RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 TJP3O95049 919 aa22.34■■□□□ 1.17
PTCHD3P2-201ENST00000424937 LDOC1O95751 146 aaPredicted RBP22.34■■□□□ 1.17
PTCHD3P2-201ENST00000424937 PTMAP06454 111 aaKnown RBP22.34■■□□□ 1.17
PTCHD3P2-201ENST00000424937 ATXN1LP0C7T5 689 aaKnown RBP22.34■■□□□ 1.17
PTCHD3P2-201ENST00000424937 JUNDP17535 347 aa22.34■■□□□ 1.17
PTCHD3P2-201ENST00000424937 XRCC4Q13426 336 aa22.34■■□□□ 1.17
PTCHD3P2-201ENST00000424937 GALNT3Q14435 633 aa22.34■■□□□ 1.17
PTCHD3P2-201ENST00000424937 ESRP1Q6NXG1 681 aaKnown RBP22.34■■□□□ 1.17
PTCHD3P2-201ENST00000424937 PHACTR4Q8IZ21 702 aa22.34■■□□□ 1.17
PTCHD3P2-201ENST00000424937 RBFAQ8N0V3 343 aa22.34■■□□□ 1.17
PTCHD3P2-201ENST00000424937 PELI3Q8N2H9 469 aa22.34■■□□□ 1.17
PTCHD3P2-201ENST00000424937 SLC25A45Q8N413 288 aa22.34■■□□□ 1.17
PTCHD3P2-201ENST00000424937 PNPLA1Q8N8W4 532 aa22.34■■□□□ 1.17
PTCHD3P2-201ENST00000424937 ZNF548Q8NEK5 533 aaPredicted RBP22.34■■□□□ 1.17
PTCHD3P2-201ENST00000424937 SPATA22Q8NHS9 363 aa22.34■■□□□ 1.17
PTCHD3P2-201ENST00000424937 HTR3CQ8WXA8 447 aa22.34■■□□□ 1.17
PTCHD3P2-201ENST00000424937 FAM118BQ9BPY3 351 aa22.34■■□□□ 1.17
PTCHD3P2-201ENST00000424937 APOBEC3BQ9UH17 382 aaKnown RBP22.34■■□□□ 1.17
PTCHD3P2-201ENST00000424937 ANGPTL2Q9UKU9 493 aa22.34■■□□□ 1.17
PTCHD3P2-201ENST00000424937 DNPEPQ9ULA0 475 aa22.34■■□□□ 1.17
PTCHD3P2-201ENST00000424937 GOLGA6CA6NDK9 693 aa22.33■■□□□ 1.17
PTCHD3P2-201ENST00000424937 GOLGA6BA6NDN3 693 aa22.33■■□□□ 1.17
PTCHD3P2-201ENST00000424937 ENC1O14682 589 aa22.33■■□□□ 1.17
PTCHD3P2-201ENST00000424937 TOP3BO95985 862 aaKnown RBP22.33■■□□□ 1.17
PTCHD3P2-201ENST00000424937 MT-CYBP00156 380 aaPredicted RBP22.33■■□□□ 1.17
PTCHD3P2-201ENST00000424937 GOLGA6DP0CG33 693 aa22.33■■□□□ 1.17
PTCHD3P2-201ENST00000424937 ZNF30P17039 623 aa22.33■■□□□ 1.17
PTCHD3P2-201ENST00000424937 NFKB1P19838 968 aa22.33■■□□□ 1.17
PTCHD3P2-201ENST00000424937 HTR1BP28222 390 aa22.33■■□□□ 1.17
PTCHD3P2-201ENST00000424937 QPCTQ16769 361 aa22.33■■□□□ 1.17
PTCHD3P2-201ENST00000424937 HS1BP3Q53T59 392 aa22.33■■□□□ 1.17
PTCHD3P2-201ENST00000424937 CCDC157Q569K6 752 aa22.33■■□□□ 1.17
PTCHD3P2-201ENST00000424937 Q6ZVL8 140 aa22.33■■□□□ 1.17
PTCHD3P2-201ENST00000424937 KDELC2Q7Z4H8 507 aa22.33■■□□□ 1.17
PTCHD3P2-201ENST00000424937 SLCO6A1Q86UG4 719 aa22.33■■□□□ 1.17
PTCHD3P2-201ENST00000424937 ZNF567Q8N184 647 aa22.33■■□□□ 1.17
PTCHD3P2-201ENST00000424937 HES6Q96HZ4 224 aa22.33■■□□□ 1.17
PTCHD3P2-201ENST00000424937 ADGRE3Q9BY15 652 aa22.33■■□□□ 1.17
PTCHD3P2-201ENST00000424937 TCEAL2Q9H3H9 227 aaPredicted RBP22.33■■□□□ 1.17
PTCHD3P2-201ENST00000424937 C10orf88Q9H8K7 445 aa22.33■■□□□ 1.17
PTCHD3P2-201ENST00000424937 LZTFL1Q9NQ48 299 aa22.33■■□□□ 1.17
PTCHD3P2-201ENST00000424937 TOR4AQ9NXH8 423 aa22.33■■□□□ 1.17
PTCHD3P2-201ENST00000424937 KCTD5Q9NXV2 234 aa22.33■■□□□ 1.17
PTCHD3P2-201ENST00000424937 GOLGA6AQ9NYA3 693 aa22.33■■□□□ 1.17
PTCHD3P2-201ENST00000424937 PNMA8BQ9ULN7 279 aaPredicted RBP22.33■■□□□ 1.17
PTCHD3P2-201ENST00000424937 F5H423 210 aaPredicted RBP22.32■■□□□ 1.16
PTCHD3P2-201ENST00000424937 K7ESM1 405 aa22.32■■□□□ 1.16
PTCHD3P2-201ENST00000424937 CACNB4O00305 520 aaPredicted RBP22.32■■□□□ 1.16
PTCHD3P2-201ENST00000424937 TRIM38O00635 465 aa22.32■■□□□ 1.16
PTCHD3P2-201ENST00000424937 C1SP09871 688 aa22.32■■□□□ 1.16
PTCHD3P2-201ENST00000424937 RBL1P28749 1068 aa22.32■■□□□ 1.16
PTCHD3P2-201ENST00000424937 CD68P34810 354 aaPredicted RBP22.32■■□□□ 1.16
PTCHD3P2-201ENST00000424937 EIF3EP60228 445 aaKnown RBP22.32■■□□□ 1.16
PTCHD3P2-201ENST00000424937 PPARDQ03181 441 aa22.32■■□□□ 1.16
PTCHD3P2-201ENST00000424937 SLC14A2Q15849 920 aa22.32■■□□□ 1.16
PTCHD3P2-201ENST00000424937 FAXCQ5TGI0 409 aa22.32■■□□□ 1.16
PTCHD3P2-201ENST00000424937 RAET1GQ6H3X3 334 aa22.32■■□□□ 1.16
PTCHD3P2-201ENST00000424937 PNCKQ6P2M8 343 aa22.32■■□□□ 1.16
PTCHD3P2-201ENST00000424937 ENPP7Q6UWV6 458 aa22.32■■□□□ 1.16
PTCHD3P2-201ENST00000424937 CDKL3Q8IVW4 592 aaPredicted RBP22.32■■□□□ 1.16
PTCHD3P2-201ENST00000424937 OR4C6Q8NH72 309 aa22.32■■□□□ 1.16
PTCHD3P2-201ENST00000424937 LMX1AQ8TE12 382 aa22.32■■□□□ 1.16
PTCHD3P2-201ENST00000424937 BTN2A2Q8WVV5 523 aa22.32■■□□□ 1.16
PTCHD3P2-201ENST00000424937 FUBP1Q96AE4 644 aaKnown RBP22.32■■□□□ 1.16
PTCHD3P2-201ENST00000424937 WDR92Q96MX6 357 aa22.32■■□□□ 1.16
PTCHD3P2-201ENST00000424937 TRIB3Q96RU7 358 aa22.32■■□□□ 1.16
PTCHD3P2-201ENST00000424937 VAT1Q99536 393 aa22.32■■□□□ 1.16
PTCHD3P2-201ENST00000424937 MLPHQ9BV36 600 aaPredicted RBP22.32■■□□□ 1.16
PTCHD3P2-201ENST00000424937 SLC13A1Q9BZW2 595 aa22.32■■□□□ 1.16
PTCHD3P2-201ENST00000424937 WDR26Q9H7D7 661 aa22.32■■□□□ 1.16
PTCHD3P2-201ENST00000424937 UBP1Q9NZI7 540 aa22.32■■□□□ 1.16
PTCHD3P2-201ENST00000424937 KLQ9UEF7 1012 aa22.32■■□□□ 1.16
PTCHD3P2-201ENST00000424937 CD84Q9UIB8 345 aa22.32■■□□□ 1.16
PTCHD3P2-201ENST00000424937 C1orf232A0A0U1RR37 186 aa22.31■■□□□ 1.16
PTCHD3P2-201ENST00000424937 NEMP2A6NFY4 417 aa22.31■■□□□ 1.16
PTCHD3P2-201ENST00000424937 AQP9O43315 295 aa22.31■■□□□ 1.16
PTCHD3P2-201ENST00000424937 SIGLEC6O43699 453 aa22.31■■□□□ 1.16
PTCHD3P2-201ENST00000424937 HYAL3O43820 417 aaPredicted RBP22.31■■□□□ 1.16
PTCHD3P2-201ENST00000424937 PMPCBO75439 489 aa22.31■■□□□ 1.16
PTCHD3P2-201ENST00000424937 TRIM16O95361 564 aa22.31■■□□□ 1.16
PTCHD3P2-201ENST00000424937 ALPPL2P10696 532 aa22.31■■□□□ 1.16
PTCHD3P2-201ENST00000424937 RBP3P10745 1247 aa22.31■■□□□ 1.16
PTCHD3P2-201ENST00000424937 TSHRP16473 764 aa22.31■■□□□ 1.16
PTCHD3P2-201ENST00000424937 SPINK2P20155 84 aa22.31■■□□□ 1.16
PTCHD3P2-201ENST00000424937 STC1P52823 247 aa22.31■■□□□ 1.16
PTCHD3P2-201ENST00000424937 KIAA1024LP59773 190 aa22.31■■□□□ 1.16
PTCHD3P2-201ENST00000424937 DNAJC3Q13217 504 aa22.31■■□□□ 1.16
PTCHD3P2-201ENST00000424937 RFLNAQ6ZTI6 216 aa22.31■■□□□ 1.16
PTCHD3P2-201ENST00000424937 PID1Q7Z2X4 250 aa22.31■■□□□ 1.16
PTCHD3P2-201ENST00000424937 HID1Q8IV36 788 aa22.31■■□□□ 1.16
PTCHD3P2-201ENST00000424937 CBARPQ8N350 705 aaPredicted RBP22.31■■□□□ 1.16
PTCHD3P2-201ENST00000424937 ATL2Q8NHH9 583 aa22.31■■□□□ 1.16
PTCHD3P2-201ENST00000424937 TSACCQ96A04 125 aaPredicted RBP22.31■■□□□ 1.16
PTCHD3P2-201ENST00000424937 TADA1Q96BN2 335 aa22.31■■□□□ 1.16
PTCHD3P2-201ENST00000424937 LYSMD1Q96S90 227 aa22.31■■□□□ 1.16
PTCHD3P2-201ENST00000424937 LRRC61Q9BV99 259 aa22.31■■□□□ 1.16
PTCHD3P2-201ENST00000424937 NLGN3Q9NZ94 848 aa22.31■■□□□ 1.16
PTCHD3P2-201ENST00000424937 GOLGA6L9A6NEM1 432 aa22.3■■□□□ 1.16
PTCHD3P2-201ENST00000424937 ANKRD66B4E2M5 251 aa22.3■■□□□ 1.16
PTCHD3P2-201ENST00000424937 SCAMP1O15126 338 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms