RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 TRIM73Q86UV7 250 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 GHDCQ8N2G8 530 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 TMEM199Q8N511 208 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 AVL9Q8NBF6 648 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 OR6J1Q8NGC5 347 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 GOT1L1Q8NHS2 421 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 BICD2Q8TD16 824 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 HDAC7Q8WUI4 952 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 JAKMIP2Q96AA8 810 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 TEFMQ96QE5 360 aaKnown RBP3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 PAFAH2Q99487 392 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 HIPK3Q9H422 1215 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 OPA3Q9H6K4 179 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 GRPEL1Q9HAV7 217 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 ZNF304Q9HCX3 659 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 SLC6A13Q9NSD5 602 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 SETD4Q9NVD3 440 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 PLK2Q9NYY3 685 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 NCKIPSDQ9NZQ3 722 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 FBXO40Q9UH90 709 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 ICKQ9UPZ9 632 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 DHDHQ9UQ10 334 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 TRPV2Q9Y5S1 764 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 A0A1W2PR77 199 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 FAM170AA1A519 330 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 OR6C68A6NDL8 312 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 GLOD5A6NK44 160 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 NPIPB11E5RHQ5 1161 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 RNMTO43148 476 aaKnown RBP3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 DIAPH2O60879 1101 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 TMCC1O94876 653 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 DDAH2O95865 285 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 MYZAPP0CAP1 466 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 FCGR2AP12318 317 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 KRT10P13645 584 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 ZNF8P17098 575 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 CDH2P19022 906 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 ITGAXP20702 1163 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 CDC25AP30304 524 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 HOXC13P31276 330 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 TLX1P31314 330 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 THPOP40225 353 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 ARL1P40616 181 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 SKIV2L2P42285 1042 aaKnown RBP3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 CLCNKBP51801 687 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 MRPL12P52815 198 aaKnown RBP3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 PGGT1BP53609 377 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 HDAC4P56524 1084 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 PPATQ06203 517 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 NIPAL4Q0D2K0 466 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 GRIK3Q13003 919 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 CRYMQ14894 314 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 DPCR1Q3MIW9 517 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 ZNF628Q5EBL2 1059 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 SERTAD4-AS1Q5TG53 156 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 ASPHD1Q5U4P2 390 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 TMEM268Q5VZI3 342 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 PLBD1Q6P4A8 553 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 TRAT1Q6PIZ9 186 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 SUSD1Q6UWL2 747 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 C9orf47Q6ZRZ4 202 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 CCDC105Q8IYK2 499 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 NAT8LQ8N9F0 302 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 TDRD5Q8NAT2 981 aaKnown RBP3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 HJURPQ8NCD3 748 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 DNAAF1Q8NEP3 725 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 GDPD5Q8WTR4 605 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 FAR1Q8WVX9 515 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 FAM149B1Q96BN6 582 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 ZNF333Q96JL9 665 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 NAP1L5Q96NT1 182 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 FIZ1Q96SL8 496 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 MAP7D2Q96T17 732 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 EDEM3Q9BZQ6 932 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 B3GNT4Q9C0J1 378 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 SH2D4AQ9H788 454 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 MAP6D1Q9H9H5 199 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 KIF9Q9HAQ2 790 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 RRP7BPQ9NSQ0 103 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 TAB2Q9NYJ8 693 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 MORF4L1Q9UBU8 362 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 A4GNTQ9UNA3 340 aa3.05□□□□□ -1.92
HMGB1P9-201ENST00000429856 FLT1P17948 1338 aa3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 C17orf102A2RUQ5 167 aa3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 CDRT15L2A8MXV6 281 aa3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 SPRY1O43609 319 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 SLC25A17O43808 307 aa3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 TPPPO94811 219 aa3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 SLCO2B1O94956 709 aa3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 NKX2-2O95096 273 aa3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 CSPG5O95196 566 aa3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 SERPINC1P01008 464 aa3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 MMP3P08254 477 aa3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 CPT2P23786 658 aa3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 POU1F1P28069 291 aa3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 GNAQP50148 359 aa3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 ZNF41P51814 821 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 ARSFP54793 590 aa3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 MFAP4P55083 255 aa3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 P2RX3P56373 397 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms