RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 ALDH7A1P49419 539 aaKnown RBP13.7□□□□□ -0.22
THBS3-202ENST00000428962 XIAPP98170 497 aa13.7□□□□□ -0.22
THBS3-202ENST00000428962 MLLT1Q03111 559 aaPredicted RBP13.7□□□□□ -0.22
THBS3-202ENST00000428962 PDAP1Q13442 181 aaKnown RBP13.7□□□□□ -0.22
THBS3-202ENST00000428962 TAF1AQ15573 450 aaPredicted RBP13.7□□□□□ -0.22
THBS3-202ENST00000428962 TCHHL1Q5QJ38 904 aaPredicted RBP13.7□□□□□ -0.22
THBS3-202ENST00000428962 TMEM198Q66K66 360 aa13.7□□□□□ -0.22
THBS3-202ENST00000428962 IZUMO2Q6UXV1 221 aa13.7□□□□□ -0.22
THBS3-202ENST00000428962 TMEM173Q86WV6 379 aaPredicted RBP13.7□□□□□ -0.22
THBS3-202ENST00000428962 BCL7CQ8WUZ0 217 aaPredicted RBP13.7□□□□□ -0.22
THBS3-202ENST00000428962 PYDC1Q8WXC3 89 aa13.7□□□□□ -0.22
THBS3-202ENST00000428962 MIEF2Q96C03 454 aa13.7□□□□□ -0.22
THBS3-202ENST00000428962 PHF21BQ96EK2 531 aa13.7□□□□□ -0.22
THBS3-202ENST00000428962 ECSITQ9BQ95 431 aa13.7□□□□□ -0.22
THBS3-202ENST00000428962 GSTO2Q9H4Y5 243 aa13.7□□□□□ -0.22
THBS3-202ENST00000428962 CWH43Q9H720 699 aa13.7□□□□□ -0.22
THBS3-202ENST00000428962 SCUBE2Q9NQ36 999 aa13.7□□□□□ -0.22
THBS3-202ENST00000428962 TRPM5Q9NZQ8 1165 aa13.7□□□□□ -0.22
THBS3-202ENST00000428962 AFF4Q9UHB7 1163 aaKnown RBP13.7□□□□□ -0.22
THBS3-202ENST00000428962 VPS9D1Q9Y2B5 631 aa13.7□□□□□ -0.22
THBS3-202ENST00000428962 H3BNC9 293 aa13.69□□□□□ -0.22
THBS3-202ENST00000428962 PFDN6O15212 129 aa13.69□□□□□ -0.22
THBS3-202ENST00000428962 COCHO43405 550 aa13.69□□□□□ -0.22
THBS3-202ENST00000428962 GJB3O75712 270 aa13.69□□□□□ -0.22
THBS3-202ENST00000428962 PARNO95453 639 aaKnown RBP13.69□□□□□ -0.22
THBS3-202ENST00000428962 CD1DP15813 335 aa13.69□□□□□ -0.22
THBS3-202ENST00000428962 ZNF37AP17032 561 aaPredicted RBP13.69□□□□□ -0.22
THBS3-202ENST00000428962 KCNA5P22460 613 aa13.69□□□□□ -0.22
THBS3-202ENST00000428962 CORO1AP31146 461 aaKnown RBP13.69□□□□□ -0.22
THBS3-202ENST00000428962 OR1D2P34982 312 aa13.69□□□□□ -0.22
THBS3-202ENST00000428962 ERFP50548 548 aa13.69□□□□□ -0.22
THBS3-202ENST00000428962 ZNF140P52738 457 aaPredicted RBP13.69□□□□□ -0.22
THBS3-202ENST00000428962 PLK1P53350 603 aa13.69□□□□□ -0.22
THBS3-202ENST00000428962 HERVK_113P63132 956 aa13.69□□□□□ -0.22
THBS3-202ENST00000428962 ZNF678Q5SXM1 525 aa13.69□□□□□ -0.22
THBS3-202ENST00000428962 CHSY3Q70JA7 882 aa13.69□□□□□ -0.22
THBS3-202ENST00000428962 ISCA2Q86U28 154 aa13.69□□□□□ -0.22
THBS3-202ENST00000428962 PIM3Q86V86 326 aa13.69□□□□□ -0.22
THBS3-202ENST00000428962 DENND1CQ8IV53 801 aa13.69□□□□□ -0.22
THBS3-202ENST00000428962 OR13C4Q8NGS5 318 aa13.69□□□□□ -0.22
THBS3-202ENST00000428962 RHEBL1Q8TAI7 183 aa13.69□□□□□ -0.22
THBS3-202ENST00000428962 PRICKLE1Q96MT3 831 aaPredicted RBP13.69□□□□□ -0.22
THBS3-202ENST00000428962 TCF12Q99081 682 aa13.69□□□□□ -0.22
THBS3-202ENST00000428962 AARSD1Q9BTE6 412 aaKnown RBP13.69□□□□□ -0.22
THBS3-202ENST00000428962 ERVK-6Q9BXR3 956 aa13.69□□□□□ -0.22
THBS3-202ENST00000428962 CCDC68Q9H2F9 335 aa13.69□□□□□ -0.22
THBS3-202ENST00000428962 SUDS3Q9H7L9 328 aaPredicted RBP13.69□□□□□ -0.22
THBS3-202ENST00000428962 WDR41Q9HAD4 459 aa13.69□□□□□ -0.22
THBS3-202ENST00000428962 SYTL2Q9HCH5 934 aa13.69□□□□□ -0.22
THBS3-202ENST00000428962 MRPL40Q9NQ50 206 aaKnown RBP13.69□□□□□ -0.22
THBS3-202ENST00000428962 TANC1Q9C0D5 1861 aa13.69□□□□□ -0.22
THBS3-202ENST00000428962 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.69□□□□□ -0.22
THBS3-202ENST00000428962 C2orf81A6NN90 581 aa13.69□□□□□ -0.22
THBS3-202ENST00000428962 UBDO15205 165 aa13.69□□□□□ -0.22
THBS3-202ENST00000428962 SUPT7LO94864 414 aa13.69□□□□□ -0.22
THBS3-202ENST00000428962 STX5Q13190 355 aa13.69□□□□□ -0.22
THBS3-202ENST00000428962 TAF12Q16514 161 aa13.69□□□□□ -0.22
THBS3-202ENST00000428962 KIAA1841Q6NSI8 718 aa13.69□□□□□ -0.22
THBS3-202ENST00000428962 ZFP1Q6P2D0 407 aa13.69□□□□□ -0.22
THBS3-202ENST00000428962 ZNF549Q6P9A3 640 aa13.69□□□□□ -0.22
THBS3-202ENST00000428962 TMEM207Q6UWW9 146 aa13.69□□□□□ -0.22
THBS3-202ENST00000428962 ZNF783Q6ZMS7 281 aa13.69□□□□□ -0.22
THBS3-202ENST00000428962 GLT6D1Q7Z4J2 308 aa13.69□□□□□ -0.22
THBS3-202ENST00000428962 MFN1Q8IWA4 741 aa13.69□□□□□ -0.22
THBS3-202ENST00000428962 RMDN1Q96DB5 314 aa13.69□□□□□ -0.22
THBS3-202ENST00000428962 CDKN2AIPNLQ96HQ2 116 aa13.69□□□□□ -0.22
THBS3-202ENST00000428962 MARK4Q96L34 752 aa13.69□□□□□ -0.22
THBS3-202ENST00000428962 MRPL1Q9BYD6 325 aaKnown RBP13.69□□□□□ -0.22
THBS3-202ENST00000428962 TFB2MQ9H5Q4 396 aaKnown RBP13.69□□□□□ -0.22
THBS3-202ENST00000428962 UTP6Q9NYH9 597 aaKnown RBP13.69□□□□□ -0.22
THBS3-202ENST00000428962 AGO1Q9UL18 857 aaKnown RBP13.69□□□□□ -0.22
THBS3-202ENST00000428962 FIS1Q9Y3D6 152 aa13.69□□□□□ -0.22
THBS3-202ENST00000428962 TRAF6Q9Y4K3 522 aa13.69□□□□□ -0.22
THBS3-202ENST00000428962 ANKRD36A6QL64 1941 aa13.68□□□□□ -0.22
THBS3-202ENST00000428962 ADAM12O43184 909 aa13.68□□□□□ -0.22
THBS3-202ENST00000428962 GPC4O75487 556 aa13.68□□□□□ -0.22
THBS3-202ENST00000428962 STC2O76061 302 aa13.68□□□□□ -0.22
THBS3-202ENST00000428962 GJB5O95377 273 aa13.68□□□□□ -0.22
THBS3-202ENST00000428962 ENO3P13929 434 aaPredicted RBP13.68□□□□□ -0.22
THBS3-202ENST00000428962 PPP3CCP48454 512 aa13.68□□□□□ -0.22
THBS3-202ENST00000428962 ATP4BP51164 291 aa13.68□□□□□ -0.22
THBS3-202ENST00000428962 SCNN1BP51168 640 aa13.68□□□□□ -0.22
THBS3-202ENST00000428962 NAA20P61599 178 aa13.68□□□□□ -0.22
THBS3-202ENST00000428962 RPS24P62847 133 aaKnown RBP13.68□□□□□ -0.22
THBS3-202ENST00000428962 CDC16Q13042 620 aa13.68□□□□□ -0.22
THBS3-202ENST00000428962 VEPH1Q14D04 833 aa13.68□□□□□ -0.22
THBS3-202ENST00000428962 PIGGQ5H8A4 983 aa13.68□□□□□ -0.22
THBS3-202ENST00000428962 KBTBD6Q86V97 674 aa13.68□□□□□ -0.22
THBS3-202ENST00000428962 KBTBD2Q8IY47 623 aa13.68□□□□□ -0.22
THBS3-202ENST00000428962 SHKBP1Q8TBC3 707 aa13.68□□□□□ -0.22
THBS3-202ENST00000428962 DLG3Q92796 817 aa13.68□□□□□ -0.22
THBS3-202ENST00000428962 MYRFLQ96LU7 910 aa13.68□□□□□ -0.22
THBS3-202ENST00000428962 NR1H4Q96RI1 486 aaPredicted RBP13.68□□□□□ -0.22
THBS3-202ENST00000428962 TDRD1Q9BXT4 1180 aaKnown RBP13.68□□□□□ -0.22
THBS3-202ENST00000428962 ADGRE3Q9BY15 652 aa13.68□□□□□ -0.22
THBS3-202ENST00000428962 TAS2R13Q9NYV9 303 aa13.68□□□□□ -0.22
THBS3-202ENST00000428962 HACD3Q9P035 362 aa13.68□□□□□ -0.22
THBS3-202ENST00000428962 SCOCQ9UIL1 159 aa13.68□□□□□ -0.22
THBS3-202ENST00000428962 DNAH12Q6ZR08 3092 aa13.68□□□□□ -0.22
THBS3-202ENST00000428962 CLGNO14967 610 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms