RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 HERVK_113P63132 956 aa11.82□□□□□ -0.52
CD44-209ENST00000433892 DSC3Q14574 896 aa11.82□□□□□ -0.52
CD44-209ENST00000433892 GEN1Q17RS7 908 aa11.82□□□□□ -0.52
CD44-209ENST00000433892 KIF19Q2TAC6 998 aa11.82□□□□□ -0.52
CD44-209ENST00000433892 UGT3A2Q3SY77 523 aa11.82□□□□□ -0.52
CD44-209ENST00000433892 MTX3Q5HYI7 312 aa11.82□□□□□ -0.52
CD44-209ENST00000433892 C6orf10Q5SRN2 563 aa11.82□□□□□ -0.52
CD44-209ENST00000433892 ARMC3Q5W041 872 aa11.82□□□□□ -0.52
CD44-209ENST00000433892 RAP1GAP2Q684P5 730 aa11.82□□□□□ -0.52
CD44-209ENST00000433892 FBXL22Q6P050 247 aa11.82□□□□□ -0.52
CD44-209ENST00000433892 ZNF280BQ86YH2 543 aa11.82□□□□□ -0.52
CD44-209ENST00000433892 NUP93Q8N1F7 819 aa11.82□□□□□ -0.52
CD44-209ENST00000433892 PTGR2Q8N8N7 351 aaPredicted RBP11.82□□□□□ -0.52
CD44-209ENST00000433892 L3HYPDHQ96EM0 354 aa11.82□□□□□ -0.52
CD44-209ENST00000433892 LRCH3Q96II8 777 aa11.82□□□□□ -0.52
CD44-209ENST00000433892 DNAJC1Q96KC8 554 aaKnown RBP11.82□□□□□ -0.52
CD44-209ENST00000433892 UROC1Q96N76 676 aa11.82□□□□□ -0.52
CD44-209ENST00000433892 ERVK-6Q9BXR3 956 aa11.82□□□□□ -0.52
CD44-209ENST00000433892 MRPS26Q9BYN8 205 aaKnown RBP11.82□□□□□ -0.52
CD44-209ENST00000433892 AKTIPQ9H8T0 292 aa11.82□□□□□ -0.52
CD44-209ENST00000433892 IL1RL2Q9HB29 575 aa11.82□□□□□ -0.52
CD44-209ENST00000433892 FNIP2Q9P278 1114 aa11.82□□□□□ -0.52
CD44-209ENST00000433892 DNAJC15Q9Y5T4 150 aa11.82□□□□□ -0.52
CD44-209ENST00000433892 PATJQ8NI35 1801 aa11.82□□□□□ -0.52
CD44-209ENST00000433892 C9JVG2 144 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 CLGNO14967 610 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 SRP72O76094 671 aaKnown RBP11.81□□□□□ -0.52
CD44-209ENST00000433892 GOT2P00505 430 aaKnown RBP11.81□□□□□ -0.52
CD44-209ENST00000433892 CD1DP15813 335 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 PSMC3P17980 439 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 FOXA1P55317 472 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 STX1BP61266 288 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 TIAL1Q01085 375 aaKnown RBP eCLIP11.81□□□□□ -0.52
CD44-209ENST00000433892 TRAP1Q12931 704 aaKnown RBP11.81□□□□□ -0.52
CD44-209ENST00000433892 POLD3Q15054 466 aaPredicted RBP11.81□□□□□ -0.52
CD44-209ENST00000433892 PFKFB4Q16877 469 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 MYLK3Q32MK0 819 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 SAMD4BQ5PRF9 694 aaKnown RBP11.81□□□□□ -0.52
CD44-209ENST00000433892 FAM45BPQ6NSW5 357 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 GALNT7Q86SF2 657 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 RETREG3Q86VR2 466 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 TEX26Q8N6G2 289 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 FAM45AQ8TCE6 357 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 TOP1MTQ969P6 601 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 CIB1Q99828 191 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 SEMA3CQ99985 751 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 SLC2A11Q9BYW1 496 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 NOL11Q9H8H0 719 aaKnown RBP11.81□□□□□ -0.52
CD44-209ENST00000433892 CNOT11Q9UKZ1 510 aaKnown RBP11.81□□□□□ -0.52
CD44-209ENST00000433892 PCDHB8Q9UN66 801 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 MYO16Q9Y6X6 1858 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 LOC285095A0A1B0GVY8 99 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 TCRBV3S1A0A5B6 114 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 UBXN8O00124 270 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 CD3EAPO15446 510 aaKnown RBP11.81□□□□□ -0.52
CD44-209ENST00000433892 SOAT2O75908 522 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 CDK14O94921 469 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 GLP2RO95838 553 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 NELFEP18615 380 aaKnown RBP11.81□□□□□ -0.52
CD44-209ENST00000433892 GPX3P22352 226 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 SLC7A1P30825 629 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 ACVRL1P37023 503 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 SLC26A3P40879 764 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 IKBKEQ14164 716 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 GALNT3Q14435 633 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 SEMA3AQ14563 771 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 CYTH1Q15438 398 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 OR4D1Q15615 310 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 MSANTD2Q6P1R3 559 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 C8orf82Q6P1X6 216 aaPredicted RBP11.81□□□□□ -0.52
CD44-209ENST00000433892 KLHDC10Q6PID8 442 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 C17orf99Q6UX52 265 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 CLYBLQ8N0X4 340 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 TTC9BQ8N6N2 239 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 OR13C4Q8NGS5 318 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 ZFP28Q8NHY6 868 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 FAM110BQ8TC76 370 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 PPWD1Q96BP3 646 aaKnown RBP11.81□□□□□ -0.52
CD44-209ENST00000433892 MPP4Q96JB8 637 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 ZFRQ96KR1 1074 aaKnown RBP11.81□□□□□ -0.52
CD44-209ENST00000433892 NSUN5Q96P11 429 aaKnown RBP11.81□□□□□ -0.52
CD44-209ENST00000433892 KCNA7Q96RP8 456 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 SLC29A1Q99808 456 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 MID1IP1Q9NPA3 183 aa11.81□□□□□ -0.52
CD44-209ENST00000433892 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.81□□□□□ -0.52
CD44-209ENST00000433892 A0A0J9YYE9 177 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 ARHGEF37A1IGU5 675 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 CCDC162PA2VCL2 907 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 ZNF839A8K0R7 811 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 H3BMM5 538 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 NR5A2O00482 541 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 MUSKO15146 869 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 RAMP2O60895 175 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 TIPRLO75663 272 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 PRSS56P0CW18 603 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 FDXRP22570 491 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 GRIA3P42263 894 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 ACADVLP49748 655 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 NFKB2Q00653 900 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 GRB7Q14451 532 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms