RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 ING3Q9NXR8 418 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 CCDC59Q9P031 241 aaKnown RBP5.38□□□□□ -1.55
PTPN4-203ENST00000430976 PDP1Q9P0J1 537 aaPredicted RBP5.38□□□□□ -1.55
PTPN4-203ENST00000430976 NYAP2Q9P242 653 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 DIMT1Q9UNQ2 313 aaKnown RBP5.38□□□□□ -1.55
PTPN4-203ENST00000430976 STARD10Q9Y365 291 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 TNPO3Q9Y5L0 923 aaKnown RBP5.38□□□□□ -1.55
PTPN4-203ENST00000430976 RFX7Q2KHR2 1363 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 CCDC182A6NF36 153 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 H7BY64 318 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 ABCD4O14678 606 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 SHOX2O60902 331 aaPredicted RBP5.37□□□□□ -1.55
PTPN4-203ENST00000430976 CCNB2O95067 398 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 ALDH2P05091 517 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 MAOBP27338 520 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 TRHRP34981 398 aaPredicted RBP5.37□□□□□ -1.55
PTPN4-203ENST00000430976 IRS1P35568 1242 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 ARCN1P48444 511 aaKnown RBP5.37□□□□□ -1.55
PTPN4-203ENST00000430976 RAB15P59190 212 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 SPCS3P61009 180 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 YWHAZP63104 245 aaKnown RBP5.37□□□□□ -1.55
PTPN4-203ENST00000430976 RAD51Q06609 339 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 NPRL3Q12980 569 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 ARL6IP1Q15041 203 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 RTN1Q16799 776 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 LEXMQ3ZCV2 418 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 NHSL2Q5HYW2 709 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 CYP4A22Q5TCH4 519 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 BTBD8Q5XKL5 378 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 MPRIPQ6WCQ1 1025 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 NLRP8Q86W28 1048 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 FAM185AQ8N0U4 392 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 OR2C3Q8N628 320 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 RNF148Q8N7C7 305 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 TERB1Q8NA31 727 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 BHLHE22Q8NFJ8 381 aaPredicted RBP5.37□□□□□ -1.55
PTPN4-203ENST00000430976 SETD6Q8TBK2 473 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 PLEKHO2Q8TD55 490 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 DNAJA4Q8WW22 397 aaPredicted RBP5.37□□□□□ -1.55
PTPN4-203ENST00000430976 RANBP9Q96S59 729 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 HTATIP2Q9BUP3 242 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 KIFC1Q9BW19 673 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 HOXD1Q9GZZ0 328 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 EPB41L1Q9H4G0 881 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 UCK1Q9HA47 277 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 RAVER2Q9HCJ3 691 aaKnown RBP5.37□□□□□ -1.55
PTPN4-203ENST00000430976 NMRK2Q9NPI5 230 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 ADAM28Q9UKQ2 775 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 PCDHA12Q9UN75 941 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 PITPNM2Q9BZ72 1349 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 PASKQ96RG2 1323 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 CCT8L1PA6NM43 557 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 MARCH11A6NNE9 402 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 CENPXA8MT69 81 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 POTECB2RU33 542 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 ARVCFO00192 962 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 GRM8O00222 908 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 FOXE1O00358 373 aaPredicted RBP5.37□□□□□ -1.55
PTPN4-203ENST00000430976 RBBP9O75884 186 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 GJB6O95452 261 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 PLATP00750 562 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 FGGP02679 453 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 CDK1P06493 297 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 ARP10275 920 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 PTPN2P17706 415 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 HNRNPA2B1P22626 353 aaKnown RBP5.37□□□□□ -1.55
PTPN4-203ENST00000430976 TYK2P29597 1187 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 BDKRB2P30411 391 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 PKLRP30613 574 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 HTR7P34969 479 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 VHLP40337 213 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 GPR15P49685 360 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 PRKCQQ04759 706 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 FOXM1Q08050 763 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 PPP1R3AQ16821 1122 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 HFEQ30201 348 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 UBXN11Q5T124 520 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 GSTA5Q7RTV2 222 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 ARMC10Q8N2F6 343 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 ZNF557Q8N988 423 aaPredicted RBP5.37□□□□□ -1.55
PTPN4-203ENST00000430976 U2AF1L4Q8WU68 220 aaKnown RBP5.37□□□□□ -1.55
PTPN4-203ENST00000430976 TIMM29Q9BSF4 260 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 PDCD10Q9BUL8 212 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 TPPP3Q9BW30 176 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 TTYH3Q9C0H2 523 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 SPON1Q9HCB6 807 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 ACTR10Q9NZ32 417 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 KCND2Q9NZV8 630 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 HSFX1Q9UBD0 423 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 ARPP21Q9UBL0 812 aaPredicted RBP5.37□□□□□ -1.55
PTPN4-203ENST00000430976 TRPC4Q9UBN4 977 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 TINAGQ9UJW2 476 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.37□□□□□ -1.55
PTPN4-203ENST00000430976 KLRG2A4D1S0 409 aaPredicted RBP5.37□□□□□ -1.55
PTPN4-203ENST00000430976 CASC3O15234 703 aaKnown RBP5.37□□□□□ -1.55
PTPN4-203ENST00000430976 ENSAO43768 121 aaKnown RBP5.37□□□□□ -1.55
PTPN4-203ENST00000430976 PFKFB2O60825 505 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 GATBO75879 557 aaKnown RBP5.37□□□□□ -1.55
PTPN4-203ENST00000430976 DGAT1O75907 488 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 NADKO95544 446 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms