RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 MYOCOSA0A1B0GUC4 107 aa13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 TMEM233B4DJY2 109 aa13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 CTSAP10619 480 aa13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 IRF1P10914 325 aa13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 TFEBP19484 476 aa13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 OR1E1P30953 314 aa13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 SLC11A2P49281 568 aa13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 SCNN1BP51168 640 aa13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 RENBPP51606 427 aa13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 SLC12A2P55011 1212 aa13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 KLF10Q13118 480 aa13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 MTA1Q13330 715 aa13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 CSHL1Q14406 222 aa13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 KIAA0930Q6ICG6 404 aaPredicted RBP13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 ACAD11Q709F0 780 aa13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 PTAR1Q7Z6K3 402 aaPredicted RBP13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 TMEM150AQ86TG1 271 aa13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 SPATA24Q86W54 205 aa13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 HPS6Q86YV9 775 aa13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 ST13P4Q8IZP2 240 aaPredicted RBP13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 RDH11Q8TC12 318 aa13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 PTCD2Q8WV60 388 aaKnown RBP13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 HEXDCQ8WVB3 486 aa13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 MARK4Q96L34 752 aa13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 GPR78Q96P69 363 aa13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 ZNF334Q9HCZ1 680 aaPredicted RBP13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 OBSL1O75147 1896 aa13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 TARM1B6A8C7 271 aa13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 HDAC3O15379 428 aa13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 RAMP2O60895 175 aa13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 STC2O76061 302 aa13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 KLKB1P03952 638 aa13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 COX4I1P13073 169 aa13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 ITGAXP20702 1163 aa13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 CORO1AP31146 461 aaKnown RBP13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 SERPINH1P50454 418 aaKnown RBP13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 HNRNPDQ14103 355 aaKnown RBP13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 EML3Q32P44 896 aa13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 LSM12Q3MHD2 195 aaKnown RBP13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 FSCBQ5H9T9 825 aa13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 PPM1LQ5SGD2 360 aa13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 TSTD2Q5T7W7 516 aa13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 TMEM198Q66K66 360 aa13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 PAOXQ6QHF9 649 aa13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 PLD4Q96BZ4 506 aa13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 IMP4Q96G21 291 aaKnown RBP13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 LENG8Q96PV6 779 aaPredicted RBP13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 OLFM1Q99784 485 aa13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 VCX3BQ9H321 246 aa13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 VCX3AQ9NNX9 186 aa13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 CDH22Q9UJ99 828 aa13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 SSX2IPQ9Y2D8 614 aa13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 INSL6Q9Y581 213 aa13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 TGM5O43548 720 aa13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 UQCRBP14927 111 aa13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 CREMQ03060 361 aa13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 POLD3Q15054 466 aaPredicted RBP13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 TRIP10Q15642 601 aa13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 TMEM240Q5SV17 173 aa13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 NXNQ6DKJ4 435 aa13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 LSMEM2Q8N112 164 aa13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 TXNDC5Q8NBS9 432 aaKnown RBP13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 CLP1Q92989 425 aaKnown RBP13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 MPP4Q96JB8 637 aa13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 PPP1R2P1Q96PQ5 205 aa13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 GCNAQ96QF7 691 aa13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 MRM3Q9HC36 420 aaKnown RBP13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 CYP4F12Q9HCS2 524 aa13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 TRPC7Q9HCX4 862 aa13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 SMPD4Q9NXE4 827 aa13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 UXTQ9UBK9 157 aaPredicted RBP13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 FIS1Q9Y3D6 152 aa13.92□□□□□ -0.18
PTCHD3-201ENST00000438700 HEATR9A2RTY3 570 aa13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 OR51F1A6NGY5 319 aa13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 HNRNPRO43390 633 aaKnown RBP13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 MMP2P08253 660 aa13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 PABPC4LP0CB38 370 aaKnown RBP13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 MAPKAPK2P49137 400 aa13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 TBL3Q12788 808 aaKnown RBP13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 MMEL1Q495T6 779 aa13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 RPS27LQ71UM5 84 aaKnown RBP13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 CCDC117Q8IWD4 279 aaPredicted RBP13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 GPR65Q8IYL9 337 aa13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 OR13J1Q8NGT2 312 aa13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 OR6P1Q8NGX9 317 aa13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 WBP2Q969T9 261 aa13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 PRKD2Q9BZL6 878 aa13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 MRPL46Q9H2W6 279 aaKnown RBP13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 POMKQ9H5K3 350 aa13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 MTF2Q9Y483 593 aaPredicted RBP13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 ZFP37Q9Y6Q3 630 aaPredicted RBP13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 LCHNA4D1U4 455 aa13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 CAPN8A6NHC0 703 aa13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 AIM2O14862 343 aa13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 GRID2O43424 1007 aa13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 CXCL14O95715 111 aa13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 COL6A2P12110 1019 aa13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 HNRNPLP14866 589 aaKnown RBP eCLIP13.91□□□□□ -0.18
PTCHD3-201ENST00000438700 GLDCP23378 1020 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms