RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 PCDHGC5Q9Y5F6 944 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 EDDM13A0A1B0GTR0 161 aa12.1□□□□□ -0.47
NEK1-201ENST00000439128 CFAP73A6NFT4 308 aa12.1□□□□□ -0.47
NEK1-201ENST00000439128 MAN2B1O00754 1011 aa12.1□□□□□ -0.47
NEK1-201ENST00000439128 NDST3O95803 873 aa12.1□□□□□ -0.47
NEK1-201ENST00000439128 VARSP26640 1264 aaKnown RBP12.1□□□□□ -0.47
NEK1-201ENST00000439128 MLLT3P42568 568 aaPredicted RBP12.1□□□□□ -0.47
NEK1-201ENST00000439128 POLD2P49005 469 aa12.1□□□□□ -0.47
NEK1-201ENST00000439128 DAOAP59103 153 aa12.1□□□□□ -0.47
NEK1-201ENST00000439128 ELOAQ14241 798 aaKnown RBP12.1□□□□□ -0.47
NEK1-201ENST00000439128 EML3Q32P44 896 aa12.1□□□□□ -0.47
NEK1-201ENST00000439128 APTXQ7Z2E3 356 aaKnown RBP12.1□□□□□ -0.47
NEK1-201ENST00000439128 GKN2Q86XP6 184 aa12.1□□□□□ -0.47
NEK1-201ENST00000439128 GDPD5Q8WTR4 605 aa12.1□□□□□ -0.47
NEK1-201ENST00000439128 ZNF473Q8WTR7 871 aaKnown RBP12.1□□□□□ -0.47
NEK1-201ENST00000439128 KIAA1143Q96AT1 154 aaPredicted RBP12.1□□□□□ -0.47
NEK1-201ENST00000439128 NECTIN4Q96NY8 510 aa12.1□□□□□ -0.47
NEK1-201ENST00000439128 PLIN4Q96Q06 1357 aa12.1□□□□□ -0.47
NEK1-201ENST00000439128 SLC30A9Q6PML9 568 aa12.1□□□□□ -0.47
NEK1-201ENST00000439128 TPRG1Q6ZUI0 275 aa12.1□□□□□ -0.47
NEK1-201ENST00000439128 TMCO2Q7Z6W1 182 aaPredicted RBP12.1□□□□□ -0.47
NEK1-201ENST00000439128 MCMBPQ9BTE3 642 aa12.1□□□□□ -0.47
NEK1-201ENST00000439128 LZTS1Q9Y250 596 aa12.1□□□□□ -0.47
NEK1-201ENST00000439128 H3BQ06 376 aaPredicted RBP12.1□□□□□ -0.47
NEK1-201ENST00000439128 RPL4P36578 427 aaKnown RBP12.1□□□□□ -0.47
NEK1-201ENST00000439128 LRRC39Q96DD0 335 aa12.1□□□□□ -0.47
NEK1-201ENST00000439128 CSPG4P5Q96PW8 444 aa12.1□□□□□ -0.47
NEK1-201ENST00000439128 MYCBPQ99417 103 aaPredicted RBP12.1□□□□□ -0.47
NEK1-201ENST00000439128 CCDC134Q9H6E4 229 aa12.1□□□□□ -0.47
NEK1-201ENST00000439128 IQCF5A8MTL0 148 aa12.1□□□□□ -0.47
NEK1-201ENST00000439128 LIASO43766 372 aa12.1□□□□□ -0.47
NEK1-201ENST00000439128 PRLRP16471 622 aa12.1□□□□□ -0.47
NEK1-201ENST00000439128 TSPAN8P19075 237 aa12.1□□□□□ -0.47
NEK1-201ENST00000439128 PAICSP22234 425 aaKnown RBP12.1□□□□□ -0.47
NEK1-201ENST00000439128 CASP12Q6UXS9 341 aa12.1□□□□□ -0.47
NEK1-201ENST00000439128 SH3RF1Q7Z6J0 888 aa12.1□□□□□ -0.47
NEK1-201ENST00000439128 CDYL2Q8N8U2 506 aa12.1□□□□□ -0.47
NEK1-201ENST00000439128 EMID1Q96A84 441 aaPredicted RBP12.1□□□□□ -0.47
NEK1-201ENST00000439128 SEPHS2Q99611 448 aa12.1□□□□□ -0.47
NEK1-201ENST00000439128 TMEM120AQ9BXJ8 343 aa12.1□□□□□ -0.47
NEK1-201ENST00000439128 TMEM245Q9H330 911 aa12.1□□□□□ -0.47
NEK1-201ENST00000439128 COPS7AQ9UBW8 275 aa12.1□□□□□ -0.47
NEK1-201ENST00000439128 NPEPPSL1A6NEC2 478 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 C5orf60A6NFR6 353 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 MFSD11O43934 449 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 MLYCDO95822 493 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 SLC35G6P0C7Q6 338 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 ACP5P13686 325 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 TYRP14679 529 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 RPL22P35268 128 aaKnown RBP12.09□□□□□ -0.47
NEK1-201ENST00000439128 FLT3P36888 993 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 PLGLB1Q02325 96 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 SCIMPQ6UWF3 145 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 PSMG2Q969U7 264 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 MAGEB18Q96M61 343 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 STRADBQ9C0K7 418 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 CYLDQ9NQC7 956 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 XPNPEP1Q9NQW7 623 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 SLC2A4RGQ9NR83 387 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 MCM8Q9UJA3 840 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 PRKCGP05129 697 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 RHOP08100 348 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 SERPINB3P29508 390 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 RPL3P39023 403 aaKnown RBP12.09□□□□□ -0.47
NEK1-201ENST00000439128 RPS24P62847 133 aaKnown RBP12.09□□□□□ -0.47
NEK1-201ENST00000439128 RPL38P63173 70 aaKnown RBP12.09□□□□□ -0.47
NEK1-201ENST00000439128 ZNF155Q12901 538 aaPredicted RBP12.09□□□□□ -0.47
NEK1-201ENST00000439128 ZC3H14Q6PJT7 736 aaKnown RBP12.09□□□□□ -0.47
NEK1-201ENST00000439128 ZCCHC23Q6ZST2 131 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 EQTNQ9NQ60 294 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 NINJ2Q9NZG7 142 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 CD207Q9UJ71 328 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 PCDHB3Q9Y5E6 796 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 hCG_1818297A0A087WSY0 165 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 SLC28A1O00337 649 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 PEX12O00623 359 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 PRMT5O14744 637 aaPredicted RBP12.09□□□□□ -0.47
NEK1-201ENST00000439128 OTCP00480 354 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 MSLNQ13421 630 aaPredicted RBP12.09□□□□□ -0.47
NEK1-201ENST00000439128 RNF19BQ6ZMZ0 732 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 REXO1L1PQ8IX06 675 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 CMTR2Q8IYT2 770 aaKnown RBP12.09□□□□□ -0.47
NEK1-201ENST00000439128 AGGF1Q8N302 714 aaeCLIP12.09□□□□□ -0.47
NEK1-201ENST00000439128 ZNF461Q8TAF7 563 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 PAPOLBQ9NRJ5 636 aaKnown RBP12.09□□□□□ -0.47
NEK1-201ENST00000439128 VPS45Q9NRW7 570 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 ADGRA3Q8IWK6 1321 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 LRIG2O94898 1065 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 CLK1P49759 484 aaKnown RBP12.09□□□□□ -0.47
NEK1-201ENST00000439128 TAS2R40P59535 323 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 RAB10P61026 200 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 KCNMA1Q12791 1236 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 TAPT1Q6NXT6 567 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 APOPT1Q96IL0 206 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 LEFTY2O00292 366 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 WNT7AO00755 349 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 PEX11AO75192 247 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 HGFP14210 728 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 NDST2P52849 883 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 MAPK10P53779 464 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms