RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 IRGQQ8WZA9 623 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 TMEM125Q96AQ2 219 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 FAM120BQ96EK7 910 aaKnown RBP12.16□□□□□ -0.46
UBE3B-203ENST00000434735 S100A13Q99584 98 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 AIF1LQ9BQI0 150 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 ALG9Q9H6U8 611 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 SIT1Q9Y3P8 196 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 DDX3YO15523 660 aaKnown RBP12.16□□□□□ -0.46
UBE3B-203ENST00000434735 WARSP23381 471 aaKnown RBP12.16□□□□□ -0.46
UBE3B-203ENST00000434735 TBX2Q13207 712 aaPredicted RBP12.16□□□□□ -0.46
UBE3B-203ENST00000434735 NFYCQ13952 458 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 PFKFB4Q16877 469 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 ZNF542PQ5EBM4 170 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 SPANXN3Q5MJ09 141 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 NEK10Q6ZWH5 1172 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 TMPRSS11BQ86T26 416 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 TMPRSS6Q8IU80 811 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 RBM18Q96H35 190 aaKnown RBP12.16□□□□□ -0.46
UBE3B-203ENST00000434735 PTPN18Q99952 460 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 ERP44Q9BS26 406 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 ADAM21Q9UKJ8 722 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 LZTS1Q9Y250 596 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 KLHL20Q9Y2M5 609 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 NTRK1P04629 796 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 CASP9P55211 416 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 TRIP10Q15642 601 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 CARTPTQ16568 116 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 OR4K2Q8NGD2 314 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 SPPL2AQ8TCT8 520 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 KCTD5Q9NXV2 234 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 ATXN2Q99700 1313 aaKnown RBP12.16□□□□□ -0.46
UBE3B-203ENST00000434735 PHGDHO43175 533 aaKnown RBP12.15□□□□□ -0.46
UBE3B-203ENST00000434735 TRAPPC6AO75865 159 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 WFS1O76024 890 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 ERBB2P04626 1255 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 GJA8P48165 433 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 ELOCQ15369 112 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 SIDT2Q8NBJ9 832 aaKnown RBP12.15□□□□□ -0.46
UBE3B-203ENST00000434735 OR4L1Q8NH43 312 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 PHOSPHO2Q8TCD6 241 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 HDAC10Q969S8 669 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 TMEM237Q96Q45 408 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 TRIM8Q9BZR9 551 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 HEBP2Q9Y5Z4 205 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 SDK1Q7Z5N4 2213 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 USP27XA6NNY8 438 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 ADRA1BP35368 520 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 GJA5P36382 358 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 JAG1P78504 1218 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 AGGF1Q8N302 714 aaeCLIP12.15□□□□□ -0.46
UBE3B-203ENST00000434735 OR10Q1Q8NGQ4 319 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 YIPF3Q9GZM5 350 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 BCAS3Q9H6U6 928 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 FANCFQ9NPI8 374 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 EQTNQ9NQ60 294 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 PNO1Q9NRX1 252 aaKnown RBP12.15□□□□□ -0.46
UBE3B-203ENST00000434735 ZDHHC9Q9Y397 364 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 FAM220BPB1ANY3 271 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 B2RBV5 119 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 PEX1O43933 1283 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 CILPO75339 1184 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 GYS2P54840 703 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.15□□□□□ -0.46
UBE3B-203ENST00000434735 RUNX3Q13761 415 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 ARHGAP40Q5TG30 622 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 RHBDF2Q6PJF5 856 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 C19orf60Q96EN9 201 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 HMCESQ96FZ2 354 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 HNRNPABQ99729 332 aaKnown RBP12.15□□□□□ -0.46
UBE3B-203ENST00000434735 ROPN1BQ9BZX4 212 aaPredicted RBP12.15□□□□□ -0.46
UBE3B-203ENST00000434735 KLHL25Q9H0H3 589 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 MANSC1Q9H8J5 431 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 ROPN1Q9HAT0 212 aaPredicted RBP12.15□□□□□ -0.46
UBE3B-203ENST00000434735 PCDH12Q9NPG4 1184 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 ARHGEF3Q9NR81 526 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 PHF24Q9UPV7 400 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 A0A096LPK6 155 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 KAT7O95251 611 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 PIM1P11309 404 aaPredicted RBP12.15□□□□□ -0.46
UBE3B-203ENST00000434735 AMZ2Q86W34 360 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 NKAPQ8N5F7 415 aaKnown RBP12.15□□□□□ -0.46
UBE3B-203ENST00000434735 CDYL2Q8N8U2 506 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 MAGEH1Q9H213 219 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 KCNK4Q9NYG8 393 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 PLAGL2Q9UPG8 496 aa12.15□□□□□ -0.46
UBE3B-203ENST00000434735 A0A0A0MRY4 1105 aa12.14□□□□□ -0.47
UBE3B-203ENST00000434735 A0A1W2PP55 124 aa12.14□□□□□ -0.47
UBE3B-203ENST00000434735 TMEM191CA6NGB0 347 aa12.14□□□□□ -0.47
UBE3B-203ENST00000434735 RGS5O15539 181 aa12.14□□□□□ -0.47
UBE3B-203ENST00000434735 CRABP2P29373 138 aa12.14□□□□□ -0.47
UBE3B-203ENST00000434735 SPIRE1Q08AE8 756 aa12.14□□□□□ -0.47
UBE3B-203ENST00000434735 GDPD4Q6W3E5 623 aa12.14□□□□□ -0.47
UBE3B-203ENST00000434735 LONP2Q86WA8 852 aa12.14□□□□□ -0.47
UBE3B-203ENST00000434735 ERP27Q96DN0 273 aa12.14□□□□□ -0.47
UBE3B-203ENST00000434735 SPATA13Q96N96 652 aa12.14□□□□□ -0.47
UBE3B-203ENST00000434735 NEK6Q9HC98 313 aa12.14□□□□□ -0.47
UBE3B-203ENST00000434735 FMN2Q9NZ56 1722 aa12.14□□□□□ -0.47
UBE3B-203ENST00000434735 MTMR11A4FU01 709 aa12.14□□□□□ -0.47
UBE3B-203ENST00000434735 TMEM150CB9EJG8 249 aa12.14□□□□□ -0.47
UBE3B-203ENST00000434735 WNT9AO14904 365 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms