RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 CASP10Q92851 521 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 FBXL20Q96IG2 436 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 TBATAQ96M53 351 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 NSUN5Q96P11 429 aaKnown RBP7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 TMEM209Q96SK2 561 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 ADI1Q9BV57 179 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 RGS18Q9NS28 235 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 TMLHEQ9NVH6 421 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 SARDHQ9UL12 918 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 ZNF711Q9Y462 761 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 DNAJC15Q9Y5T4 150 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 PTCH2Q9Y6C5 1203 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 H3BMM5 538 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 J3KR12 359 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 UBXN8O00124 270 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 CLOCKO15516 846 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 SUPT3HO75486 399 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 POMCP01189 267 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 HGFP14210 728 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 CAPN3P20807 821 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 GPX3P22352 226 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 PSMA4P25789 261 aaKnown RBP7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 LEPRP48357 1165 aaKnown RBP7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 CYP51A1Q16850 503 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 GPR107Q5VW38 600 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 FAM45BPQ6NSW5 357 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 KIAA0408Q6ZU52 694 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 CHST15Q7LFX5 561 aaPredicted RBP7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 GPR142Q7Z601 462 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 SCN4BQ8IWT1 228 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 MIER2Q8N344 545 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 ANKFN1Q8N957 763 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 GABPB2Q8TAK5 448 aaPredicted RBP7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 FAM45AQ8TCE6 357 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 PTCD2Q8WV60 388 aaKnown RBP7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 VPS33AQ96AX1 596 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 PTERQ96BW5 349 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 SEPHS2Q99611 448 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 ANKRD60Q9BZ19 345 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 CCM2LQ9NUG4 571 aaPredicted RBP7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 TBC1D13Q9NVG8 400 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 OAZ3Q9UMX2 235 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 CDK14O94921 469 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 BMP2P12643 396 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 OXTRP30559 389 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 GRIK1P39086 918 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 YAP1P46937 504 aaKnown RBP7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 PSEN2P49810 448 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 APLP1P51693 650 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 CLCN2P51788 898 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 CRYBB1P53674 252 aaPredicted RBP7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 SLC10A7Q0GE19 358 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 MERTKQ12866 999 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 PLCL1Q15111 1095 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 PCBP1Q15365 356 aaKnown RBP eCLIP7.53□□□□□ -1.22e-12■□□□□ 8.4
SMARCC1-202ENST00000425518 CILP2Q8IUL8 1156 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 CMTR2Q8IYT2 770 aaKnown RBP7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 TMEM86AQ8N2M4 240 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 LZTR1Q8N653 840 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 NPLOC4Q8TAT6 608 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 HM13Q8TCT9 377 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 MAGEE2Q8TD90 523 aaPredicted RBP7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 BLOC1S5Q8TDH9 187 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 TWIST2Q8WVJ9 160 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 STON2Q8WXE9 905 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 C12orf43Q96C57 262 aaKnown RBP7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 THAP11Q96EK4 314 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 UBXN10Q96LJ8 280 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 MRGBPQ9NV56 204 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 CMTM6Q9NX76 183 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 TIMM22Q9Y584 194 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 SQORQ9Y6N5 450 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 MBLAC1A4D2B0 266 aaPredicted RBP7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 E9PAM4 449 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 AZIN1O14977 448 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 IRAK2O43187 625 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 BAIAP3O94812 1187 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 F2P00734 622 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 TFPTP0C1Z6 253 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 DIO3P55073 304 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 RABL3Q5HYI8 236 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 SDHAF4Q5VUM1 108 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 TIGD7Q6NT04 549 aaPredicted RBP7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 RAB44Q7Z6P3 723 aaPredicted RBP7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 LRRTM3Q86VH5 581 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 OR13J1Q8NGT2 312 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 ISOC1Q96CN7 298 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 TRIM15Q9C019 465 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 PAIP1Q9H074 479 aaKnown RBP7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 CXorf21Q9HAI6 301 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 SEMA4BQ9NPR2 832 aaPredicted RBP7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 SLC38A7Q9NVC3 462 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 CHCHD3Q9NX63 227 aaKnown RBP7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 ANKRD12Q6UB98 2062 aa7.53□□□□□ -1.2
SMARCC1-202ENST00000425518 NCF1BA6NI72 391 aaPredicted RBP7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 NCF1CA8MVU1 366 aaPredicted RBP7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 EI24O14681 340 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 S1PR4O95977 384 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 NCF1P14598 390 aaPredicted RBP7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 ACADVLP49748 655 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms