RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 ISCA2Q86U28 154 aa11.91□□□□□ -0.5
LIMK1-202ENST00000418310 ZNF280BQ86YH2 543 aa11.91□□□□□ -0.5
LIMK1-202ENST00000418310 THEM5Q8N1Q8 247 aa11.91□□□□□ -0.5
LIMK1-202ENST00000418310 KLHDC9Q8NEP7 349 aa11.91□□□□□ -0.5
LIMK1-202ENST00000418310 TSPAN14Q8NG11 270 aa11.91□□□□□ -0.5
LIMK1-202ENST00000418310 GTF3C2Q8WUA4 911 aaPredicted RBP11.91□□□□□ -0.5
LIMK1-202ENST00000418310 CYGBQ8WWM9 190 aa11.91□□□□□ -0.5
LIMK1-202ENST00000418310 ABTB1Q969K4 478 aaPredicted RBP11.91□□□□□ -0.5
LIMK1-202ENST00000418310 ACBD6Q9BR61 282 aa11.91□□□□□ -0.5
LIMK1-202ENST00000418310 CSNK1G1Q9HCP0 422 aa11.91□□□□□ -0.5
LIMK1-202ENST00000418310 TBC1D13Q9NVG8 400 aa11.91□□□□□ -0.5
LIMK1-202ENST00000418310 RHBDL2Q9NX52 303 aa11.91□□□□□ -0.5
LIMK1-202ENST00000418310 DNAJC15Q9Y5T4 150 aa11.91□□□□□ -0.5
LIMK1-202ENST00000418310 AP3B1O00203 1094 aa11.9□□□□□ -0.5
LIMK1-202ENST00000418310 ENPP3O14638 875 aa11.9□□□□□ -0.5
LIMK1-202ENST00000418310 HGFP14210 728 aa11.9□□□□□ -0.5
LIMK1-202ENST00000418310 TBX4P57082 545 aa11.9□□□□□ -0.5
LIMK1-202ENST00000418310 OR4D1Q15615 310 aa11.9□□□□□ -0.5
LIMK1-202ENST00000418310 LRRC23Q53EV4 343 aaPredicted RBP11.9□□□□□ -0.5
LIMK1-202ENST00000418310 UNC50Q53HI1 259 aa11.9□□□□□ -0.5
LIMK1-202ENST00000418310 RABL3Q5HYI8 236 aa11.9□□□□□ -0.5
LIMK1-202ENST00000418310 TIGD7Q6NT04 549 aaPredicted RBP11.9□□□□□ -0.5
LIMK1-202ENST00000418310 FUNDC1Q8IVP5 155 aa11.9□□□□□ -0.5
LIMK1-202ENST00000418310 CBR4Q8N4T8 237 aa11.9□□□□□ -0.5
LIMK1-202ENST00000418310 DLG3Q92796 817 aa11.9□□□□□ -0.5
LIMK1-202ENST00000418310 MAELQ96JY0 434 aaKnown RBP11.9□□□□□ -0.5
LIMK1-202ENST00000418310 ANGPT2O15123 496 aa11.9□□□□□ -0.5
LIMK1-202ENST00000418310 INPP4BO15327 924 aa11.9□□□□□ -0.5
LIMK1-202ENST00000418310 PYGLP06737 847 aa11.9□□□□□ -0.5
LIMK1-202ENST00000418310 RBP1P09455 135 aa11.9□□□□□ -0.5
LIMK1-202ENST00000418310 SLC2A3P11169 496 aa11.9□□□□□ -0.5
LIMK1-202ENST00000418310 CAPN3P20807 821 aa11.9□□□□□ -0.5
LIMK1-202ENST00000418310 PRDX3P30048 256 aaKnown RBP11.9□□□□□ -0.5
LIMK1-202ENST00000418310 C6orf10Q5SRN2 563 aa11.9□□□□□ -0.5
LIMK1-202ENST00000418310 ZNF678Q5SXM1 525 aa11.9□□□□□ -0.5
LIMK1-202ENST00000418310 CHST15Q7LFX5 561 aaPredicted RBP11.9□□□□□ -0.5
LIMK1-202ENST00000418310 PGBD5Q8N414 524 aa11.9□□□□□ -0.5
LIMK1-202ENST00000418310 CATSPER1Q8NEC5 780 aa11.9□□□□□ -0.5
LIMK1-202ENST00000418310 TWIST2Q8WVJ9 160 aa11.9□□□□□ -0.5
LIMK1-202ENST00000418310 HAPLN3Q96S86 360 aa11.9□□□□□ -0.5
LIMK1-202ENST00000418310 ACOX2Q99424 681 aa11.9□□□□□ -0.5
LIMK1-202ENST00000418310 SEPHS2Q99611 448 aa11.9□□□□□ -0.5
LIMK1-202ENST00000418310 UPF3AQ9H1J1 476 aaKnown RBP11.9□□□□□ -0.5
LIMK1-202ENST00000418310 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.9□□□□□ -0.5
LIMK1-202ENST00000418310 RALGAPA2Q2PPJ7 1873 aa11.9□□□□□ -0.5
LIMK1-202ENST00000418310 MKI67P46013 3256 aaKnown RBP11.9□□□□□ -0.5
LIMK1-202ENST00000418310 TSC2P49815 1807 aa11.9□□□□□ -0.5
LIMK1-202ENST00000418310 CCDC162PA2VCL2 907 aa11.9□□□□□ -0.51
LIMK1-202ENST00000418310 MUSKO15146 869 aa11.9□□□□□ -0.51
LIMK1-202ENST00000418310 FGF10O15520 208 aaPredicted RBP11.9□□□□□ -0.51
LIMK1-202ENST00000418310 PBX3P40426 434 aa11.9□□□□□ -0.51
LIMK1-202ENST00000418310 CDKN1CP49918 316 aaPredicted RBP11.9□□□□□ -0.51
LIMK1-202ENST00000418310 AGTR2P50052 363 aa11.9□□□□□ -0.51
LIMK1-202ENST00000418310 RENBPP51606 427 aa11.9□□□□□ -0.51
LIMK1-202ENST00000418310 CLCN5P51795 746 aa11.9□□□□□ -0.51
LIMK1-202ENST00000418310 RHDQ02161 417 aa11.9□□□□□ -0.51
LIMK1-202ENST00000418310 HERC3Q15034 1050 aa11.9□□□□□ -0.51
LIMK1-202ENST00000418310 C10orf120Q5SQS8 335 aa11.9□□□□□ -0.51
LIMK1-202ENST00000418310 TAF2Q6P1X5 1199 aa11.9□□□□□ -0.51
LIMK1-202ENST00000418310 B3GNT6Q6ZMB0 384 aa11.9□□□□□ -0.51
LIMK1-202ENST00000418310 ANKRD23Q86SG2 305 aa11.9□□□□□ -0.51
LIMK1-202ENST00000418310 TICAM1Q8IUC6 712 aa11.9□□□□□ -0.51
LIMK1-202ENST00000418310 CPNE9Q8IYJ1 553 aa11.9□□□□□ -0.51
LIMK1-202ENST00000418310 EZH1Q92800 747 aaPredicted RBP11.9□□□□□ -0.51
LIMK1-202ENST00000418310 RMDN1Q96DB5 314 aa11.9□□□□□ -0.51
LIMK1-202ENST00000418310 TMEM74Q96NL1 305 aa11.9□□□□□ -0.51
LIMK1-202ENST00000418310 SLC25A23Q9BV35 468 aa11.9□□□□□ -0.51
LIMK1-202ENST00000418310 KATNAL1Q9BW62 490 aa11.9□□□□□ -0.51
LIMK1-202ENST00000418310 MRPS26Q9BYN8 205 aaKnown RBP11.9□□□□□ -0.51
LIMK1-202ENST00000418310 SENP6Q9GZR1 1112 aaPredicted RBP11.9□□□□□ -0.51
LIMK1-202ENST00000418310 SLC25A51Q9H1U9 297 aa11.9□□□□□ -0.51
LIMK1-202ENST00000418310 BPIFA1Q9NP55 256 aa11.9□□□□□ -0.51
LIMK1-202ENST00000418310 COMMD10Q9Y6G5 202 aa11.9□□□□□ -0.51
LIMK1-202ENST00000418310 SLC12A8A0AV02 714 aa11.89□□□□□ -0.51
LIMK1-202ENST00000418310 NME4O00746 187 aa11.89□□□□□ -0.51
LIMK1-202ENST00000418310 TNPO2O14787 897 aaKnown RBP11.89□□□□□ -0.51
LIMK1-202ENST00000418310 CDK14O94921 469 aa11.89□□□□□ -0.51
LIMK1-202ENST00000418310 S1PR4O95977 384 aa11.89□□□□□ -0.51
LIMK1-202ENST00000418310 OXTRP30559 389 aa11.89□□□□□ -0.51
LIMK1-202ENST00000418310 OR1E1P30953 314 aa11.89□□□□□ -0.51
LIMK1-202ENST00000418310 RGS2P41220 211 aa11.89□□□□□ -0.51
LIMK1-202ENST00000418310 YAP1P46937 504 aaKnown RBP11.89□□□□□ -0.51
LIMK1-202ENST00000418310 MLLT6P55198 1093 aaPredicted RBP11.89□□□□□ -0.51
LIMK1-202ENST00000418310 TRIM32Q13049 653 aa11.89□□□□□ -0.51
LIMK1-202ENST00000418310 ZNF235Q14590 738 aa11.89□□□□□ -0.51
LIMK1-202ENST00000418310 MS4A13Q5J8X5 152 aa11.89□□□□□ -0.51
LIMK1-202ENST00000418310 FAM171BQ6P995 826 aa11.89□□□□□ -0.51
LIMK1-202ENST00000418310 ZNF549Q6P9A3 640 aa11.89□□□□□ -0.51
LIMK1-202ENST00000418310 CHSY3Q70JA7 882 aa11.89□□□□□ -0.51
LIMK1-202ENST00000418310 EFHBQ8N7U6 833 aa11.89□□□□□ -0.51
LIMK1-202ENST00000418310 CALML6Q8TD86 181 aa11.89□□□□□ -0.51
LIMK1-202ENST00000418310 BHMTQ93088 406 aa11.89□□□□□ -0.51
LIMK1-202ENST00000418310 CDK15Q96Q40 435 aa11.89□□□□□ -0.51
LIMK1-202ENST00000418310 SEPT5Q99719 369 aaPredicted RBP11.89□□□□□ -0.51
LIMK1-202ENST00000418310 MEAF6Q9HAF1 191 aa11.89□□□□□ -0.51
LIMK1-202ENST00000418310 EVLQ9UI08 416 aaPredicted RBP11.89□□□□□ -0.51
LIMK1-202ENST00000418310 TBC1D30Q9Y2I9 924 aa11.89□□□□□ -0.51
LIMK1-202ENST00000418310 PRRC2BQ5JSZ5 2229 aaKnown RBP11.89□□□□□ -0.51
LIMK1-202ENST00000418310 TMX2-CTNND1H3BSU7 103 aa11.89□□□□□ -0.51
LIMK1-202ENST00000418310 RHOBTB1O94844 696 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms