RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 PPP1R3GB7ZBB8 358 aa11.08□□□□□ -0.64
RTN4-211ENST00000438462 TULP2O00295 520 aa11.08□□□□□ -0.64
RTN4-211ENST00000438462 CACNB4O00305 520 aaPredicted RBP11.08□□□□□ -0.64
RTN4-211ENST00000438462 SMAD7O15105 426 aaKnown RBP11.08□□□□□ -0.64
RTN4-211ENST00000438462 PHF1O43189 567 aaPredicted RBP11.08□□□□□ -0.64
RTN4-211ENST00000438462 ZNF821O75541 412 aaPredicted RBP11.08□□□□□ -0.64
RTN4-211ENST00000438462 SEPHS1P49903 392 aa11.08□□□□□ -0.64
RTN4-211ENST00000438462 CLCN6P51797 869 aa11.08□□□□□ -0.64
RTN4-211ENST00000438462 GFERP55789 205 aa11.08□□□□□ -0.64
RTN4-211ENST00000438462 INCA1Q0VD86 236 aa11.08□□□□□ -0.64
RTN4-211ENST00000438462 NCOA4Q13772 614 aa11.08□□□□□ -0.64
RTN4-211ENST00000438462 PSMD6Q15008 389 aa11.08□□□□□ -0.64
RTN4-211ENST00000438462 SNRNP35Q16560 246 aaKnown RBP11.08□□□□□ -0.64
RTN4-211ENST00000438462 C3AR1Q16581 482 aa11.08□□□□□ -0.64
RTN4-211ENST00000438462 TSR1Q2NL82 804 aaKnown RBP11.08□□□□□ -0.64
RTN4-211ENST00000438462 DEFB113Q30KQ7 82 aa11.08□□□□□ -0.64
RTN4-211ENST00000438462 CBARPQ8N350 705 aaPredicted RBP11.08□□□□□ -0.64
RTN4-211ENST00000438462 LARP4BQ92615 738 aaKnown RBP11.08□□□□□ -0.64
RTN4-211ENST00000438462 MAGEB10Q96LZ2 347 aaPredicted RBP11.08□□□□□ -0.64
RTN4-211ENST00000438462 FGFBP2Q9BYJ0 223 aa11.08□□□□□ -0.64
RTN4-211ENST00000438462 MUC3BQ9H195 1237 aa11.08□□□□□ -0.64
RTN4-211ENST00000438462 CARS2Q9HA77 564 aaKnown RBP11.08□□□□□ -0.64
RTN4-211ENST00000438462 NPDC1Q9NQX5 325 aaPredicted RBP11.08□□□□□ -0.64
RTN4-211ENST00000438462 SONP18583 2426 aaKnown RBP11.08□□□□□ -0.64
RTN4-211ENST00000438462 NBEAL2Q6ZNJ1 2754 aa11.08□□□□□ -0.64
RTN4-211ENST00000438462 DRGXA6NNA5 263 aa11.07□□□□□ -0.64
RTN4-211ENST00000438462 H7C1Q1 480 aa11.07□□□□□ -0.64
RTN4-211ENST00000438462 TNFRSF10CO14798 259 aa11.07□□□□□ -0.64
RTN4-211ENST00000438462 EIF3DO15371 548 aaKnown RBP eCLIP11.07□□□□□ -0.64
RTN4-211ENST00000438462 THAP12O43422 761 aa11.07□□□□□ -0.64
RTN4-211ENST00000438462 KLHL41O60662 606 aa11.07□□□□□ -0.64
RTN4-211ENST00000438462 IFNA2P01563 188 aa11.07□□□□□ -0.64
RTN4-211ENST00000438462 ITIH2P19823 946 aa11.07□□□□□ -0.64
RTN4-211ENST00000438462 GJB2P29033 226 aa11.07□□□□□ -0.64
RTN4-211ENST00000438462 GKP32189 559 aa11.07□□□□□ -0.64
RTN4-211ENST00000438462 FASLGP48023 281 aa11.07□□□□□ -0.64
RTN4-211ENST00000438462 IRAK1P51617 712 aa11.07□□□□□ -0.64
RTN4-211ENST00000438462 CYP24A1Q07973 514 aa11.07□□□□□ -0.64
RTN4-211ENST00000438462 MTM1Q13496 603 aa11.07□□□□□ -0.64
RTN4-211ENST00000438462 PDLIM3Q53GG5 364 aaPredicted RBP11.07□□□□□ -0.64
RTN4-211ENST00000438462 TTC39BQ5VTQ0 682 aaPredicted RBP11.07□□□□□ -0.64
RTN4-211ENST00000438462 IZUMO3Q5VZ72 239 aa11.07□□□□□ -0.64
RTN4-211ENST00000438462 DMRTC2Q8IXT2 367 aaPredicted RBP11.07□□□□□ -0.64
RTN4-211ENST00000438462 CLEC1AQ8NC01 280 aa11.07□□□□□ -0.64
RTN4-211ENST00000438462 PLA2G15Q8NCC3 412 aa11.07□□□□□ -0.64
RTN4-211ENST00000438462 COG1Q8WTW3 980 aa11.07□□□□□ -0.64
RTN4-211ENST00000438462 CA5BP1Q8WTZ4 195 aa11.07□□□□□ -0.64
RTN4-211ENST00000438462 MR1Q95460 341 aa11.07□□□□□ -0.64
RTN4-211ENST00000438462 MENTQ9BUN1 341 aa11.07□□□□□ -0.64
RTN4-211ENST00000438462 UBXN6Q9BZV1 441 aa11.07□□□□□ -0.64
RTN4-211ENST00000438462 GPAMQ9HCL2 828 aa11.07□□□□□ -0.64
RTN4-211ENST00000438462 LRFN1Q9P244 771 aa11.07□□□□□ -0.64
RTN4-211ENST00000438462 TCFL5Q9UL49 500 aa11.07□□□□□ -0.64
RTN4-211ENST00000438462 EDARQ9UNE0 448 aa11.07□□□□□ -0.64
RTN4-211ENST00000438462 ST14Q9Y5Y6 855 aa11.07□□□□□ -0.64
RTN4-211ENST00000438462 FHOD1Q9Y613 1164 aa11.07□□□□□ -0.64
RTN4-211ENST00000438462 HRNRQ86YZ3 2850 aaPredicted RBP11.06□□□□□ -0.64
RTN4-211ENST00000438462 CNTRLQ7Z7A1 2325 aa11.06□□□□□ -0.64
RTN4-211ENST00000438462 CCDC78A2IDD5 438 aa11.06□□□□□ -0.64
RTN4-211ENST00000438462 KELP23276 732 aa11.06□□□□□ -0.64
RTN4-211ENST00000438462 PRPHP41219 470 aa11.06□□□□□ -0.64
RTN4-211ENST00000438462 DNA2P51530 1060 aa11.06□□□□□ -0.64
RTN4-211ENST00000438462 PDE1BQ01064 536 aa11.06□□□□□ -0.64
RTN4-211ENST00000438462 PRKD1Q15139 912 aaPredicted RBP11.06□□□□□ -0.64
RTN4-211ENST00000438462 ZNF805Q5CZA5 627 aa11.06□□□□□ -0.64
RTN4-211ENST00000438462 SPOPLQ6IQ16 392 aa11.06□□□□□ -0.64
RTN4-211ENST00000438462 PWWP2BQ6NUJ5 590 aa11.06□□□□□ -0.64
RTN4-211ENST00000438462 CHSY3Q70JA7 882 aa11.06□□□□□ -0.64
RTN4-211ENST00000438462 DNAAF3Q8N9W5 541 aa11.06□□□□□ -0.64
RTN4-211ENST00000438462 ARMC2Q8NEN0 867 aa11.06□□□□□ -0.64
RTN4-211ENST00000438462 OR6K2Q8NGY2 324 aa11.06□□□□□ -0.64
RTN4-211ENST00000438462 SLC37A2Q8TED4 501 aa11.06□□□□□ -0.64
RTN4-211ENST00000438462 TATDN2Q93075 761 aa11.06□□□□□ -0.64
RTN4-211ENST00000438462 SLC39A13Q96H72 371 aa11.06□□□□□ -0.64
RTN4-211ENST00000438462 C2orf49Q9BVC5 232 aaPredicted RBP11.06□□□□□ -0.64
RTN4-211ENST00000438462 PLA2G12AQ9BZM1 189 aa11.06□□□□□ -0.64
RTN4-211ENST00000438462 LRRC4Q9HBW1 653 aa11.06□□□□□ -0.64
RTN4-211ENST00000438462 TLR6Q9Y2C9 796 aa11.06□□□□□ -0.64
RTN4-211ENST00000438462 TRBV23OR9-2A0A075B6M9 112 aa11.05□□□□□ -0.64
RTN4-211ENST00000438462 SLC19A2O60779 497 aa11.05□□□□□ -0.64
RTN4-211ENST00000438462 PFKFB2O60825 505 aa11.05□□□□□ -0.64
RTN4-211ENST00000438462 CUTAO60888 179 aa11.05□□□□□ -0.64
RTN4-211ENST00000438462 VNN1O95497 513 aa11.05□□□□□ -0.64
RTN4-211ENST00000438462 CD19P15391 556 aa11.05□□□□□ -0.64
RTN4-211ENST00000438462 MSX1P28360 303 aa11.05□□□□□ -0.64
RTN4-211ENST00000438462 ARCN1P48444 511 aaKnown RBP11.05□□□□□ -0.64
RTN4-211ENST00000438462 CASP4P49662 377 aa11.05□□□□□ -0.64
RTN4-211ENST00000438462 DAOAP59103 153 aa11.05□□□□□ -0.64
RTN4-211ENST00000438462 RBPJQ06330 500 aa11.05□□□□□ -0.64
RTN4-211ENST00000438462 KRTAP24-1Q3LI83 254 aa11.05□□□□□ -0.64
RTN4-211ENST00000438462 RABGAP1LQ5R372 815 aa11.05□□□□□ -0.64
RTN4-211ENST00000438462 BHLHB9Q6PI77 547 aa11.05□□□□□ -0.64
RTN4-211ENST00000438462 PAMR1Q6UXH9 720 aa11.05□□□□□ -0.64
RTN4-211ENST00000438462 MRGPREQ86SM8 312 aa11.05□□□□□ -0.64
RTN4-211ENST00000438462 SIX6OS1Q8N1H7 587 aa11.05□□□□□ -0.64
RTN4-211ENST00000438462 RAD54LQ92698 747 aa11.05□□□□□ -0.64
RTN4-211ENST00000438462 C9orf72Q96LT7 481 aa11.05□□□□□ -0.64
RTN4-211ENST00000438462 SERPINB11Q96P15 392 aa11.05□□□□□ -0.64
RTN4-211ENST00000438462 TAAR6Q96RI8 345 aa11.05□□□□□ -0.64
RTN4-211ENST00000438462 CHST8Q9H2A9 424 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms