RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 FAM159BA6NKW6 160 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 FAM170BA6NMN3 283 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 UPK3BL1B0FP48 263 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 CHURC1-FNTBB4DL54 471 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 UPK3BL2E5RIL1 263 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 HAX1O00165 279 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 RGS16O15492 202 aaPredicted RBP10.34□□□□□ -0.75
MDC1-205ENST00000425072 RPP40O75818 363 aaKnown RBP10.34□□□□□ -0.75
MDC1-205ENST00000425072 DNTTP04053 509 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 CTSLP07711 333 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 INHBAP08476 426 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 PIRTP0C851 137 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 HOXB2P14652 356 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 CNTFP26441 200 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 VIPR1P32241 457 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 WASP42768 502 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 SERPINB9P50453 376 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 SATB1Q01826 763 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 KRT71Q3SY84 523 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 KBTBD12Q3ZCT8 623 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 HSP90AA5PQ58FG0 334 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 GRTP1Q5TC63 336 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 ZNF776Q68DI1 518 aaPredicted RBP10.34□□□□□ -0.75
MDC1-205ENST00000425072 MRNIPQ6NTE8 343 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 ADGRD1Q6QNK2 874 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 CRTC1Q6UUV9 634 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 CES3Q6UWW8 571 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 ERN2Q76MJ5 926 aaKnown RBP10.34□□□□□ -0.75
MDC1-205ENST00000425072 TAOK1Q7L7X3 1001 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 KCNMB4Q86W47 210 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 SLC26A11Q86WA9 606 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 TMPRSS6Q8IU80 811 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 GJD3Q8N144 294 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 PPM1NQ8N819 430 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 OR4K2Q8NGD2 314 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 OR4L1Q8NH43 312 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 EZH1Q92800 747 aaPredicted RBP10.34□□□□□ -0.75
MDC1-205ENST00000425072 HDAC10Q969S8 669 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 PGM2Q96G03 612 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 TCF12Q99081 682 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 OMDQ99983 421 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 FAM167BQ9BTA0 163 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 POLMQ9NP87 494 aaPredicted RBP10.34□□□□□ -0.75
MDC1-205ENST00000425072 IL17CQ9P0M4 197 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 ZFATQ9P243 1243 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 CA14Q9ULX7 337 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 MMP17Q9ULZ9 603 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 NDRG2Q9UN36 371 aaKnown RBP10.34□□□□□ -0.75
MDC1-205ENST00000425072 VPS9D1Q9Y2B5 631 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 ZNF711Q9Y462 761 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 SPO11Q9Y5K1 396 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 ARL5AQ9Y689 179 aa10.34□□□□□ -0.75
MDC1-205ENST00000425072 IQANK1A0A1B0GTG1 560 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 GOLGA8KD6RF30 607 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 H0Y858 1186 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 H7C0S8 307 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 PSMD11O00231 422 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 NEMP1O14524 444 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 RNF40O75150 1001 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 SASH3O75995 380 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 KRT37O76014 449 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 KRT38O76015 456 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 CLDN7O95471 211 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 SHBGP04278 402 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 ALPIP09923 528 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 ERVK-10P10266 1014 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 C7P10643 843 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 CHRNB1P11230 501 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 ACADMP11310 421 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 CD72P21854 359 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 SPRP35270 261 aaPredicted RBP10.33□□□□□ -0.76
MDC1-205ENST00000425072 ARCN1P48444 511 aaKnown RBP10.33□□□□□ -0.76
MDC1-205ENST00000425072 POLD2P49005 469 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 NEK3P51956 506 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 DGKEP52429 567 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 PTSQ03393 145 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 ZNF844Q08AG5 666 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 DNAJC3Q13217 504 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 CST6Q15828 149 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 CDKN3Q16667 212 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 FASTKD1Q53R41 847 aaKnown RBP10.33□□□□□ -0.76
MDC1-205ENST00000425072 TEDDM1Q5T9Z0 273 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 LYPLAL1Q5VWZ2 237 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 CERS6Q6ZMG9 384 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 KIAA0408Q6ZU52 694 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 KBTBD6Q86V97 674 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 NLRP8Q86W28 1048 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 NRSN1Q8IZ57 195 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 TTC30BQ8N4P2 665 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 GPR150Q8NGU9 434 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 OR2W6PQ8NHA6 318 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 RPLP0P6Q8NHW5 317 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 DTX3LQ8TDB6 740 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 SLC44A1Q8WWI5 657 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.33□□□□□ -0.761e-6■■■■■ 31.4
MDC1-205ENST00000425072 PBXIP1Q96AQ6 731 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 VOPP1Q96AW1 172 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 MTBPQ96DY7 904 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 TBATAQ96M53 351 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 ZNF778Q96MU6 729 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms