RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 TUBA1AQ71U36 451 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 TTLL6Q8N841 843 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 OR7A2PQ8NGA2 310 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 VPS33AQ96AX1 596 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 GON7Q9BXV9 100 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 TP63Q9H3D4 680 aaPredicted RBP5.15□□□□□ -1.58
RIF1-203ENST00000428287 NEK6Q9HC98 313 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 C20orf96Q9NUD7 363 aaPredicted RBP5.15□□□□□ -1.58
RIF1-203ENST00000428287 TXNDC16Q9P2K2 825 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 TNFRSF10DQ9UBN6 386 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 RNF103-CHMP3A0A140T963 221 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 CCDC195A0A1B0GUA6 201 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 LOC105371267A0A1B0GV96 52 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 TYW5A2RUC4 315 aaKnown RBP5.15□□□□□ -1.58
RIF1-203ENST00000428287 VWA5AO00534 786 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 SNAP29O95721 258 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 AP2A1O95782 977 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 EFNA1P20827 205 aaPredicted RBP5.15□□□□□ -1.58
RIF1-203ENST00000428287 MPSTP25325 297 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 LRPAP1P30533 357 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 EPHX2P34913 555 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 SLC26A3P40879 764 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 TARBP2Q15633 366 aaKnown RBP5.15□□□□□ -1.58
RIF1-203ENST00000428287 LCLAT1Q6UWP7 414 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 RFPL4BQ6ZWI9 263 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 STRADAQ7RTN6 431 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 EMC1Q8N766 993 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 SMG8Q8ND04 991 aaKnown RBP5.15□□□□□ -1.58
RIF1-203ENST00000428287 RXFP2Q8WXD0 754 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 TBC1D20Q96BZ9 403 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 LGALS12Q96DT0 336 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 ASB2Q96Q27 587 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 KIFC3Q9BVG8 833 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 TARS2Q9BW92 718 aaKnown RBP5.15□□□□□ -1.58
RIF1-203ENST00000428287 ZC3H12CQ9C0D7 883 aaKnown RBP5.15□□□□□ -1.58
RIF1-203ENST00000428287 MEAF6Q9HAF1 191 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 CYP3A43Q9HB55 503 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 POLLQ9UGP5 575 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 TESPA1A2RU30 521 aaPredicted RBP5.15□□□□□ -1.59
RIF1-203ENST00000428287 CDK2AP1O14519 115 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 UPK1BO75841 260 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 GOT2P00505 430 aaKnown RBP5.15□□□□□ -1.59
RIF1-203ENST00000428287 ATP6V1B2P21281 511 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 GPX3P22352 226 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 CCND2P30279 289 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 GGT5P36269 586 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 ACOT2P49753 483 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 DYNLT1P63172 113 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 CYP4A22Q5TCH4 519 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 ADAMTSL2Q86TH1 951 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 RBM23Q86U06 439 aaKnown RBP5.15□□□□□ -1.59
RIF1-203ENST00000428287 PIGZQ86VD9 579 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 LDHDQ86WU2 507 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 DHFR2Q86XF0 187 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 WDR49Q8IV35 697 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 DCP1BQ8IZD4 617 aaKnown RBP5.15□□□□□ -1.59
RIF1-203ENST00000428287 FAR1Q8WVX9 515 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 SLC9A7Q96T83 725 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 ANLNQ9NQW6 1124 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 USE1Q9NZ43 259 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 KCNN3Q9UGI6 736 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 CPSF3Q9UKF6 684 aaKnown RBP5.15□□□□□ -1.59
RIF1-203ENST00000428287 KCNU1A8MYU2 1149 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 HSPA4LO95757 839 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 PRR35P0CG20 571 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 IL10P22301 178 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 PSMA4P25789 261 aaKnown RBP5.15□□□□□ -1.59
RIF1-203ENST00000428287 IL12AP29459 219 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 SERPINB10P48595 397 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 ZNF45Q02386 682 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 MVKQ03426 396 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 KRR1Q13601 381 aaKnown RBP5.15□□□□□ -1.59
RIF1-203ENST00000428287 CATSPEREQ5SY80 951 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 C19orf48Q6RUI8 117 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 CHDHQ8NE62 594 aaPredicted RBP5.15□□□□□ -1.59
RIF1-203ENST00000428287 MFSD3Q96ES6 412 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 NODALQ96S42 347 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 EHMT1Q9H9B1 1298 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 RIMBP2O15034 1052 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 NDUFB5O43674 189 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 ACADMP11310 421 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 OXTRP30559 389 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 CDH13P55290 713 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 ACTR2P61160 394 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 UGCGQ16739 394 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 LRRC26Q2I0M4 334 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 SLC27A3Q5K4L6 730 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 ZFP90Q8TF47 636 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 CLEC4DQ8WXI8 215 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 CEP170P1Q96L14 293 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 C1orf74Q96LT6 269 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 GBA2Q9HCG7 927 aaPredicted RBP5.15□□□□□ -1.59
RIF1-203ENST00000428287 XPNPEP3Q9NQH7 507 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 BTG4Q9NY30 223 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 SLCO3A1Q9UIG8 710 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 MED13Q9UHV7 2174 aa5.15□□□□□ -1.59
RIF1-203ENST00000428287 TMEM150BA6NC51 233 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 HTR1EP28566 365 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 PKLRP30613 574 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 SERPINB1P30740 379 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms