RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 NUS1Q96E22 293 aa17.39■□□□□ 0.37
MSH6-203ENST00000420813 TMEM168Q9H0V1 697 aa17.39■□□□□ 0.37
MSH6-203ENST00000420813 MRPL40Q9NQ50 206 aaKnown RBP17.39■□□□□ 0.37
MSH6-203ENST00000420813 ETNK2Q9NVF9 386 aa17.39■□□□□ 0.37
MSH6-203ENST00000420813 PHTF1Q9UMS5 762 aa17.39■□□□□ 0.37
MSH6-203ENST00000420813 PCDHGC4Q9Y5F7 938 aa17.39■□□□□ 0.37
MSH6-203ENST00000420813 PCDHGA7Q9Y5G6 932 aa17.39■□□□□ 0.37
MSH6-203ENST00000420813 A0A1W2PQJ5 194 aa17.38■□□□□ 0.37
MSH6-203ENST00000420813 PRSS38A1L453 326 aa17.38■□□□□ 0.37
MSH6-203ENST00000420813 CAPN8A6NHC0 703 aa17.38■□□□□ 0.37
MSH6-203ENST00000420813 A8MX80 341 aa17.38■□□□□ 0.37
MSH6-203ENST00000420813 NOBOXO60393 691 aa17.38■□□□□ 0.37
MSH6-203ENST00000420813 HEXIM1O94992 359 aaKnown RBP17.38■□□□□ 0.37
MSH6-203ENST00000420813 RARAP10276 462 aa17.38■□□□□ 0.37
MSH6-203ENST00000420813 CYP2A6P11509 494 aaPredicted RBP17.38■□□□□ 0.37
MSH6-203ENST00000420813 TCF4P15884 667 aa17.38■□□□□ 0.37
MSH6-203ENST00000420813 HLTFQ14527 1009 aaKnown RBP eCLIP17.38■□□□□ 0.37
MSH6-203ENST00000420813 C14orf28Q4W4Y0 310 aa17.38■□□□□ 0.37
MSH6-203ENST00000420813 TDRD12Q587J7 1177 aaKnown RBP17.38■□□□□ 0.37
MSH6-203ENST00000420813 HGSNATQ68CP4 663 aa17.38■□□□□ 0.37
MSH6-203ENST00000420813 PELI3Q8N2H9 469 aa17.38■□□□□ 0.37
MSH6-203ENST00000420813 CBARPQ8N350 705 aaPredicted RBP17.38■□□□□ 0.37
MSH6-203ENST00000420813 FBXO39Q8N4B4 442 aa17.38■□□□□ 0.37
MSH6-203ENST00000420813 PDCD6IPQ8WUM4 868 aaKnown RBP17.38■□□□□ 0.37
MSH6-203ENST00000420813 LGR4Q9BXB1 951 aa17.38■□□□□ 0.37
MSH6-203ENST00000420813 TEX101Q9BY14 249 aa17.38■□□□□ 0.37
MSH6-203ENST00000420813 NOD2Q9HC29 1040 aa17.38■□□□□ 0.37
MSH6-203ENST00000420813 PCDH18Q9HCL0 1135 aa17.38■□□□□ 0.37
MSH6-203ENST00000420813 EPB41L5Q9HCM4 733 aa17.38■□□□□ 0.37
MSH6-203ENST00000420813 CYP4F12Q9HCS2 524 aa17.38■□□□□ 0.37
MSH6-203ENST00000420813 PHPT1Q9NRX4 125 aaPredicted RBP17.38■□□□□ 0.37
MSH6-203ENST00000420813 RCOR3Q9P2K3 495 aaPredicted RBP17.38■□□□□ 0.37
MSH6-203ENST00000420813 IP6K2Q9UHH9 426 aa17.38■□□□□ 0.37
MSH6-203ENST00000420813 ACSL6Q9UKU0 697 aa17.38■□□□□ 0.37
MSH6-203ENST00000420813 TTC24A2A3L6 582 aaPredicted RBP17.37■□□□□ 0.37
MSH6-203ENST00000420813 NUDT21O43809 227 aaKnown RBP17.37■□□□□ 0.37
MSH6-203ENST00000420813 TEAD1P28347 426 aa17.37■□□□□ 0.37
MSH6-203ENST00000420813 UGT1A5P35504 534 aa17.37■□□□□ 0.37
MSH6-203ENST00000420813 MMP13P45452 471 aa17.37■□□□□ 0.37
MSH6-203ENST00000420813 SLC25A11Q02978 314 aaKnown RBP17.37■□□□□ 0.37
MSH6-203ENST00000420813 TRAF2Q12933 501 aa17.37■□□□□ 0.37
MSH6-203ENST00000420813 TAF1BQ53T94 588 aaPredicted RBP17.37■□□□□ 0.37
MSH6-203ENST00000420813 MARC1Q5VT66 337 aa17.37■□□□□ 0.37
MSH6-203ENST00000420813 SPECC1LQ69YQ0 1117 aa17.37■□□□□ 0.37
MSH6-203ENST00000420813 CAVIN1Q6NZI2 390 aaKnown RBP17.37■□□□□ 0.37
MSH6-203ENST00000420813 LRRC49Q8IUZ0 686 aa17.37■□□□□ 0.37
MSH6-203ENST00000420813 ZNF843Q8N446 348 aa17.37■□□□□ 0.37
MSH6-203ENST00000420813 KIAA1524Q8TCG1 905 aa17.37■□□□□ 0.37
MSH6-203ENST00000420813 TMEM159Q96B96 161 aa17.37■□□□□ 0.37
MSH6-203ENST00000420813 DTD2Q96FN9 168 aa17.37■□□□□ 0.37
MSH6-203ENST00000420813 SCRN2Q96FV2 425 aa17.37■□□□□ 0.37
MSH6-203ENST00000420813 MCCC1Q96RQ3 725 aaPredicted RBP17.37■□□□□ 0.37
MSH6-203ENST00000420813 FUCA2Q9BTY2 467 aa17.37■□□□□ 0.37
MSH6-203ENST00000420813 FOXP3Q9BZS1 431 aa17.37■□□□□ 0.37
MSH6-203ENST00000420813 DPEP2Q9H4A9 486 aa17.37■□□□□ 0.37
MSH6-203ENST00000420813 ZNF462Q96JM2 2506 aa17.36■□□□□ 0.37
MSH6-203ENST00000420813 K7ENP7 123 aa17.36■□□□□ 0.37
MSH6-203ENST00000420813 CCNB1P14635 433 aa17.36■□□□□ 0.37
MSH6-203ENST00000420813 LHCGRP22888 699 aa17.36■□□□□ 0.37
MSH6-203ENST00000420813 CFHR1Q03591 330 aa17.36■□□□□ 0.37
MSH6-203ENST00000420813 ZFP36L1Q07352 338 aaKnown RBP17.36■□□□□ 0.37
MSH6-203ENST00000420813 CLN3Q13286 438 aa17.36■□□□□ 0.37
MSH6-203ENST00000420813 TXNRD3NBQ6F5E7 133 aa17.36■□□□□ 0.37
MSH6-203ENST00000420813 INO80CQ6PI98 192 aaPredicted RBP17.36■□□□□ 0.37
MSH6-203ENST00000420813 USP45Q70EL2 814 aa17.36■□□□□ 0.37
MSH6-203ENST00000420813 SPRED1Q7Z699 444 aa17.36■□□□□ 0.37
MSH6-203ENST00000420813 HEATR4Q86WZ0 1026 aa17.36■□□□□ 0.37
MSH6-203ENST00000420813 TEX26Q8N6G2 289 aa17.36■□□□□ 0.37
MSH6-203ENST00000420813 GPBAR1Q8TDU6 330 aa17.36■□□□□ 0.37
MSH6-203ENST00000420813 IQCDQ96DY2 449 aa17.36■□□□□ 0.37
MSH6-203ENST00000420813 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.36■□□□□ 0.37
MSH6-203ENST00000420813 THAP2Q9H0W7 228 aa17.36■□□□□ 0.37
MSH6-203ENST00000420813 CARS2Q9HA77 564 aaKnown RBP17.36■□□□□ 0.37
MSH6-203ENST00000420813 TRNAU1APQ9NX07 287 aaKnown RBP17.36■□□□□ 0.37
MSH6-203ENST00000420813 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.36■□□□□ 0.37
MSH6-203ENST00000420813 LRIT1Q9P2V4 623 aa17.36■□□□□ 0.37
MSH6-203ENST00000420813 MOSPD1Q9UJG1 213 aa17.36■□□□□ 0.37
MSH6-203ENST00000420813 ANAPC7Q9UJX3 599 aa17.36■□□□□ 0.37
MSH6-203ENST00000420813 PPIL1Q9Y3C6 166 aa17.36■□□□□ 0.37
MSH6-203ENST00000420813 RNF215Q9Y6U7 377 aa17.36■□□□□ 0.37
MSH6-203ENST00000420813 NPIPB15A6NHN6 443 aaPredicted RBP17.35■□□□□ 0.37
MSH6-203ENST00000420813 B4DGG1 531 aa17.35■□□□□ 0.37
MSH6-203ENST00000420813 PGLSO95336 258 aa17.35■□□□□ 0.37
MSH6-203ENST00000420813 SERPING1P05155 500 aa17.35■□□□□ 0.37
MSH6-203ENST00000420813 CYP1A2P05177 515 aa17.35■□□□□ 0.37
MSH6-203ENST00000420813 CEACAM5P06731 702 aa17.35■□□□□ 0.37
MSH6-203ENST00000420813 SLC5A2P31639 672 aa17.35■□□□□ 0.37
MSH6-203ENST00000420813 PBX1P40424 430 aa17.35■□□□□ 0.37
MSH6-203ENST00000420813 MAXP61244 160 aa17.35■□□□□ 0.37
MSH6-203ENST00000420813 TPM4P67936 248 aa17.35■□□□□ 0.37
MSH6-203ENST00000420813 ZBED6P86452 979 aa17.35■□□□□ 0.37
MSH6-203ENST00000420813 CDK3Q00526 305 aa17.35■□□□□ 0.37
MSH6-203ENST00000420813 DPTQ07507 201 aa17.35■□□□□ 0.37
MSH6-203ENST00000420813 ILF3Q12906 894 aaKnown RBP eCLIP17.35■□□□□ 0.371e-6■■■□□ 16.2
MSH6-203ENST00000420813 ARHGEF7Q14155 803 aa17.35■□□□□ 0.37
MSH6-203ENST00000420813 ARMC12Q5T9G4 340 aa17.35■□□□□ 0.37
MSH6-203ENST00000420813 CCDC81Q6ZN84 652 aa17.35■□□□□ 0.37
MSH6-203ENST00000420813 HSD11B1LQ7Z5J1 315 aa17.35■□□□□ 0.37
MSH6-203ENST00000420813 C17orf82Q86X59 251 aaPredicted RBP17.35■□□□□ 0.37
MSH6-203ENST00000420813 Q8N9G6 341 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms