RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 INPPL1O15357 1258 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 FKBP6O75344 327 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 PDGFRLQ15198 375 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 DLG2Q15700 870 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 FNBP1LQ5T0N5 605 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 TXNDC8Q6A555 127 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.88□□□□□ -0.19
RPL28-202ENST00000426763 POF1BQ8WVV4 589 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 TBATAQ96M53 351 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 ZNF599Q96NL3 588 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 TSC22D3Q99576 134 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 LTBP4Q8N2S1 1624 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 NDUFB5O43674 189 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 PEX11AO75192 247 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 GALTP07902 379 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 GSTM1P09488 218 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 COL6A2P12110 1019 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 NRIP1P48552 1158 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 GATMP50440 423 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 RPS24P62847 133 aaKnown RBP13.88□□□□□ -0.19
RPL28-202ENST00000426763 PLA2G4EQ3MJ16 856 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 CAPN13Q6MZZ7 669 aaPredicted RBP13.88□□□□□ -0.19
RPL28-202ENST00000426763 CMC1Q7Z7K0 106 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 DHFR2Q86XF0 187 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 ACTRT2Q8TDY3 377 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 SLC44A1Q8WWI5 657 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 CAB39LQ9H9S4 337 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 PNPLA8Q9NP80 782 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 TMEM216Q9P0N5 145 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 GTF2E2P29084 291 aaKnown RBP13.88□□□□□ -0.19
RPL28-202ENST00000426763 GDI1P31150 447 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 SERPINB10P48595 397 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 TRPC1P48995 793 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 VITQ6UXI7 678 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 SLC39A5Q6ZMH5 540 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 GLMNQ92990 594 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 SMOC2Q9H3U7 446 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 IL23AQ9NPF7 189 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 EIF2B3Q9NR50 452 aaKnown RBP13.88□□□□□ -0.19
RPL28-202ENST00000426763 FNIP2Q9P278 1114 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 IGSF9Q9P2J2 1179 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 SORCS3Q9UPU3 1222 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 KCNH1O95259 989 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 CSF2RAP15509 400 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 HOXD13P35453 343 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 GJA5P36382 358 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 TRAF2Q12933 501 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 CARD16Q5EG05 197 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 TBCELQ5QJ74 424 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 TSTD2Q5T7W7 516 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 TRIM69Q86WT6 500 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 SLC22A17Q8WUG5 538 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 ZFYVE19Q96K21 471 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 TRMT61BQ9BVS5 477 aaKnown RBP13.87□□□□□ -0.19
RPL28-202ENST00000426763 KRT84Q9NSB2 600 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 INTS7Q9NVH2 962 aaKnown RBP13.87□□□□□ -0.19
RPL28-202ENST00000426763 NAV1Q8NEY1 1877 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 DNAJC25-GNG10A0A024R161 153 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 ILVBLA1L0T0 632 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 ZNF623O75123 536 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 GPR32O75388 356 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 ADH5P11766 374 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 HCAR3P49019 387 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 BST1Q10588 318 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 SQLEQ14534 574 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 UBXN2BQ14CS0 331 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 PDK4Q16654 411 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 SAMD4BQ5PRF9 694 aaKnown RBP13.87□□□□□ -0.19
RPL28-202ENST00000426763 CRELD2Q6UXH1 353 aaPredicted RBP13.87□□□□□ -0.19
RPL28-202ENST00000426763 KIAA0408Q6ZU52 694 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 POU5F2Q8N7G0 328 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 CD101Q93033 1021 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 BTBD10Q9BSF8 475 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 PIGVQ9NUD9 493 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 MT-CYBP00156 380 aaPredicted RBP13.87□□□□□ -0.19
RPL28-202ENST00000426763 IFNA16P05015 189 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 HGFP14210 728 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 AP5B1Q2VPB7 878 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 RNASEH2BQ5TBB1 312 aaKnown RBP13.87□□□□□ -0.19
RPL28-202ENST00000426763 TAS1R3Q7RTX0 852 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 C17orf64Q86WR6 236 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 TNS4Q8IZW8 715 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 PHF21AQ96BD5 680 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 NMUR1Q9HB89 426 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 SAR1AQ9NR31 198 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 IGKV6D-21A0A0A0MT36 114 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 MYADML2A6NDP7 307 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 EIF4E1BA6NMX2 242 aaKnown RBP13.87□□□□□ -0.19
RPL28-202ENST00000426763 AZIN1O14977 448 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 ZNHIT3Q15649 155 aaPredicted RBP13.87□□□□□ -0.19
RPL28-202ENST00000426763 BRSK1Q8TDC3 778 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 MYCBPQ99417 103 aaPredicted RBP13.87□□□□□ -0.19
RPL28-202ENST00000426763 TRMOQ9BU70 441 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 ABCG8Q9H221 673 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 CORO1CQ9ULV4 474 aaPredicted RBP13.87□□□□□ -0.19
RPL28-202ENST00000426763 FAM220BPB1ANY3 271 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 ECT2LQ008S8 904 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 KLC1Q07866 573 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 UPP1Q16831 310 aa13.87□□□□□ -0.19
RPL28-202ENST00000426763 ATXN7L2Q5T6C5 722 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms