RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 CACUL1Q86Y37 369 aa15.56■□□□□ 0.08
SHMT2-202ENST00000414700 PAF1Q8N7H5 531 aa15.56■□□□□ 0.08
SHMT2-202ENST00000414700 IL17RCQ8NAC3 791 aa15.56■□□□□ 0.08
SHMT2-202ENST00000414700 FBF1Q8TES7 1133 aa15.56■□□□□ 0.08
SHMT2-202ENST00000414700 ZNF669Q96BR6 464 aaPredicted RBP15.56■□□□□ 0.08
SHMT2-202ENST00000414700 TTC25Q96NG3 672 aa15.56■□□□□ 0.08
SHMT2-202ENST00000414700 ELAC2Q9BQ52 826 aaKnown RBP15.56■□□□□ 0.08
SHMT2-202ENST00000414700 KIFC1Q9BW19 673 aa15.56■□□□□ 0.08
SHMT2-202ENST00000414700 POLR3BQ9NW08 1133 aaPredicted RBP15.56■□□□□ 0.08
SHMT2-202ENST00000414700 NDRG2Q9UN36 371 aaKnown RBP15.56■□□□□ 0.08
SHMT2-202ENST00000414700 TCAF1Q9Y4C2 921 aa15.56■□□□□ 0.08
SHMT2-202ENST00000414700 A8MX80 341 aa15.56■□□□□ 0.08
SHMT2-202ENST00000414700 AP3B1O00203 1094 aa15.56■□□□□ 0.08
SHMT2-202ENST00000414700 CCL22O00626 93 aa15.56■□□□□ 0.08
SHMT2-202ENST00000414700 LDB2O43679 373 aa15.56■□□□□ 0.08
SHMT2-202ENST00000414700 ADAM23O75077 832 aa15.56■□□□□ 0.08
SHMT2-202ENST00000414700 C1QAP02745 245 aa15.56■□□□□ 0.08
SHMT2-202ENST00000414700 NUDT17P0C025 328 aa15.56■□□□□ 0.08
SHMT2-202ENST00000414700 PGAM1P18669 254 aa15.56■□□□□ 0.08
SHMT2-202ENST00000414700 DRD1P21728 446 aa15.56■□□□□ 0.08
SHMT2-202ENST00000414700 KCNJ2P63252 427 aa15.56■□□□□ 0.08
SHMT2-202ENST00000414700 CCINQ13939 588 aa15.56■□□□□ 0.08
SHMT2-202ENST00000414700 KIAA1211LQ6NV74 962 aa15.56■□□□□ 0.08
SHMT2-202ENST00000414700 ESRP1Q6NXG1 681 aaKnown RBP15.56■□□□□ 0.08
SHMT2-202ENST00000414700 TEX9Q8N6V9 391 aa15.56■□□□□ 0.08
SHMT2-202ENST00000414700 ABCF3Q9NUQ8 709 aa15.56■□□□□ 0.08
SHMT2-202ENST00000414700 SORCS3Q9UPU3 1222 aa15.56■□□□□ 0.08
SHMT2-202ENST00000414700 BDP1A6H8Y1 2624 aa15.56■□□□□ 0.08
SHMT2-202ENST00000414700 A0A0J9YYE9 177 aa15.55■□□□□ 0.08
SHMT2-202ENST00000414700 ZCWPW2A0A1B0GU75 182 aa15.55■□□□□ 0.08
SHMT2-202ENST00000414700 C19orf67A6NJJ6 358 aa15.55■□□□□ 0.08
SHMT2-202ENST00000414700 UBOX5O94941 541 aa15.55■□□□□ 0.08
SHMT2-202ENST00000414700 TRBC1P01850 177 aa15.55■□□□□ 0.08
SHMT2-202ENST00000414700 LINGO3P0C6S8 592 aa15.55■□□□□ 0.08
SHMT2-202ENST00000414700 GLULP15104 373 aa15.55■□□□□ 0.08
SHMT2-202ENST00000414700 CA4P22748 312 aa15.55■□□□□ 0.08
SHMT2-202ENST00000414700 ADRA1DP25100 572 aa15.55■□□□□ 0.08
SHMT2-202ENST00000414700 GRIA4P48058 902 aa15.55■□□□□ 0.08
SHMT2-202ENST00000414700 ELAVL3Q14576 367 aaKnown RBP15.55■□□□□ 0.08
SHMT2-202ENST00000414700 MLF2Q15773 248 aaPredicted RBP15.55■□□□□ 0.08
SHMT2-202ENST00000414700 GALNTL6Q49A17 601 aa15.55■□□□□ 0.08
SHMT2-202ENST00000414700 ANKRD20A4Q4UJ75 823 aa15.55■□□□□ 0.08
SHMT2-202ENST00000414700 STEAP4Q687X5 459 aa15.55■□□□□ 0.08
SHMT2-202ENST00000414700 PKN3Q6P5Z2 889 aa15.55■□□□□ 0.08
SHMT2-202ENST00000414700 GBP7Q8N8V2 638 aaPredicted RBP15.55■□□□□ 0.08
SHMT2-202ENST00000414700 TXNDC5Q8NBS9 432 aaKnown RBP15.55■□□□□ 0.08
SHMT2-202ENST00000414700 EID2BQ96D98 161 aa15.55■□□□□ 0.08
SHMT2-202ENST00000414700 ZNF641Q96N77 438 aaPredicted RBP15.55■□□□□ 0.08
SHMT2-202ENST00000414700 YIPF3Q9GZM5 350 aa15.55■□□□□ 0.08
SHMT2-202ENST00000414700 CD320Q9NPF0 282 aa15.55■□□□□ 0.08
SHMT2-202ENST00000414700 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.55■□□□□ 0.085e-12■■□□□ 11.4
SHMT2-202ENST00000414700 ZFATQ9P243 1243 aa15.55■□□□□ 0.08
SHMT2-202ENST00000414700 SLC17A6Q9P2U8 582 aa15.55■□□□□ 0.08
SHMT2-202ENST00000414700 RABGEF1Q9UJ41 708 aa15.55■□□□□ 0.08
SHMT2-202ENST00000414700 FAM237BA0A1B0GVD1 139 aa15.55■□□□□ 0.08
SHMT2-202ENST00000414700 KRBA1A5PL33 1030 aa15.55■□□□□ 0.08
SHMT2-202ENST00000414700 MROH6A6NGR9 719 aa15.55■□□□□ 0.08
SHMT2-202ENST00000414700 GOLGA8TH3BQL2 631 aa15.55■□□□□ 0.08
SHMT2-202ENST00000414700 PLK4O00444 970 aa15.55■□□□□ 0.08
SHMT2-202ENST00000414700 KPNA3O00505 521 aaPredicted RBP15.55■□□□□ 0.08
SHMT2-202ENST00000414700 WFS1O76024 890 aa15.55■□□□□ 0.08
SHMT2-202ENST00000414700 POLBP06746 335 aa15.55■□□□□ 0.08
SHMT2-202ENST00000414700 NEFHP12036 1026 aa15.55■□□□□ 0.08
SHMT2-202ENST00000414700 NUMA1Q14980 2115 aa15.55■□□□□ 0.08
SHMT2-202ENST00000414700 CNGA3Q16281 694 aa15.55■□□□□ 0.08
SHMT2-202ENST00000414700 MMAAQ8IVH4 418 aaKnown RBP15.55■□□□□ 0.08
SHMT2-202ENST00000414700 PPHLN1Q8NEY8 458 aaKnown RBP15.55■□□□□ 0.08
SHMT2-202ENST00000414700 OR13J1Q8NGT2 312 aa15.55■□□□□ 0.08
SHMT2-202ENST00000414700 GSDMBQ8TAX9 411 aa15.55■□□□□ 0.08
SHMT2-202ENST00000414700 BRSK1Q8TDC3 778 aa15.55■□□□□ 0.08
SHMT2-202ENST00000414700 SMYD2Q9NRG4 433 aa15.55■□□□□ 0.08
SHMT2-202ENST00000414700 INTS9Q9NV88 658 aaKnown RBP15.55■□□□□ 0.08
SHMT2-202ENST00000414700 PPM1HQ9ULR3 514 aa15.55■□□□□ 0.08
SHMT2-202ENST00000414700 SCN8AQ9UQD0 1980 aa15.54■□□□□ 0.08
SHMT2-202ENST00000414700 NPIPB15A6NHN6 443 aaPredicted RBP15.54■□□□□ 0.08
SHMT2-202ENST00000414700 CXorf49A8MYA2 514 aaPredicted RBP15.54■□□□□ 0.08
SHMT2-202ENST00000414700 USP1O94782 785 aa15.54■□□□□ 0.08
SHMT2-202ENST00000414700 KLF8O95600 359 aaPredicted RBP15.54■□□□□ 0.08
SHMT2-202ENST00000414700 IL1BP01584 269 aa15.54■□□□□ 0.08
SHMT2-202ENST00000414700 VIMP08670 466 aaKnown RBP15.54■□□□□ 0.08
SHMT2-202ENST00000414700 F7P08709 466 aaPredicted RBP15.54■□□□□ 0.08
SHMT2-202ENST00000414700 ABHD2P08910 425 aa15.54■□□□□ 0.08
SHMT2-202ENST00000414700 ARNTP27540 789 aa15.54■□□□□ 0.08
SHMT2-202ENST00000414700 HNF1BP35680 557 aa15.54■□□□□ 0.08
SHMT2-202ENST00000414700 GRM3Q14832 879 aa15.54■□□□□ 0.08
SHMT2-202ENST00000414700 LONRF1Q17RB8 773 aa15.54■□□□□ 0.08
SHMT2-202ENST00000414700 KBTBD12Q3ZCT8 623 aa15.54■□□□□ 0.08
SHMT2-202ENST00000414700 GLT6D1Q7Z4J2 308 aa15.54■□□□□ 0.08
SHMT2-202ENST00000414700 CROCCP2Q86T23 111 aa15.54■□□□□ 0.08
SHMT2-202ENST00000414700 TSPAN33Q86UF1 283 aa15.54■□□□□ 0.08
SHMT2-202ENST00000414700 APLFQ8IW19 511 aaPredicted RBP15.54■□□□□ 0.08
SHMT2-202ENST00000414700 OR13C4Q8NGS5 318 aa15.54■□□□□ 0.08
SHMT2-202ENST00000414700 PIP4K2CQ8TBX8 421 aa15.54■□□□□ 0.08
SHMT2-202ENST00000414700 EPS8L3Q8TE67 593 aaKnown RBP15.54■□□□□ 0.08
SHMT2-202ENST00000414700 OR8D1Q8WZ84 308 aa15.54■□□□□ 0.08
SHMT2-202ENST00000414700 MRRFQ96E11 262 aaKnown RBP15.54■□□□□ 0.08
SHMT2-202ENST00000414700 NAT9Q9BTE0 207 aa15.54■□□□□ 0.08
SHMT2-202ENST00000414700 ARHGEF3Q9NR81 526 aa15.54■□□□□ 0.08
SHMT2-202ENST00000414700 TREX1Q9NSU2 369 aa15.54■□□□□ 0.08
SHMT2-202ENST00000414700 MTF2Q9Y483 593 aaPredicted RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms