RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 BLOC1S5Q8TDH9 187 aa14.28□□□□□ -0.12
SHMT1P1-201ENST00000419974 PDCD6IPQ8WUM4 868 aaKnown RBP14.28□□□□□ -0.12
SHMT1P1-201ENST00000419974 FAM3CQ92520 227 aa14.28□□□□□ -0.12
SHMT1P1-201ENST00000419974 TLCD1Q96CP7 247 aa14.28□□□□□ -0.12
SHMT1P1-201ENST00000419974 CDKN2AIPNLQ96HQ2 116 aa14.28□□□□□ -0.12
SHMT1P1-201ENST00000419974 KLHL32Q96NJ5 620 aa14.28□□□□□ -0.12
SHMT1P1-201ENST00000419974 TRIM56Q9BRZ2 755 aaKnown RBP14.28□□□□□ -0.12
SHMT1P1-201ENST00000419974 FAM167BQ9BTA0 163 aa14.28□□□□□ -0.12
SHMT1P1-201ENST00000419974 ZFYVE1Q9HBF4 777 aa14.28□□□□□ -0.12
SHMT1P1-201ENST00000419974 ARL5AQ9Y689 179 aa14.28□□□□□ -0.12
SHMT1P1-201ENST00000419974 AGAP14A8MT82 685 aa14.27□□□□□ -0.12
SHMT1P1-201ENST00000419974 CXorf49A8MYA2 514 aaPredicted RBP14.27□□□□□ -0.12
SHMT1P1-201ENST00000419974 UPK3BL1B0FP48 263 aa14.27□□□□□ -0.12
SHMT1P1-201ENST00000419974 UPK3BL2E5RIL1 263 aa14.27□□□□□ -0.12
SHMT1P1-201ENST00000419974 EGFP01133 1207 aa14.27□□□□□ -0.12
SHMT1P1-201ENST00000419974 INHBAP08476 426 aa14.27□□□□□ -0.12
SHMT1P1-201ENST00000419974 CYP2A6P11509 494 aaPredicted RBP14.27□□□□□ -0.12
SHMT1P1-201ENST00000419974 GP5P40197 560 aa14.27□□□□□ -0.12
SHMT1P1-201ENST00000419974 STARD6P59095 220 aa14.27□□□□□ -0.12
SHMT1P1-201ENST00000419974 CCDC15Q0P6D6 951 aa14.27□□□□□ -0.12
SHMT1P1-201ENST00000419974 PON2Q15165 354 aa14.27□□□□□ -0.12
SHMT1P1-201ENST00000419974 MLF2Q15773 248 aaPredicted RBP14.27□□□□□ -0.12
SHMT1P1-201ENST00000419974 GRTP1Q5TC63 336 aa14.27□□□□□ -0.12
SHMT1P1-201ENST00000419974 SDE2Q6IQ49 451 aa14.27□□□□□ -0.12
SHMT1P1-201ENST00000419974 NEPROQ6NW34 567 aa14.27□□□□□ -0.12
SHMT1P1-201ENST00000419974 CRTC1Q6UUV9 634 aa14.27□□□□□ -0.12
SHMT1P1-201ENST00000419974 ZNF852Q6ZMS4 543 aa14.27□□□□□ -0.12
SHMT1P1-201ENST00000419974 STK40Q8N2I9 435 aa14.27□□□□□ -0.12
SHMT1P1-201ENST00000419974 C2CD4AQ8NCU7 369 aaPredicted RBP14.27□□□□□ -0.12
SHMT1P1-201ENST00000419974 PIP4K2CQ8TBX8 421 aa14.27□□□□□ -0.12
SHMT1P1-201ENST00000419974 EPS8L3Q8TE67 593 aaKnown RBP14.27□□□□□ -0.12
SHMT1P1-201ENST00000419974 MZB1Q8WU39 189 aa14.27□□□□□ -0.12
SHMT1P1-201ENST00000419974 ISL2Q96A47 359 aa14.27□□□□□ -0.12
SHMT1P1-201ENST00000419974 EID2BQ96D98 161 aa14.27□□□□□ -0.12
SHMT1P1-201ENST00000419974 ATP6V1G3Q96LB4 118 aa14.27□□□□□ -0.12
SHMT1P1-201ENST00000419974 TCF12Q99081 682 aa14.27□□□□□ -0.12
SHMT1P1-201ENST00000419974 NELL2Q99435 816 aa14.27□□□□□ -0.12
SHMT1P1-201ENST00000419974 RAD18Q9NS91 495 aa14.27□□□□□ -0.12
SHMT1P1-201ENST00000419974 C20orf96Q9NUD7 363 aaPredicted RBP14.27□□□□□ -0.12
SHMT1P1-201ENST00000419974 ZFATQ9P243 1243 aa14.27□□□□□ -0.12
SHMT1P1-201ENST00000419974 SLC2A6Q9UGQ3 507 aa14.27□□□□□ -0.12
SHMT1P1-201ENST00000419974 SCML1Q9UN30 329 aa14.27□□□□□ -0.12
SHMT1P1-201ENST00000419974 PKP3Q9Y446 797 aa14.27□□□□□ -0.12
SHMT1P1-201ENST00000419974 TICRRQ7Z2Z1 1910 aa14.27□□□□□ -0.13
SHMT1P1-201ENST00000419974 IQANK1A0A1B0GTG1 560 aa14.26□□□□□ -0.13
SHMT1P1-201ENST00000419974 C16orf96A6NNT2 1141 aa14.26□□□□□ -0.13
SHMT1P1-201ENST00000419974 CHURC1-FNTBB4DL54 471 aa14.26□□□□□ -0.13
SHMT1P1-201ENST00000419974 AURKAO14965 403 aa14.26□□□□□ -0.13
SHMT1P1-201ENST00000419974 AREL1O15033 823 aa14.26□□□□□ -0.13
SHMT1P1-201ENST00000419974 RGS16O15492 202 aaPredicted RBP14.26□□□□□ -0.13
SHMT1P1-201ENST00000419974 AP1G1O43747 822 aa14.26□□□□□ -0.13
SHMT1P1-201ENST00000419974 NARSO43776 548 aaKnown RBP14.26□□□□□ -0.13
SHMT1P1-201ENST00000419974 RNASEH1O60930 286 aaKnown RBP14.26□□□□□ -0.13
SHMT1P1-201ENST00000419974 KRT38O76015 456 aa14.26□□□□□ -0.13
SHMT1P1-201ENST00000419974 VAPBO95292 243 aa14.26□□□□□ -0.13
SHMT1P1-201ENST00000419974 ADH1BP00325 375 aa14.26□□□□□ -0.13
SHMT1P1-201ENST00000419974 EPHX1P07099 455 aa14.26□□□□□ -0.13
SHMT1P1-201ENST00000419974 OGNP20774 298 aaKnown RBP14.26□□□□□ -0.13
SHMT1P1-201ENST00000419974 C5AR1P21730 350 aa14.26□□□□□ -0.13
SHMT1P1-201ENST00000419974 AVPR2P30518 371 aa14.26□□□□□ -0.13
SHMT1P1-201ENST00000419974 VIPR1P32241 457 aa14.26□□□□□ -0.13
SHMT1P1-201ENST00000419974 SLC18A1P54219 525 aa14.26□□□□□ -0.13
SHMT1P1-201ENST00000419974 DCDC1P59894 354 aa14.26□□□□□ -0.13
SHMT1P1-201ENST00000419974 ELP6Q0PNE2 266 aa14.26□□□□□ -0.13
SHMT1P1-201ENST00000419974 SEPT6Q14141 434 aa14.26□□□□□ -0.13
SHMT1P1-201ENST00000419974 HSP90AA5PQ58FG0 334 aa14.26□□□□□ -0.13
SHMT1P1-201ENST00000419974 AFTPHQ6ULP2 937 aa14.26□□□□□ -0.13
SHMT1P1-201ENST00000419974 DPPA4Q7L190 304 aa14.26□□□□□ -0.13
SHMT1P1-201ENST00000419974 NLRP8Q86W28 1048 aa14.26□□□□□ -0.13
SHMT1P1-201ENST00000419974 OR2T3Q8NH03 318 aa14.26□□□□□ -0.13
SHMT1P1-201ENST00000419974 UHMK1Q8TAS1 419 aaKnown RBP14.26□□□□□ -0.13
SHMT1P1-201ENST00000419974 GRIN3AQ8TCU5 1115 aa14.26□□□□□ -0.13
SHMT1P1-201ENST00000419974 SHDQ96IW2 340 aa14.26□□□□□ -0.13
SHMT1P1-201ENST00000419974 PLEKHG4BQ96PX9 1271 aa14.26□□□□□ -0.13
SHMT1P1-201ENST00000419974 ACOX2Q99424 681 aa14.26□□□□□ -0.13
SHMT1P1-201ENST00000419974 SSU72Q9NP77 194 aaKnown RBP14.26□□□□□ -0.13
SHMT1P1-201ENST00000419974 CACNA2D2Q9NY47 1150 aa14.26□□□□□ -0.13
SHMT1P1-201ENST00000419974 APPL1Q9UKG1 709 aa14.26□□□□□ -0.13
SHMT1P1-201ENST00000419974 SARDHQ9UL12 918 aa14.26□□□□□ -0.13
SHMT1P1-201ENST00000419974 CORO1CQ9ULV4 474 aaPredicted RBP14.26□□□□□ -0.13
SHMT1P1-201ENST00000419974 MRPS17Q9Y2R5 130 aaKnown RBP14.26□□□□□ -0.13
SHMT1P1-201ENST00000419974 IKBKGQ9Y6K9 419 aa14.26□□□□□ -0.13
SHMT1P1-201ENST00000419974 A0A1W2PQF6 199 aa14.25□□□□□ -0.13
SHMT1P1-201ENST00000419974 NPIPB15A6NHN6 443 aaPredicted RBP14.25□□□□□ -0.13
SHMT1P1-201ENST00000419974 STX7O15400 261 aaKnown RBP14.25□□□□□ -0.13
SHMT1P1-201ENST00000419974 SYNCRIPO60506 623 aaKnown RBP14.25□□□□□ -0.13
SHMT1P1-201ENST00000419974 ADAM23O75077 832 aa14.25□□□□□ -0.13
SHMT1P1-201ENST00000419974 KRT37O76014 449 aa14.25□□□□□ -0.13
SHMT1P1-201ENST00000419974 ERVK-10P10266 1014 aa14.25□□□□□ -0.13
SHMT1P1-201ENST00000419974 HLA-EP13747 358 aa14.25□□□□□ -0.13
SHMT1P1-201ENST00000419974 HOXD11P31277 338 aaPredicted RBP14.25□□□□□ -0.13
SHMT1P1-201ENST00000419974 MMP12P39900 470 aa14.25□□□□□ -0.13
SHMT1P1-201ENST00000419974 ABL2P42684 1182 aa14.25□□□□□ -0.13
SHMT1P1-201ENST00000419974 LEPRP48357 1165 aaKnown RBP14.25□□□□□ -0.13
SHMT1P1-201ENST00000419974 ARSDP51689 593 aa14.25□□□□□ -0.13
SHMT1P1-201ENST00000419974 STC1P52823 247 aa14.25□□□□□ -0.13
SHMT1P1-201ENST00000419974 COPAP53621 1224 aa14.25□□□□□ -0.13
SHMT1P1-201ENST00000419974 ADARP55265 1226 aaKnown RBP14.25□□□□□ -0.13
SHMT1P1-201ENST00000419974 PRAMEP78395 509 aa14.25□□□□□ -0.13
SHMT1P1-201ENST00000419974 XIAPP98170 497 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms