RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 SALL4Q9UJQ4 1053 aa12.53□□□□□ -0.4
SMPD4-204ENST00000430682 PHTF1Q9UMS5 762 aa12.53□□□□□ -0.4
SMPD4-204ENST00000430682 CLCA2Q9UQC9 943 aa12.53□□□□□ -0.4
SMPD4-204ENST00000430682 CHKBQ9Y259 395 aa12.53□□□□□ -0.4
SMPD4-204ENST00000430682 GPSM3Q9Y4H4 160 aa12.53□□□□□ -0.4
SMPD4-204ENST00000430682 ST14Q9Y5Y6 855 aa12.53□□□□□ -0.4
SMPD4-204ENST00000430682 PMS2P1A4D2B8 440 aa12.52□□□□□ -0.41
SMPD4-204ENST00000430682 EME2A4GXA9 379 aaPredicted RBP12.52□□□□□ -0.41
SMPD4-204ENST00000430682 RCCD1A6NED2 376 aa12.52□□□□□ -0.41
SMPD4-204ENST00000430682 KCNK1O00180 336 aa12.52□□□□□ -0.41
SMPD4-204ENST00000430682 SOD1P00441 154 aa12.52□□□□□ -0.41
SMPD4-204ENST00000430682 JCHAINP01591 159 aa12.52□□□□□ -0.41
SMPD4-204ENST00000430682 TNNT1P13805 278 aa12.52□□□□□ -0.41
SMPD4-204ENST00000430682 COMTP21964 271 aa12.52□□□□□ -0.41
SMPD4-204ENST00000430682 ARHGAP25P42331 645 aa12.52□□□□□ -0.41
SMPD4-204ENST00000430682 POLD2P49005 469 aa12.52□□□□□ -0.41
SMPD4-204ENST00000430682 MARCKSL1P49006 195 aa12.52□□□□□ -0.41
SMPD4-204ENST00000430682 KIAA1024LP59773 190 aa12.52□□□□□ -0.41
SMPD4-204ENST00000430682 E2F1Q01094 437 aa12.52□□□□□ -0.41
SMPD4-204ENST00000430682 RTP5Q14D33 572 aa12.52□□□□□ -0.41
SMPD4-204ENST00000430682 TSR1Q2NL82 804 aaKnown RBP12.52□□□□□ -0.41
SMPD4-204ENST00000430682 RALGPS1Q5JS13 557 aa12.52□□□□□ -0.41
SMPD4-204ENST00000430682 ARMC12Q5T9G4 340 aa12.52□□□□□ -0.41
SMPD4-204ENST00000430682 SLC9A4Q6AI14 798 aa12.52□□□□□ -0.41
SMPD4-204ENST00000430682 MFSD7Q6UXD7 560 aa12.52□□□□□ -0.41
SMPD4-204ENST00000430682 CNGA4Q8IV77 575 aa12.52□□□□□ -0.41
SMPD4-204ENST00000430682 MAP7D3Q8IWC1 876 aa12.52□□□□□ -0.41
SMPD4-204ENST00000430682 CACTIN-AS1Q8N1I8 211 aa12.52□□□□□ -0.41
SMPD4-204ENST00000430682 KYQ8NBH2 561 aa12.52□□□□□ -0.41
SMPD4-204ENST00000430682 NSMCE1Q8WV22 266 aa12.52□□□□□ -0.41
SMPD4-204ENST00000430682 RNF25Q96BH1 459 aaPredicted RBP12.52□□□□□ -0.41
SMPD4-204ENST00000430682 HDAC11Q96DB2 347 aa12.52□□□□□ -0.41
SMPD4-204ENST00000430682 NUS1Q96E22 293 aa12.52□□□□□ -0.41
SMPD4-204ENST00000430682 DTD2Q96FN9 168 aa12.52□□□□□ -0.41
SMPD4-204ENST00000430682 TBATAQ96M53 351 aa12.52□□□□□ -0.41
SMPD4-204ENST00000430682 AGAP2Q99490 1192 aa12.52□□□□□ -0.41
SMPD4-204ENST00000430682 POLR1EQ9GZS1 481 aaKnown RBP12.52□□□□□ -0.41
SMPD4-204ENST00000430682 TMEM168Q9H0V1 697 aa12.52□□□□□ -0.41
SMPD4-204ENST00000430682 SIRPGQ9P1W8 387 aa12.52□□□□□ -0.41
SMPD4-204ENST00000430682 SAE1Q9UBE0 346 aaPredicted RBP12.52□□□□□ -0.41
SMPD4-204ENST00000430682 KLQ9UEF7 1012 aa12.52□□□□□ -0.41
SMPD4-204ENST00000430682 CD84Q9UIB8 345 aa12.52□□□□□ -0.41
SMPD4-204ENST00000430682 HEY1Q9Y5J3 304 aa12.52□□□□□ -0.41
SMPD4-204ENST00000430682 A0A0J9YYE9 177 aa12.51□□□□□ -0.41
SMPD4-204ENST00000430682 RASGRP1O95267 797 aa12.51□□□□□ -0.41
SMPD4-204ENST00000430682 LCA5LO95447 670 aa12.51□□□□□ -0.41
SMPD4-204ENST00000430682 TRBC1P01850 177 aa12.51□□□□□ -0.41
SMPD4-204ENST00000430682 GP1BAP07359 652 aa12.51□□□□□ -0.41
SMPD4-204ENST00000430682 ANXA6P08133 673 aa12.51□□□□□ -0.41
SMPD4-204ENST00000430682 HOXC4P09017 264 aaPredicted RBP12.51□□□□□ -0.41
SMPD4-204ENST00000430682 TPM1P09493 284 aa12.51□□□□□ -0.41
SMPD4-204ENST00000430682 MAGEA1P43355 309 aa12.51□□□□□ -0.41
SMPD4-204ENST00000430682 NOP2P46087 812 aaKnown RBP12.51□□□□□ -0.41
SMPD4-204ENST00000430682 ZNF75DP51815 510 aa12.51□□□□□ -0.41
SMPD4-204ENST00000430682 PTSQ03393 145 aa12.51□□□□□ -0.41
SMPD4-204ENST00000430682 PPIDQ08752 370 aaKnown RBP12.51□□□□□ -0.41
SMPD4-204ENST00000430682 NR0B2Q15466 257 aa12.51□□□□□ -0.41
SMPD4-204ENST00000430682 TAZQ16635 292 aa12.51□□□□□ -0.41
SMPD4-204ENST00000430682 HS1BP3Q53T59 392 aa12.51□□□□□ -0.41
SMPD4-204ENST00000430682 ZFYVE27Q5T4F4 411 aa12.51□□□□□ -0.41
SMPD4-204ENST00000430682 LRRC66Q68CR7 880 aa12.51□□□□□ -0.41
SMPD4-204ENST00000430682 NRROSQ86YC3 692 aa12.51□□□□□ -0.41
SMPD4-204ENST00000430682 RHOT2Q8IXI1 618 aa12.51□□□□□ -0.41
SMPD4-204ENST00000430682 CCDC13Q8IYE1 715 aa12.51□□□□□ -0.41
SMPD4-204ENST00000430682 BBS5Q8N3I7 341 aa12.51□□□□□ -0.41
SMPD4-204ENST00000430682 CCNYQ8ND76 341 aa12.51□□□□□ -0.41
SMPD4-204ENST00000430682 OR56A4Q8NGH8 313 aa12.51□□□□□ -0.41
SMPD4-204ENST00000430682 TPCN2Q8NHX9 752 aa12.51□□□□□ -0.41
SMPD4-204ENST00000430682 SCAMP4Q969E2 229 aa12.51□□□□□ -0.41
SMPD4-204ENST00000430682 OLFM3Q96PB7 478 aa12.51□□□□□ -0.41
SMPD4-204ENST00000430682 WDR24Q96S15 920 aa12.51□□□□□ -0.41
SMPD4-204ENST00000430682 RBM15Q96T37 977 aaKnown RBP eCLIP12.51□□□□□ -0.41
SMPD4-204ENST00000430682 TDRD1Q9BXT4 1180 aaKnown RBP12.51□□□□□ -0.41
SMPD4-204ENST00000430682 TEX101Q9BY14 249 aa12.51□□□□□ -0.41
SMPD4-204ENST00000430682 BRD8Q9H0E9 1235 aa12.51□□□□□ -0.41
SMPD4-204ENST00000430682 ABCG8Q9H221 673 aa12.51□□□□□ -0.41
SMPD4-204ENST00000430682 GULP1Q9UBP9 304 aa12.51□□□□□ -0.41
SMPD4-204ENST00000430682 INTUQ9ULD6 942 aa12.51□□□□□ -0.41
SMPD4-204ENST00000430682 TTLL3Q9Y4R7 772 aa12.51□□□□□ -0.41
SMPD4-204ENST00000430682 DGKBQ9Y6T7 804 aa12.51□□□□□ -0.41
SMPD4-204ENST00000430682 CFAP46Q8IYW2 2715 aa12.5□□□□□ -0.41
SMPD4-204ENST00000430682 A0A1W2PQ67 120 aa12.5□□□□□ -0.41
SMPD4-204ENST00000430682 ZNF487B1APH4 448 aa12.5□□□□□ -0.41
SMPD4-204ENST00000430682 BRINP1O60477 761 aa12.5□□□□□ -0.41
SMPD4-204ENST00000430682 CSO75390 466 aaKnown RBP12.5□□□□□ -0.41
SMPD4-204ENST00000430682 TNFP01375 233 aa12.5□□□□□ -0.41
SMPD4-204ENST00000430682 KRT1P04264 644 aa12.5□□□□□ -0.41
SMPD4-204ENST00000430682 CEACAM5P06731 702 aa12.5□□□□□ -0.41
SMPD4-204ENST00000430682 KRT10P13645 584 aa12.5□□□□□ -0.41
SMPD4-204ENST00000430682 CTSEP14091 401 aa12.5□□□□□ -0.41
SMPD4-204ENST00000430682 PECAM1P16284 738 aaPredicted RBP12.5□□□□□ -0.41
SMPD4-204ENST00000430682 HTR1BP28222 390 aa12.5□□□□□ -0.41
SMPD4-204ENST00000430682 CD86P42081 329 aa12.5□□□□□ -0.41
SMPD4-204ENST00000430682 CDKN2BP42772 138 aa12.5□□□□□ -0.41
SMPD4-204ENST00000430682 DUSP3P51452 185 aaPredicted RBP12.5□□□□□ -0.41
SMPD4-204ENST00000430682 PDX1P52945 283 aa12.5□□□□□ -0.41
SMPD4-204ENST00000430682 HADHBP55084 474 aaKnown RBP12.5□□□□□ -0.41
SMPD4-204ENST00000430682 DYNLT1P63172 113 aa12.5□□□□□ -0.41
SMPD4-204ENST00000430682 IFI35P80217 286 aaPredicted RBP12.5□□□□□ -0.41
SMPD4-204ENST00000430682 SKOR1P84550 965 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms