RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 BRD8Q9H0E9 1235 aa14.83□□□□□ -0.04
LIMS4-201ENST00000413601 PCDH9Q9HC56 1237 aa14.83□□□□□ -0.04
LIMS4-201ENST00000413601 SPASTQ9UBP0 616 aa14.83□□□□□ -0.04
LIMS4-201ENST00000413601 TRIM10Q9UDY6 481 aa14.83□□□□□ -0.04
LIMS4-201ENST00000413601 PCDHGA1Q9Y5H4 931 aa14.83□□□□□ -0.04
LIMS4-201ENST00000413601 PCDHA3Q9Y5H8 950 aa14.83□□□□□ -0.04
LIMS4-201ENST00000413601 CSNK1G3Q9Y6M4 447 aa14.83□□□□□ -0.04
LIMS4-201ENST00000413601 ZFC3H1O60293 1989 aaKnown RBP14.82□□□□□ -0.04
LIMS4-201ENST00000413601 GRID2IPA4D2P6 1211 aa14.82□□□□□ -0.04
LIMS4-201ENST00000413601 FAM149AA5PLN7 773 aa14.82□□□□□ -0.04
LIMS4-201ENST00000413601 C1SP09871 688 aa14.82□□□□□ -0.04
LIMS4-201ENST00000413601 ACP1P24666 158 aa14.82□□□□□ -0.04
LIMS4-201ENST00000413601 CTNNA1P35221 906 aaKnown RBP14.82□□□□□ -0.04
LIMS4-201ENST00000413601 TRIM23P36406 574 aa14.82□□□□□ -0.04
LIMS4-201ENST00000413601 HK3P52790 923 aa14.82□□□□□ -0.04
LIMS4-201ENST00000413601 SRP54P61011 504 aaKnown RBP14.82□□□□□ -0.04
LIMS4-201ENST00000413601 DAB2P98082 770 aa14.82□□□□□ -0.04
LIMS4-201ENST00000413601 PRKD1Q15139 912 aaPredicted RBP14.82□□□□□ -0.04
LIMS4-201ENST00000413601 TCEA2Q15560 299 aa14.82□□□□□ -0.04
LIMS4-201ENST00000413601 ALG11Q2TAA5 492 aa14.82□□□□□ -0.04
LIMS4-201ENST00000413601 LRRC66Q68CR7 880 aa14.82□□□□□ -0.04
LIMS4-201ENST00000413601 KCTD16Q68DU8 428 aa14.82□□□□□ -0.04
LIMS4-201ENST00000413601 ESRP1Q6NXG1 681 aaKnown RBP14.82□□□□□ -0.04
LIMS4-201ENST00000413601 CRTC1Q6UUV9 634 aa14.82□□□□□ -0.04
LIMS4-201ENST00000413601 RFLNAQ6ZTI6 216 aa14.82□□□□□ -0.04
LIMS4-201ENST00000413601 Q6ZVL8 140 aa14.82□□□□□ -0.04
LIMS4-201ENST00000413601 BZW1Q7L1Q6 419 aaKnown RBP14.82□□□□□ -0.04
LIMS4-201ENST00000413601 ZC3H18Q86VM9 953 aaKnown RBP14.82□□□□□ -0.04
LIMS4-201ENST00000413601 TFB1MQ8WVM0 346 aaKnown RBP14.82□□□□□ -0.04
LIMS4-201ENST00000413601 P3H4Q92791 437 aa14.82□□□□□ -0.04
LIMS4-201ENST00000413601 HAUS1Q96CS2 278 aa14.82□□□□□ -0.04
LIMS4-201ENST00000413601 DTD2Q96FN9 168 aa14.82□□□□□ -0.04
LIMS4-201ENST00000413601 RBM15Q96T37 977 aaKnown RBP eCLIP14.82□□□□□ -0.04
LIMS4-201ENST00000413601 DUSP23Q9BVJ7 150 aa14.82□□□□□ -0.04
LIMS4-201ENST00000413601 LGR4Q9BXB1 951 aa14.82□□□□□ -0.04
LIMS4-201ENST00000413601 CLPBQ9H078 707 aa14.82□□□□□ -0.04
LIMS4-201ENST00000413601 KLQ9UEF7 1012 aa14.82□□□□□ -0.04
LIMS4-201ENST00000413601 AKAP13Q12802 2813 aa14.81□□□□□ -0.04
LIMS4-201ENST00000413601 MACROD2A1Z1Q3 448 aa14.81□□□□□ -0.04
LIMS4-201ENST00000413601 GOLGA6CA6NDK9 693 aa14.81□□□□□ -0.04
LIMS4-201ENST00000413601 GOLGA6BA6NDN3 693 aa14.81□□□□□ -0.04
LIMS4-201ENST00000413601 TMEM202A6NGA9 273 aa14.81□□□□□ -0.04
LIMS4-201ENST00000413601 CAPN8A6NHC0 703 aa14.81□□□□□ -0.04
LIMS4-201ENST00000413601 GOLGA6L6A8MZA4 724 aa14.81□□□□□ -0.04
LIMS4-201ENST00000413601 PSMD11O00231 422 aa14.81□□□□□ -0.04
LIMS4-201ENST00000413601 CACNB4O00305 520 aaPredicted RBP14.81□□□□□ -0.04
LIMS4-201ENST00000413601 RASGRP1O95267 797 aa14.81□□□□□ -0.04
LIMS4-201ENST00000413601 CELA2BP08218 269 aaPredicted RBP14.81□□□□□ -0.04
LIMS4-201ENST00000413601 GOLGA6DP0CG33 693 aa14.81□□□□□ -0.04
LIMS4-201ENST00000413601 TSHRP16473 764 aa14.81□□□□□ -0.04
LIMS4-201ENST00000413601 PTPN3P26045 913 aa14.81□□□□□ -0.04
LIMS4-201ENST00000413601 BLKP51451 505 aa14.81□□□□□ -0.04
LIMS4-201ENST00000413601 CLDN6P56747 220 aa14.81□□□□□ -0.04
LIMS4-201ENST00000413601 KIAA1024LP59773 190 aa14.81□□□□□ -0.04
LIMS4-201ENST00000413601 RPL26P61254 145 aaKnown RBP14.81□□□□□ -0.04
LIMS4-201ENST00000413601 PTSQ03393 145 aa14.81□□□□□ -0.04
LIMS4-201ENST00000413601 SMAD1Q15797 465 aaKnown RBP14.81□□□□□ -0.04
LIMS4-201ENST00000413601 PPP2R5EQ16537 467 aa14.81□□□□□ -0.04
LIMS4-201ENST00000413601 TEX44Q53QW1 395 aa14.81□□□□□ -0.04
LIMS4-201ENST00000413601 CCNI2Q6ZMN8 369 aaPredicted RBP14.81□□□□□ -0.04
LIMS4-201ENST00000413601 KDELC2Q7Z4H8 507 aa14.81□□□□□ -0.04
LIMS4-201ENST00000413601 NT5DC3Q86UY8 548 aa14.81□□□□□ -0.04
LIMS4-201ENST00000413601 GALNT15Q8N3T1 639 aa14.81□□□□□ -0.04
LIMS4-201ENST00000413601 LRRC57Q8N9N7 239 aa14.81□□□□□ -0.04
LIMS4-201ENST00000413601 ATL2Q8NHH9 583 aa14.81□□□□□ -0.04
LIMS4-201ENST00000413601 IMP4Q96G21 291 aaKnown RBP14.81□□□□□ -0.04
LIMS4-201ENST00000413601 WDR26Q9H7D7 661 aa14.81□□□□□ -0.04
LIMS4-201ENST00000413601 KCTD5Q9NXV2 234 aa14.81□□□□□ -0.04
LIMS4-201ENST00000413601 GOLGA6AQ9NYA3 693 aa14.81□□□□□ -0.04
LIMS4-201ENST00000413601 CD84Q9UIB8 345 aa14.81□□□□□ -0.04
LIMS4-201ENST00000413601 RPL26L1Q9UNX3 145 aaKnown RBP14.81□□□□□ -0.04
LIMS4-201ENST00000413601 SCN8AQ9UQD0 1980 aa14.81□□□□□ -0.04
LIMS4-201ENST00000413601 ARHGEF17Q96PE2 2063 aaPredicted RBP14.8□□□□□ -0.04
LIMS4-201ENST00000413601 LY6G6EA0A0G2JKS1 128 aa14.8□□□□□ -0.04
LIMS4-201ENST00000413601 CCDC66A2RUB6 948 aa14.8□□□□□ -0.04
LIMS4-201ENST00000413601 YY2O15391 372 aa14.8□□□□□ -0.04
LIMS4-201ENST00000413601 CLDN7O95471 211 aa14.8□□□□□ -0.04
LIMS4-201ENST00000413601 ANXA6P08133 673 aa14.8□□□□□ -0.04
LIMS4-201ENST00000413601 HOXC4P09017 264 aaPredicted RBP14.8□□□□□ -0.04
LIMS4-201ENST00000413601 CDK4P11802 303 aa14.8□□□□□ -0.04
LIMS4-201ENST00000413601 CKMT1AP12532 417 aa14.8□□□□□ -0.04
LIMS4-201ENST00000413601 CTSEP14091 401 aa14.8□□□□□ -0.04
LIMS4-201ENST00000413601 ZNF30P17039 623 aa14.8□□□□□ -0.04
LIMS4-201ENST00000413601 CTNNA2P26232 953 aa14.8□□□□□ -0.04
LIMS4-201ENST00000413601 COPS2P61201 443 aa14.8□□□□□ -0.04
LIMS4-201ENST00000413601 KIF5AQ12840 1032 aa14.8□□□□□ -0.04
LIMS4-201ENST00000413601 GALNT3Q14435 633 aa14.8□□□□□ -0.04
LIMS4-201ENST00000413601 PCSK7Q16549 785 aa14.8□□□□□ -0.04
LIMS4-201ENST00000413601 QPCTQ16769 361 aa14.8□□□□□ -0.04
LIMS4-201ENST00000413601 ZCCHC8Q6NZY4 707 aaKnown RBP14.8□□□□□ -0.04
LIMS4-201ENST00000413601 BBS12Q6ZW61 710 aa14.8□□□□□ -0.04
LIMS4-201ENST00000413601 TECPR1Q7Z6L1 1165 aa14.8□□□□□ -0.04
LIMS4-201ENST00000413601 HEATR4Q86WZ0 1026 aa14.8□□□□□ -0.04
LIMS4-201ENST00000413601 FAM181AQ8N9Y4 354 aa14.8□□□□□ -0.04
LIMS4-201ENST00000413601 OR56A4Q8NGH8 313 aa14.8□□□□□ -0.04
LIMS4-201ENST00000413601 SPATA22Q8NHS9 363 aa14.8□□□□□ -0.04
LIMS4-201ENST00000413601 OR1E3Q8WZA6 343 aa14.8□□□□□ -0.04
LIMS4-201ENST00000413601 PDXPQ96GD0 296 aa14.8□□□□□ -0.04
LIMS4-201ENST00000413601 TBATAQ96M53 351 aa14.8□□□□□ -0.04
LIMS4-201ENST00000413601 HERPUD2Q9BSE4 406 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms