RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 ST14Q9Y5Y6 855 aa18.19■□□□□ 0.5
GTF3A-204ENST00000438571 ZNF106Q9H2Y7 1883 aaKnown RBP18.18■□□□□ 0.5
GTF3A-204ENST00000438571 PIEZO2Q9H5I5 2752 aa18.18■□□□□ 0.5
GTF3A-204ENST00000438571 GZMAP12544 262 aa18.18■□□□□ 0.5
GTF3A-204ENST00000438571 AK4P27144 223 aaPredicted RBP18.18■□□□□ 0.5
GTF3A-204ENST00000438571 MLLT3P42568 568 aaPredicted RBP18.18■□□□□ 0.5
GTF3A-204ENST00000438571 KLHL30Q0D2K2 578 aa18.18■□□□□ 0.5
GTF3A-204ENST00000438571 DPYSL2Q16555 572 aa18.18■□□□□ 0.5
GTF3A-204ENST00000438571 PPP1R2P3Q6NXS1 205 aa18.18■□□□□ 0.5
GTF3A-204ENST00000438571 CCDC81Q6ZN84 652 aa18.18■□□□□ 0.5
GTF3A-204ENST00000438571 RFLNAQ6ZTI6 216 aa18.18■□□□□ 0.5
GTF3A-204ENST00000438571 HSD11B1LQ7Z5J1 315 aa18.18■□□□□ 0.5
GTF3A-204ENST00000438571 POLNQ7Z5Q5 900 aa18.18■□□□□ 0.5
GTF3A-204ENST00000438571 TSPAN33Q86UF1 283 aa18.18■□□□□ 0.5
GTF3A-204ENST00000438571 HEATR4Q86WZ0 1026 aa18.18■□□□□ 0.5
GTF3A-204ENST00000438571 PSTKQ8IV42 348 aaKnown RBP18.18■□□□□ 0.5
GTF3A-204ENST00000438571 PATE1Q8WXA2 126 aa18.18■□□□□ 0.5
GTF3A-204ENST00000438571 CCDC97Q96F63 343 aaPredicted RBP18.18■□□□□ 0.5
GTF3A-204ENST00000438571 CSPG4P5Q96PW8 444 aa18.18■□□□□ 0.5
GTF3A-204ENST00000438571 DPEP2Q9H4A9 486 aa18.18■□□□□ 0.5
GTF3A-204ENST00000438571 CARS2Q9HA77 564 aaKnown RBP18.18■□□□□ 0.5
GTF3A-204ENST00000438571 NOD2Q9HC29 1040 aa18.18■□□□□ 0.5
GTF3A-204ENST00000438571 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.18■□□□□ 0.5
GTF3A-204ENST00000438571 SPATS2LQ9NUQ6 558 aaKnown RBP18.18■□□□□ 0.5
GTF3A-204ENST00000438571 LRIT1Q9P2V4 623 aa18.18■□□□□ 0.5
GTF3A-204ENST00000438571 APPL1Q9UKG1 709 aa18.18■□□□□ 0.5
GTF3A-204ENST00000438571 NPIPB15A6NHN6 443 aaPredicted RBP18.17■□□□□ 0.5
GTF3A-204ENST00000438571 H3BRJ5 948 aa18.17■□□□□ 0.5
GTF3A-204ENST00000438571 MAFKO60675 156 aa18.17■□□□□ 0.5
GTF3A-204ENST00000438571 HEXIM1O94992 359 aaKnown RBP18.17■□□□□ 0.5
GTF3A-204ENST00000438571 HOXC4P09017 264 aaPredicted RBP18.17■□□□□ 0.5
GTF3A-204ENST00000438571 RARAP10276 462 aa18.17■□□□□ 0.5
GTF3A-204ENST00000438571 MYCLP1P12525 358 aaPredicted RBP18.17■□□□□ 0.5
GTF3A-204ENST00000438571 GLB1P16278 677 aa18.17■□□□□ 0.5
GTF3A-204ENST00000438571 VIPR1P32241 457 aa18.17■□□□□ 0.5
GTF3A-204ENST00000438571 ETV3P41162 512 aa18.17■□□□□ 0.5
GTF3A-204ENST00000438571 HCAR3P49019 387 aa18.17■□□□□ 0.5
GTF3A-204ENST00000438571 ZFP36L1Q07352 338 aaKnown RBP18.17■□□□□ 0.5
GTF3A-204ENST00000438571 CPNE8Q86YQ8 564 aa18.17■□□□□ 0.5
GTF3A-204ENST00000438571 SLITRK4Q8IW52 837 aa18.17■□□□□ 0.5
GTF3A-204ENST00000438571 WBP1Q96G27 269 aa18.17■□□□□ 0.5
GTF3A-204ENST00000438571 TMEM74Q96NL1 305 aa18.17■□□□□ 0.5
GTF3A-204ENST00000438571 NUDCD1Q96RS6 583 aa18.17■□□□□ 0.5
GTF3A-204ENST00000438571 MGME1Q9BQP7 344 aa18.17■□□□□ 0.5
GTF3A-204ENST00000438571 STRADBQ9C0K7 418 aa18.17■□□□□ 0.5
GTF3A-204ENST00000438571 SEMA6CQ9H3T2 930 aa18.17■□□□□ 0.5
GTF3A-204ENST00000438571 RDH14Q9HBH5 336 aa18.17■□□□□ 0.5
GTF3A-204ENST00000438571 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.17■□□□□ 0.5
GTF3A-204ENST00000438571 FOXJ2Q9P0K8 574 aa18.17■□□□□ 0.5
GTF3A-204ENST00000438571 PCDHGA7Q9Y5G6 932 aa18.17■□□□□ 0.5
GTF3A-204ENST00000438571 SCINQ9Y6U3 715 aa18.17■□□□□ 0.5
GTF3A-204ENST00000438571 TENM4Q6N022 2769 aa18.17■□□□□ 0.5
GTF3A-204ENST00000438571 PRAMEF33A0A0G2JMD5 474 aa18.16■□□□□ 0.5
GTF3A-204ENST00000438571 A0A1B0GTH6 734 aa18.16■□□□□ 0.5
GTF3A-204ENST00000438571 TNFRSF10CO14798 259 aa18.16■□□□□ 0.5
GTF3A-204ENST00000438571 PRAMEF10O60809 474 aa18.16■□□□□ 0.5
GTF3A-204ENST00000438571 SOCS5O75159 536 aa18.16■□□□□ 0.5
GTF3A-204ENST00000438571 CEACAM5P06731 702 aa18.16■□□□□ 0.5
GTF3A-204ENST00000438571 CTPS1P17812 591 aa18.16■□□□□ 0.5
GTF3A-204ENST00000438571 KELP23276 732 aa18.16■□□□□ 0.5
GTF3A-204ENST00000438571 PCK1P35558 622 aa18.16■□□□□ 0.5
GTF3A-204ENST00000438571 POLD2P49005 469 aa18.16■□□□□ 0.5
GTF3A-204ENST00000438571 RENBPP51606 427 aa18.16■□□□□ 0.5
GTF3A-204ENST00000438571 POLR2LP62875 67 aaKnown RBP18.16■□□□□ 0.5
GTF3A-204ENST00000438571 B4GALNT1Q00973 533 aa18.16■□□□□ 0.5
GTF3A-204ENST00000438571 EIF3IQ13347 325 aaKnown RBP18.16■□□□□ 0.5
GTF3A-204ENST00000438571 C16orf72Q14CZ0 275 aa18.16■□□□□ 0.5
GTF3A-204ENST00000438571 TMCO3Q6UWJ1 677 aa18.16■□□□□ 0.5
GTF3A-204ENST00000438571 OR6C4Q8NGE1 309 aa18.16■□□□□ 0.5
GTF3A-204ENST00000438571 DTD2Q96FN9 168 aa18.16■□□□□ 0.5
GTF3A-204ENST00000438571 ZNF599Q96NL3 588 aa18.16■□□□□ 0.5
GTF3A-204ENST00000438571 CCNL2Q96S94 520 aaPredicted RBP18.16■□□□□ 0.5
GTF3A-204ENST00000438571 BPIFA3Q9BQP9 254 aa18.16■□□□□ 0.5
GTF3A-204ENST00000438571 FRMD8Q9BZ67 464 aaPredicted RBP18.16■□□□□ 0.5
GTF3A-204ENST00000438571 ISCUQ9H1K1 167 aa18.16■□□□□ 0.5
GTF3A-204ENST00000438571 PCDH18Q9HCL0 1135 aa18.16■□□□□ 0.5
GTF3A-204ENST00000438571 PLEKHM1Q9Y4G2 1056 aa18.16■□□□□ 0.5
GTF3A-204ENST00000438571 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.15■□□□□ 0.5
GTF3A-204ENST00000438571 A0A1W2PQC6 194 aa18.15■□□□□ 0.5
GTF3A-204ENST00000438571 GOLGA6CA6NDK9 693 aa18.15■□□□□ 0.5
GTF3A-204ENST00000438571 GOLGA6BA6NDN3 693 aa18.15■□□□□ 0.5
GTF3A-204ENST00000438571 B4GAT1O43505 415 aa18.15■□□□□ 0.5
GTF3A-204ENST00000438571 MBD3O95983 291 aa18.15■□□□□ 0.5
GTF3A-204ENST00000438571 PDHA1P08559 390 aa18.15■□□□□ 0.5
GTF3A-204ENST00000438571 CD48P09326 243 aa18.15■□□□□ 0.5
GTF3A-204ENST00000438571 JMJD7P0C870 316 aa18.15■□□□□ 0.5
GTF3A-204ENST00000438571 GOLGA6DP0CG33 693 aa18.15■□□□□ 0.5
GTF3A-204ENST00000438571 CCNB1P14635 433 aa18.15■□□□□ 0.5
GTF3A-204ENST00000438571 ARL4AP40617 200 aa18.15■□□□□ 0.5
GTF3A-204ENST00000438571 GNPDA1P46926 289 aa18.15■□□□□ 0.5
GTF3A-204ENST00000438571 OR1D5P58170 312 aa18.15■□□□□ 0.5
GTF3A-204ENST00000438571 CDK3Q00526 305 aa18.15■□□□□ 0.5
GTF3A-204ENST00000438571 SLC25A11Q02978 314 aaKnown RBP18.15■□□□□ 0.5
GTF3A-204ENST00000438571 MMRN1Q13201 1228 aa18.15■□□□□ 0.5
GTF3A-204ENST00000438571 IHHQ14623 411 aa18.15■□□□□ 0.5
GTF3A-204ENST00000438571 HGSNATQ68CP4 663 aa18.15■□□□□ 0.5
GTF3A-204ENST00000438571 Q6ZVL8 140 aa18.15■□□□□ 0.5
GTF3A-204ENST00000438571 VASH2Q86V25 355 aa18.15■□□□□ 0.5
GTF3A-204ENST00000438571 CBARPQ8N350 705 aaPredicted RBP18.15■□□□□ 0.5
GTF3A-204ENST00000438571 ATPAF2Q8N5M1 289 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms