RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 DHX9Q08211 1270 aaKnown RBP15.72■□□□□ 0.11
DDX55-203ENST00000421670 PTPRCAPQ14761 206 aa15.72■□□□□ 0.11
DDX55-203ENST00000421670 BBS9Q3SYG4 887 aa15.72■□□□□ 0.11
DDX55-203ENST00000421670 TMEM52BQ4KMG9 183 aa15.72■□□□□ 0.11
DDX55-203ENST00000421670 HP1BP3Q5SSJ5 553 aaPredicted RBP15.72■□□□□ 0.11
DDX55-203ENST00000421670 HSD11B1LQ7Z5J1 315 aa15.72■□□□□ 0.11
DDX55-203ENST00000421670 GSPT2Q8IYD1 628 aaKnown RBP15.72■□□□□ 0.11
DDX55-203ENST00000421670 PDIK1LQ8N165 341 aa15.72■□□□□ 0.11
DDX55-203ENST00000421670 TTC30BQ8N4P2 665 aa15.72■□□□□ 0.11
DDX55-203ENST00000421670 OR2T34Q8NGX1 318 aa15.72■□□□□ 0.11
DDX55-203ENST00000421670 BRSK1Q8TDC3 778 aa15.72■□□□□ 0.11
DDX55-203ENST00000421670 KLK6Q92876 244 aa15.72■□□□□ 0.11
DDX55-203ENST00000421670 TRIM56Q9BRZ2 755 aaKnown RBP15.72■□□□□ 0.11
DDX55-203ENST00000421670 LRFN3Q9BTN0 628 aa15.72■□□□□ 0.11
DDX55-203ENST00000421670 IL22Q9GZX6 179 aa15.72■□□□□ 0.11
DDX55-203ENST00000421670 BFARQ9NZS9 450 aa15.72■□□□□ 0.11
DDX55-203ENST00000421670 HACD3Q9P035 362 aa15.72■□□□□ 0.11
DDX55-203ENST00000421670 NFU1Q9UMS0 254 aa15.72■□□□□ 0.11
DDX55-203ENST00000421670 KCTD3Q9Y597 815 aa15.72■□□□□ 0.11
DDX55-203ENST00000421670 PLXNB3Q9ULL4 1909 aa15.72■□□□□ 0.11
DDX55-203ENST00000421670 A0A1W2PQU0 124 aa15.71■□□□□ 0.11
DDX55-203ENST00000421670 IGLON5A6NGN9 336 aa15.71■□□□□ 0.11
DDX55-203ENST00000421670 H0Y858 1186 aa15.71■□□□□ 0.11
DDX55-203ENST00000421670 AP3B1O00203 1094 aa15.71■□□□□ 0.11
DDX55-203ENST00000421670 GALR2O43603 387 aaPredicted RBP15.71■□□□□ 0.11
DDX55-203ENST00000421670 LDB2O43679 373 aa15.71■□□□□ 0.11
DDX55-203ENST00000421670 SP9P0CG40 484 aa15.71■□□□□ 0.11
DDX55-203ENST00000421670 ZNF30P17039 623 aa15.71■□□□□ 0.11
DDX55-203ENST00000421670 GM2AP17900 193 aa15.71■□□□□ 0.11
DDX55-203ENST00000421670 NPY2RP49146 381 aa15.71■□□□□ 0.11
DDX55-203ENST00000421670 STC1P52823 247 aa15.71■□□□□ 0.11
DDX55-203ENST00000421670 ARL4CP56559 192 aa15.71■□□□□ 0.11
DDX55-203ENST00000421670 TUBB4BP68371 445 aa15.71■□□□□ 0.11
DDX55-203ENST00000421670 RPL6Q02878 288 aaKnown RBP15.71■□□□□ 0.11
DDX55-203ENST00000421670 CUL1Q13616 776 aa15.71■□□□□ 0.11
DDX55-203ENST00000421670 FASTKD3Q14CZ7 662 aaKnown RBP15.71■□□□□ 0.11
DDX55-203ENST00000421670 TAF1AQ15573 450 aaPredicted RBP15.71■□□□□ 0.11
DDX55-203ENST00000421670 CASC4Q6P4E1 433 aa15.71■□□□□ 0.11
DDX55-203ENST00000421670 RFLNAQ6ZTI6 216 aa15.71■□□□□ 0.11
DDX55-203ENST00000421670 CCDC25Q86WR0 208 aa15.71■□□□□ 0.11
DDX55-203ENST00000421670 DEFB119Q8N690 84 aa15.71■□□□□ 0.11
DDX55-203ENST00000421670 PPHLN1Q8NEY8 458 aaKnown RBP15.71■□□□□ 0.11
DDX55-203ENST00000421670 ZNF778Q96MU6 729 aa15.71■□□□□ 0.11
DDX55-203ENST00000421670 WDR83Q9BRX9 315 aaKnown RBP15.71■□□□□ 0.11
DDX55-203ENST00000421670 FRMD8Q9BZ67 464 aaPredicted RBP15.71■□□□□ 0.11
DDX55-203ENST00000421670 KDM4CQ9H3R0 1056 aa15.71■□□□□ 0.11
DDX55-203ENST00000421670 TRABDQ9H4I3 376 aa15.71■□□□□ 0.11
DDX55-203ENST00000421670 BPIFA1Q9NP55 256 aa15.71■□□□□ 0.11
DDX55-203ENST00000421670 TCAF1Q9Y4C2 921 aa15.71■□□□□ 0.11
DDX55-203ENST00000421670 HEATR9A2RTY3 570 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 NDUFS2O75306 463 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 PPFIA2O75334 1257 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 CRTAMO95727 393 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 MYBL2P10244 700 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 ETV3P41162 512 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 PDIA2Q13087 525 aaKnown RBP15.7■□□□□ 0.1
DDX55-203ENST00000421670 ACOX1Q15067 660 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 TMEM259Q4ZIN3 620 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 KIAA1161Q6NSJ0 714 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 TMC3Q7Z5M5 1100 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 HORMAD1Q86X24 394 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 OR13C4Q8NGS5 318 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 SIGLEC10Q96LC7 697 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 SRPK1Q96SB4 655 aaKnown RBP15.7■□□□□ 0.1
DDX55-203ENST00000421670 CHRAC1Q9NRG0 131 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 CD84Q9UIB8 345 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 FNDC3AQ9Y2H6 1198 aaKnown RBP15.7■□□□□ 0.1
DDX55-203ENST00000421670 MAD1L1Q9Y6D9 718 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 GON4LQ3T8J9 2241 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 SDK1Q7Z5N4 2213 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 SDR42E2A6NKP2 422 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 C2orf81A6NN90 581 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 DLL1O00548 723 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 CCL22O00626 93 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 RPP40O75818 363 aaKnown RBP15.7■□□□□ 0.1
DDX55-203ENST00000421670 FSBPO95073 299 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 IGHV4-34P06331 123 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 ADRA1DP25100 572 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 HMGCLP35914 325 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 ZNF140P52738 457 aaPredicted RBP15.7■□□□□ 0.1
DDX55-203ENST00000421670 VSNL1P62760 191 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 RPS21P63220 83 aaKnown RBP15.7■□□□□ 0.1
DDX55-203ENST00000421670 TMPRSS15P98073 1019 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 FGL2Q14314 439 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 ZNF284Q2VY69 593 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 ZNF528Q3MIS6 628 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 DNAJC21Q5F1R6 531 aaKnown RBP15.7■□□□□ 0.1
DDX55-203ENST00000421670 CES3Q6UWW8 571 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 Q6ZVL8 140 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 MICALCLQ6ZW33 695 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 TRIM69Q86WT6 500 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 ANKMY2Q8IV38 441 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 IGDCC3Q8IVU1 814 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 OR4K2Q8NGD2 314 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 NELL1Q92832 810 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 DNAJC1Q96KC8 554 aaKnown RBP15.7■□□□□ 0.1
DDX55-203ENST00000421670 COQ10AQ96MF6 247 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 RANBP9Q96S59 729 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 FMO2Q99518 471 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 FAM126AQ9BYI3 521 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms