RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 TSC22D1Q15714 1073 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 BAK1Q16611 211 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 KYAT1Q16773 422 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 FAM187BQ17R55 369 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 MTHFSDQ2M296 383 aaKnown RBP3.66□□□□□ -1.82
SF3B1-203ENST00000414174 PGS1Q32NB8 556 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 MCMDC2Q4G0Z9 681 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 TMEM119Q4V9L6 283 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 SLC44A4Q53GD3 710 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 SGO1Q5FBB7 561 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 DAB2IPQ5VWQ8 1189 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 NAA35Q5VZE5 725 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 KRT80Q6KB66 452 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 HEPHL1Q6MZM0 1159 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 FBXO38Q6PIJ6 1188 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 AFTPHQ6ULP2 937 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 MFSD7Q6UXD7 560 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 ZNF365Q70YC5 407 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 HTR3DQ70Z44 454 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 ANO5Q75V66 913 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 BHLHA15Q7RTS1 189 aaPredicted RBP3.66□□□□□ -1.82
SF3B1-203ENST00000414174 PLPPR4Q7Z2D5 763 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 CAMKMTQ7Z624 323 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 ZNF554Q86TJ5 538 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 MIB1Q86YT6 1006 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 CCDC36Q8IYA8 594 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 DIS3L2Q8IYB7 885 aaKnown RBP3.66□□□□□ -1.82
SF3B1-203ENST00000414174 PM20D2Q8IYS1 436 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 ULK2Q8IYT8 1036 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 C17orf53Q8N3J3 647 aaPredicted RBP3.66□□□□□ -1.82
SF3B1-203ENST00000414174 ZNF781Q8N8C0 355 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 TMEM145Q8NBT3 493 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 CHST14Q8NCH0 376 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 RCBTB1Q8NDN9 531 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 CCDC112Q8NEF3 446 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 ADCY4Q8NFM4 1077 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 OR6J1Q8NGC5 347 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 AKR7LQ8NHP1 331 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 SETD6Q8TBK2 473 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 FAM71BQ8TC56 605 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 KCNG4Q8TDN1 519 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 ADAMTS16Q8TE57 1224 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 HEXDCQ8WVB3 486 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 DPF1Q92782 380 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 SLC5A5Q92911 643 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 FBXO32Q969P5 355 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 SLC25A36Q96CQ1 311 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 FAM227BQ96M60 508 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 ZNF558Q96NG5 402 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 PTCHD1Q96NR3 888 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 ANKRD27Q96NW4 1050 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 INPP4AQ96PE3 977 aaPredicted RBP3.66□□□□□ -1.82
SF3B1-203ENST00000414174 MED15Q96RN5 788 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 DHRS9Q9BPW9 319 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 HEPHQ9BQS7 1158 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 ZSCAN5AQ9BUG6 496 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 APOL6Q9BWW8 343 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 TBC1D10AQ9BXI6 508 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 TDRD1Q9BXT4 1180 aaKnown RBP3.66□□□□□ -1.82
SF3B1-203ENST00000414174 MRPL1Q9BYD6 325 aaKnown RBP3.66□□□□□ -1.82
SF3B1-203ENST00000414174 PANK2Q9BZ23 570 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 NDEL1Q9GZM8 345 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 SLC5A7Q9GZV3 580 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 HDHD2Q9H0R4 259 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 LRMDAQ9H2I8 198 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 CUEDC2Q9H467 287 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 ST6GALNAC4Q9H4F1 302 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 DHX33Q9H6R0 707 aaKnown RBP3.66□□□□□ -1.82
SF3B1-203ENST00000414174 MRPS30Q9NP92 439 aaKnown RBP3.66□□□□□ -1.82
SF3B1-203ENST00000414174 PFDN4Q9NQP4 134 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 CNGB3Q9NQW8 809 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 INIPQ9NRY2 104 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 KCNH7Q9NS40 1196 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 TMEM140Q9NV12 185 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 ARMC1Q9NVT9 282 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 ARHGEF38Q9NXL2 777 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 DNAJB4Q9UDY4 337 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 AFF4Q9UHB7 1163 aaKnown RBP3.66□□□□□ -1.82
SF3B1-203ENST00000414174 ZNHIT2Q9UHR6 403 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 OGDHLQ9ULD0 1010 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 ZKSCAN5Q9Y2L8 839 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 FAM32AQ9Y421 112 aaKnown RBP3.66□□□□□ -1.82
SF3B1-203ENST00000414174 PCDHA3Q9Y5H8 950 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 BACE2Q9Y5Z0 518 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 KIF27Q86VH2 1401 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 ACEP12821 1306 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 AQP12BA6NM10 295 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 SRRM3A6NNA2 597 aaPredicted RBP3.65□□□□□ -1.83
SF3B1-203ENST00000414174 SYCE1LA8MT33 242 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 MIF4GDA9UHW6 222 aaKnown RBP3.65□□□□□ -1.83
SF3B1-203ENST00000414174 ERVV-1B6SEH8 477 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 PSMD11O00231 422 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 WRBO00258 174 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 MAP2K7O14733 419 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 HNRNPDLO14979 420 aaKnown RBP3.65□□□□□ -1.83
SF3B1-203ENST00000414174 POLR1CO15160 346 aaPredicted RBP3.65□□□□□ -1.83
SF3B1-203ENST00000414174 LRRTM2O43300 516 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 SSX5O60225 188 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 PPP1R11O60927 126 aaPredicted RBP3.65□□□□□ -1.83
SF3B1-203ENST00000414174 TRIM3O75382 744 aaPredicted RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms