQ55 473 aaKnown RBP4□□□□□ -1.77
HMGB1P37-201ENST00000439613 C20orf96Q9NUD7 363 aaPredicted RBP4□□□□□ -1.77
HMGB1P37-201ENST00000439613 ABCB8Q9NUT2 735 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 INTS9Q9NV88 658 aaKnown RBP4□□□□□ -1.77
HMGB1P37-201ENST00000439613 THG1LQ9NWX6 298 aaKnown RBP4□□□□□ -1.77
HMGB1P37-201ENST00000439613 OBP2AQ9NY56 170 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 UBP1Q9NZI7 540 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 LMCD1Q9NZU5 365 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 HACD3Q9P035 362 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 PRKAG3Q9UGI9 489 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 TBK1Q9UHD2 729 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 SLC25A13Q9UJS0 675 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 RIMKLBQ9ULI2 386 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 PPM1HQ9ULR3 514 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 RPL26L1Q9UNX3 145 aaKnown RBP4□□□□□ -1.77
HMGB1P37-201ENST00000439613 PCDHGB7Q9Y5F8 929 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 OR51B4Q9Y5P0 310 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 HCFC2Q9Y5Z7 792 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 LOC100289279A0A1B0GTE1 492 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 ZCWPW2A0A1B0GU75 182 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 A0A1W2PQ67 120 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 TMEM120BA0PK00 339 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 MEGF11A6BM72 1044 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 GMNCA6NCL1 334 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 MROH6A6NGR9 719 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 C2orf81A6NN90 581 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 TRIM49D1C9J1S8 452 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 F8W735 103 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 PFDN6O15212 129 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 TM9SF1O15321 606 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 SLC7A4O43246 635 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 TIMM44O43615 452 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 TMCC1O94876 653 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 CSPG5O95196 566 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 NFATC1O95644 943 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 POP4O95707 220 aaKnown RBP3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 CRTAMO95727 393 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 IGSF6O95976 241 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 GSRP00390 522 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 C1QAP02745 245 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 ASLP04424 464 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 ITGB2P05107 769 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 CHN1P15882 459 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 GJA1P17302 382 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 CEBPBP17676 345 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 TPH1P17752 444 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 KRT4P19013 534 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 CR2P20023 1033 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 NFKBIAP25963 317 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 LSP1P33241 339 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 GP5P40197 560 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 NNMTP40261 264 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 CSKP41240 450 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 GATA4P43694 442 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 CCT5P48643 541 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 SCNN1BP51168 640 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 SGSHP51688 502 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 MAXP61244 160 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 RHOAP61586 193 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 SNRPD1P62314 119 aaKnown RBP3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 GNGT1P63211 74 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 NTHL1P78549 312 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 CRADDP78560 199 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 ARF5P84085 180 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 ZXDBP98169 803 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 ECT2LQ008S8 904 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 IL9RQ01113 521 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 GUCY1A3Q02108 690 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 SLC18A2Q05940 514 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 RAD51Q06609 339 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 MTM1Q13496 603 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 THOC5Q13769 683 aaKnown RBP3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 POU6F1Q14863 301 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 PDGFRLQ15198 375 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 POU4F3Q15319 338 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 CYTH1Q15438 398 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 ZNF77Q15935 545 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 SLC5A9Q2M3M2 681 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 PLEKHG6Q3KR16 790 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 FSCBQ5H9T9 825 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 PITRM1Q5JRX3 1037 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 SIRPB2Q5JXA9 342 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 EXOSC6Q5RKV6 272 aaKnown RBP3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 ATAT1Q5SQI0 421 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 STXBP5Q5T5C0 1151 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 TEDDM1Q5T9Z0 273 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms