RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 CNR2P34972 360 aa15.35■□□□□ 0.05
CNOT9-205ENST00000433439 TMPRSS15P98073 1019 aa15.35■□□□□ 0.05
CNOT9-205ENST00000433439 HLTFQ14527 1009 aaKnown RBP eCLIP15.35■□□□□ 0.05
CNOT9-205ENST00000433439 PTPRCAPQ14761 206 aa15.35■□□□□ 0.05
CNOT9-205ENST00000433439 ELF2Q15723 593 aa15.35■□□□□ 0.05
CNOT9-205ENST00000433439 BBS9Q3SYG4 887 aa15.35■□□□□ 0.05
CNOT9-205ENST00000433439 NEK5Q6P3R8 708 aa15.35■□□□□ 0.05
CNOT9-205ENST00000433439 CASC4Q6P4E1 433 aa15.35■□□□□ 0.05
CNOT9-205ENST00000433439 Q6ZVL8 140 aa15.35■□□□□ 0.05
CNOT9-205ENST00000433439 ZNF534Q76KX8 674 aa15.35■□□□□ 0.05
CNOT9-205ENST00000433439 C11orf74Q86VG3 221 aa15.35■□□□□ 0.05
CNOT9-205ENST00000433439 CAND1Q86VP6 1230 aaKnown RBP15.35■□□□□ 0.05
CNOT9-205ENST00000433439 HOOK3Q86VS8 718 aa15.35■□□□□ 0.05
CNOT9-205ENST00000433439 SLC41A1Q8IVJ1 513 aa15.35■□□□□ 0.05
CNOT9-205ENST00000433439 RGL4Q8IZJ4 473 aa15.35■□□□□ 0.05
CNOT9-205ENST00000433439 BRSK1Q8TDC3 778 aa15.35■□□□□ 0.05
CNOT9-205ENST00000433439 IFT81Q8WYA0 676 aa15.35■□□□□ 0.05
CNOT9-205ENST00000433439 BIRC7Q96CA5 298 aa15.35■□□□□ 0.05
CNOT9-205ENST00000433439 SERPINB12Q96P63 405 aa15.35■□□□□ 0.05
CNOT9-205ENST00000433439 LYSMD1Q96S90 227 aa15.35■□□□□ 0.05
CNOT9-205ENST00000433439 SRPK1Q96SB4 655 aaKnown RBP15.35■□□□□ 0.05
CNOT9-205ENST00000433439 PRRX2Q99811 253 aa15.35■□□□□ 0.05
CNOT9-205ENST00000433439 SLC17A9Q9BYT1 436 aa15.35■□□□□ 0.05
CNOT9-205ENST00000433439 MIR1-1HGQ9H1L0 117 aa15.35■□□□□ 0.05
CNOT9-205ENST00000433439 XAB2Q9HCS7 855 aaKnown RBP15.35■□□□□ 0.05
CNOT9-205ENST00000433439 FZD3Q9NPG1 666 aa15.35■□□□□ 0.05
CNOT9-205ENST00000433439 SYBUQ9NX95 663 aa15.35■□□□□ 0.05
CNOT9-205ENST00000433439 GRHL1Q9NZI5 618 aa15.35■□□□□ 0.05
CNOT9-205ENST00000433439 BFARQ9NZS9 450 aa15.35■□□□□ 0.05
CNOT9-205ENST00000433439 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.35■□□□□ 0.05
CNOT9-205ENST00000433439 V9GYY5 206 aaPredicted RBP15.35■□□□□ 0.05
CNOT9-205ENST00000433439 ZNF318Q5VUA4 2279 aa15.34■□□□□ 0.05
CNOT9-205ENST00000433439 ABCA7Q8IZY2 2146 aa15.34■□□□□ 0.05
CNOT9-205ENST00000433439 C2orf81A6NN90 581 aa15.34■□□□□ 0.05
CNOT9-205ENST00000433439 METTL12A8MUP2 240 aa15.34■□□□□ 0.05
CNOT9-205ENST00000433439 AP3B1O00203 1094 aa15.34■□□□□ 0.05
CNOT9-205ENST00000433439 STX7O15400 261 aaKnown RBP15.34■□□□□ 0.05
CNOT9-205ENST00000433439 BANF1O75531 89 aa15.34■□□□□ 0.05
CNOT9-205ENST00000433439 CRTAMO95727 393 aa15.34■□□□□ 0.05
CNOT9-205ENST00000433439 IGHV4-34P06331 123 aa15.34■□□□□ 0.05
CNOT9-205ENST00000433439 ETV3P41162 512 aa15.34■□□□□ 0.05
CNOT9-205ENST00000433439 PTGER3P43115 390 aa15.34■□□□□ 0.05
CNOT9-205ENST00000433439 NPY2RP49146 381 aa15.34■□□□□ 0.05
CNOT9-205ENST00000433439 STC1P52823 247 aa15.34■□□□□ 0.05
CNOT9-205ENST00000433439 PTSQ03393 145 aa15.34■□□□□ 0.05
CNOT9-205ENST00000433439 FGL2Q14314 439 aa15.34■□□□□ 0.05
CNOT9-205ENST00000433439 TAF1AQ15573 450 aaPredicted RBP15.34■□□□□ 0.05
CNOT9-205ENST00000433439 CDKN3Q16667 212 aa15.34■□□□□ 0.05
CNOT9-205ENST00000433439 ZNF284Q2VY69 593 aa15.34■□□□□ 0.05
CNOT9-205ENST00000433439 PLK5Q496M5 336 aa15.34■□□□□ 0.05
CNOT9-205ENST00000433439 TMEM259Q4ZIN3 620 aa15.34■□□□□ 0.05
CNOT9-205ENST00000433439 SETMARQ53H47 684 aaPredicted RBP15.34■□□□□ 0.05
CNOT9-205ENST00000433439 HP1BP3Q5SSJ5 553 aaPredicted RBP15.34■□□□□ 0.05
CNOT9-205ENST00000433439 ALS2CLQ60I27 953 aa15.34■□□□□ 0.05
CNOT9-205ENST00000433439 ZC3H14Q6PJT7 736 aaKnown RBP15.34■□□□□ 0.05
CNOT9-205ENST00000433439 TMC3Q7Z5M5 1100 aa15.34■□□□□ 0.05
CNOT9-205ENST00000433439 TRIM69Q86WT6 500 aa15.34■□□□□ 0.05
CNOT9-205ENST00000433439 TTC30BQ8N4P2 665 aa15.34■□□□□ 0.05
CNOT9-205ENST00000433439 PPHLN1Q8NEY8 458 aaKnown RBP15.34■□□□□ 0.05
CNOT9-205ENST00000433439 CADM4Q8NFZ8 388 aa15.34■□□□□ 0.05
CNOT9-205ENST00000433439 EPC1Q9H2F5 836 aa15.34■□□□□ 0.05
CNOT9-205ENST00000433439 TRABDQ9H4I3 376 aa15.34■□□□□ 0.05
CNOT9-205ENST00000433439 FAM114A2Q9NRY5 505 aa15.34■□□□□ 0.05
CNOT9-205ENST00000433439 PKD2L2Q9NZM6 624 aa15.34■□□□□ 0.05
CNOT9-205ENST00000433439 EIF2B4Q9UI10 523 aaKnown RBP15.34■□□□□ 0.05
CNOT9-205ENST00000433439 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.34■□□□□ 0.05
CNOT9-205ENST00000433439 PKP3Q9Y446 797 aa15.34■□□□□ 0.05
CNOT9-205ENST00000433439 MAD1L1Q9Y6D9 718 aa15.34■□□□□ 0.05
CNOT9-205ENST00000433439 MYLKQ15746 1914 aa15.34■□□□□ 0.05
CNOT9-205ENST00000433439 THADAQ6YHU6 1953 aa15.34■□□□□ 0.05
CNOT9-205ENST00000433439 TRPM6Q9BX84 2022 aa15.34■□□□□ 0.05
CNOT9-205ENST00000433439 PLXND1Q9Y4D7 1925 aa15.33■□□□□ 0.05
CNOT9-205ENST00000433439 LRRK1Q38SD2 2015 aa15.33■□□□□ 0.04
CNOT9-205ENST00000433439 DOCK9Q9BZ29 2069 aa15.33■□□□□ 0.04
CNOT9-205ENST00000433439 CCL22O00626 93 aa15.33■□□□□ 0.04
CNOT9-205ENST00000433439 WNT9AO14904 365 aa15.33■□□□□ 0.04
CNOT9-205ENST00000433439 RHOBTB1O94844 696 aa15.33■□□□□ 0.04
CNOT9-205ENST00000433439 PCCBP05166 539 aa15.33■□□□□ 0.04
CNOT9-205ENST00000433439 LPOP22079 712 aaPredicted RBP15.33■□□□□ 0.04
CNOT9-205ENST00000433439 CCR5P51681 352 aa15.33■□□□□ 0.04
CNOT9-205ENST00000433439 ARL4CP56559 192 aa15.33■□□□□ 0.04
CNOT9-205ENST00000433439 TCF15Q12870 199 aa15.33■□□□□ 0.04
CNOT9-205ENST00000433439 MSLNQ13421 630 aaPredicted RBP15.33■□□□□ 0.04
CNOT9-205ENST00000433439 FNBP1LQ5T0N5 605 aa15.33■□□□□ 0.04
CNOT9-205ENST00000433439 PMS2CLQ68D20 193 aa15.33■□□□□ 0.04
CNOT9-205ENST00000433439 MPP5Q8N3R9 675 aa15.33■□□□□ 0.04
CNOT9-205ENST00000433439 ATOH1Q92858 354 aaPredicted RBP15.33■□□□□ 0.04
CNOT9-205ENST00000433439 FOXJ1Q92949 421 aa15.33■□□□□ 0.04
CNOT9-205ENST00000433439 EID2BQ96D98 161 aa15.33■□□□□ 0.04
CNOT9-205ENST00000433439 NUS1Q96E22 293 aa15.33■□□□□ 0.04
CNOT9-205ENST00000433439 PHOX2BQ99453 314 aa15.33■□□□□ 0.04
CNOT9-205ENST00000433439 DUSP15Q9H1R2 295 aaPredicted RBP15.33■□□□□ 0.04
CNOT9-205ENST00000433439 FAM86C1Q9NVL1 165 aa15.33■□□□□ 0.04
CNOT9-205ENST00000433439 SAMD15Q9P1V8 674 aa15.33■□□□□ 0.04
CNOT9-205ENST00000433439 CA5BQ9Y2D0 317 aa15.33■□□□□ 0.04
CNOT9-205ENST00000433439 ATXN2Q99700 1313 aaKnown RBP15.33■□□□□ 0.04
CNOT9-205ENST00000433439 CEP192Q8TEP8 1941 aa15.33■□□□□ 0.04
CNOT9-205ENST00000433439 HEATR9A2RTY3 570 aa15.32■□□□□ 0.04
CNOT9-205ENST00000433439 SDR42E2A6NKP2 422 aa15.32■□□□□ 0.04
CNOT9-205ENST00000433439 SMAPO00193 183 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms