RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 DOPEY2Q9Y3R5 2298 aa12.17□□□□□ -0.46
LIMS2-210ENST00000413578 CLEC18AA5D8T8 446 aa12.17□□□□□ -0.46
LIMS2-210ENST00000413578 HTRA2O43464 458 aaPredicted RBP12.17□□□□□ -0.46
LIMS2-210ENST00000413578 ECEL1O95672 775 aa12.17□□□□□ -0.46
LIMS2-210ENST00000413578 GPR3P46089 330 aa12.17□□□□□ -0.46
LIMS2-210ENST00000413578 LIMK2P53671 638 aa12.17□□□□□ -0.46
LIMS2-210ENST00000413578 TPI1P60174 286 aa12.17□□□□□ -0.46
LIMS2-210ENST00000413578 BCL2L1Q07817 233 aa12.17□□□□□ -0.46
LIMS2-210ENST00000413578 TRA2AQ13595 282 aaKnown RBP eCLIP12.17□□□□□ -0.46
LIMS2-210ENST00000413578 RFTN1Q14699 578 aaPredicted RBP12.17□□□□□ -0.46
LIMS2-210ENST00000413578 CNGA3Q16281 694 aa12.17□□□□□ -0.46
LIMS2-210ENST00000413578 CA9Q16790 459 aa12.17□□□□□ -0.46
LIMS2-210ENST00000413578 AMZ1Q400G9 498 aa12.17□□□□□ -0.46
LIMS2-210ENST00000413578 CT47A1Q5JQC4 288 aaPredicted RBP12.17□□□□□ -0.46
LIMS2-210ENST00000413578 TMEM164Q5U3C3 297 aa12.17□□□□□ -0.46
LIMS2-210ENST00000413578 CDKAL1Q5VV42 579 aa12.17□□□□□ -0.46
LIMS2-210ENST00000413578 DNAJC24Q6P3W2 148 aa12.17□□□□□ -0.46
LIMS2-210ENST00000413578 CLEC18BQ6UXF7 455 aa12.17□□□□□ -0.46
LIMS2-210ENST00000413578 ARHGAP36Q6ZRI8 547 aa12.17□□□□□ -0.46
LIMS2-210ENST00000413578 NAGSQ8N159 534 aa12.17□□□□□ -0.46
LIMS2-210ENST00000413578 ARFGAP1Q8N6T3 406 aa12.17□□□□□ -0.46
LIMS2-210ENST00000413578 NPWQ8N729 165 aa12.17□□□□□ -0.46
LIMS2-210ENST00000413578 CLEC18CQ8NCF0 446 aa12.17□□□□□ -0.46
LIMS2-210ENST00000413578 ZDHHC1Q8WTX9 485 aa12.17□□□□□ -0.46
LIMS2-210ENST00000413578 PATE1Q8WXA2 126 aa12.17□□□□□ -0.46
LIMS2-210ENST00000413578 CCDC74BQ96LY2 380 aa12.17□□□□□ -0.46
LIMS2-210ENST00000413578 TAAR9Q96RI9 348 aa12.17□□□□□ -0.46
LIMS2-210ENST00000413578 SPRY4Q9C004 299 aa12.17□□□□□ -0.46
LIMS2-210ENST00000413578 CARS2Q9HA77 564 aaKnown RBP12.17□□□□□ -0.46
LIMS2-210ENST00000413578 DONSONQ9NYP3 566 aa12.17□□□□□ -0.46
LIMS2-210ENST00000413578 TUBD1Q9UJT1 453 aa12.17□□□□□ -0.46
LIMS2-210ENST00000413578 ARHGAP42A6NI28 874 aa12.16□□□□□ -0.46
LIMS2-210ENST00000413578 EIF3CLB5ME19 914 aaKnown RBP12.16□□□□□ -0.46
LIMS2-210ENST00000413578 PDE2AO00408 941 aaPredicted RBP12.16□□□□□ -0.46
LIMS2-210ENST00000413578 PPM1DO15297 605 aa12.16□□□□□ -0.46
LIMS2-210ENST00000413578 PALMO75781 387 aa12.16□□□□□ -0.46
LIMS2-210ENST00000413578 THRAP10827 490 aa12.16□□□□□ -0.46
LIMS2-210ENST00000413578 CR2P20023 1033 aa12.16□□□□□ -0.46
LIMS2-210ENST00000413578 AK4P27144 223 aaPredicted RBP12.16□□□□□ -0.46
LIMS2-210ENST00000413578 TEAD1P28347 426 aa12.16□□□□□ -0.46
LIMS2-210ENST00000413578 ALDH4A1P30038 563 aa12.16□□□□□ -0.46
LIMS2-210ENST00000413578 CSF2RBP32927 897 aa12.16□□□□□ -0.46
LIMS2-210ENST00000413578 UGT1A3P35503 534 aa12.16□□□□□ -0.46
LIMS2-210ENST00000413578 ATP1A2P50993 1020 aa12.16□□□□□ -0.46
LIMS2-210ENST00000413578 POLE2P56282 527 aa12.16□□□□□ -0.46
LIMS2-210ENST00000413578 AP1S1P61966 158 aa12.16□□□□□ -0.46
LIMS2-210ENST00000413578 POLR2LP62875 67 aaKnown RBP12.16□□□□□ -0.46
LIMS2-210ENST00000413578 ILF3Q12906 894 aaKnown RBP eCLIP12.16□□□□□ -0.46
LIMS2-210ENST00000413578 KRT31Q15323 416 aa12.16□□□□□ -0.46
LIMS2-210ENST00000413578 BORAQ6PGQ7 559 aa12.16□□□□□ -0.46
LIMS2-210ENST00000413578 RFX8Q6ZV50 586 aa12.16□□□□□ -0.46
LIMS2-210ENST00000413578 CYP4V2Q6ZWL3 525 aaPredicted RBP12.16□□□□□ -0.46
LIMS2-210ENST00000413578 OR4D9Q8NGE8 314 aa12.16□□□□□ -0.46
LIMS2-210ENST00000413578 ZNF564Q8TBZ8 553 aaPredicted RBP12.16□□□□□ -0.46
LIMS2-210ENST00000413578 JPH3Q8WXH2 748 aaPredicted RBP12.16□□□□□ -0.46
LIMS2-210ENST00000413578 NUS1Q96E22 293 aa12.16□□□□□ -0.46
LIMS2-210ENST00000413578 SCARF2Q96GP6 870 aaPredicted RBP12.16□□□□□ -0.46
LIMS2-210ENST00000413578 PSKH2Q96QS6 385 aa12.16□□□□□ -0.46
LIMS2-210ENST00000413578 EIF3CQ99613 913 aaKnown RBP12.16□□□□□ -0.46
LIMS2-210ENST00000413578 DDA1Q9BW61 102 aa12.16□□□□□ -0.46
LIMS2-210ENST00000413578 CINPQ9BW66 212 aaPredicted RBP12.16□□□□□ -0.46
LIMS2-210ENST00000413578 GSDMCQ9BYG8 508 aa12.16□□□□□ -0.46
LIMS2-210ENST00000413578 VPS16Q9H269 839 aa12.16□□□□□ -0.46
LIMS2-210ENST00000413578 GPATCH2LQ9NWQ4 482 aa12.16□□□□□ -0.46
LIMS2-210ENST00000413578 AKAP7Q9P0M2 348 aaPredicted RBP12.16□□□□□ -0.46
LIMS2-210ENST00000413578 PDP2Q9P2J9 529 aa12.16□□□□□ -0.46
LIMS2-210ENST00000413578 DACH1Q9UI36 760 aa12.16□□□□□ -0.46
LIMS2-210ENST00000413578 AP4E1Q9UPM8 1137 aa12.16□□□□□ -0.46
LIMS2-210ENST00000413578 SLC17A4Q9Y2C5 497 aa12.16□□□□□ -0.46
LIMS2-210ENST00000413578 B3GALT1Q9Y5Z6 326 aa12.16□□□□□ -0.46
LIMS2-210ENST00000413578 SDK2Q58EX2 2172 aa12.16□□□□□ -0.46
LIMS2-210ENST00000413578 USP9YO00507 2555 aaPredicted RBP12.15□□□□□ -0.46
LIMS2-210ENST00000413578 IGHV1OR21-1A0A087WYE8 117 aa12.15□□□□□ -0.46
LIMS2-210ENST00000413578 RHPN2P1A8MT19 583 aa12.15□□□□□ -0.46
LIMS2-210ENST00000413578 B4E171 279 aa12.15□□□□□ -0.46
LIMS2-210ENST00000413578 TEX33O43247 280 aa12.15□□□□□ -0.46
LIMS2-210ENST00000413578 HEXIM1O94992 359 aaKnown RBP12.15□□□□□ -0.46
LIMS2-210ENST00000413578 PEX11BO96011 259 aa12.15□□□□□ -0.46
LIMS2-210ENST00000413578 LIFP15018 202 aa12.15□□□□□ -0.46
LIMS2-210ENST00000413578 ERCC2P18074 760 aa12.15□□□□□ -0.46
LIMS2-210ENST00000413578 LHCGRP22888 699 aa12.15□□□□□ -0.46
LIMS2-210ENST00000413578 TSPAN7P41732 249 aa12.15□□□□□ -0.46
LIMS2-210ENST00000413578 SCNN1BP51168 640 aa12.15□□□□□ -0.46
LIMS2-210ENST00000413578 CDK3Q00526 305 aa12.15□□□□□ -0.46
LIMS2-210ENST00000413578 CTBSQ01459 385 aa12.15□□□□□ -0.46
LIMS2-210ENST00000413578 IL10RBQ08334 325 aa12.15□□□□□ -0.46
LIMS2-210ENST00000413578 ACOX1Q15067 660 aa12.15□□□□□ -0.46
LIMS2-210ENST00000413578 HEATR4Q86WZ0 1026 aa12.15□□□□□ -0.46
LIMS2-210ENST00000413578 MCOLN2Q8IZK6 566 aa12.15□□□□□ -0.46
LIMS2-210ENST00000413578 BMPERQ8N8U9 685 aa12.15□□□□□ -0.46
LIMS2-210ENST00000413578 AGBL5Q8NDL9 886 aa12.15□□□□□ -0.46
LIMS2-210ENST00000413578 DTD2Q96FN9 168 aa12.15□□□□□ -0.46
LIMS2-210ENST00000413578 PEBP4Q96S96 227 aa12.15□□□□□ -0.46
LIMS2-210ENST00000413578 KCTD15Q96SI1 283 aaPredicted RBP12.15□□□□□ -0.46
LIMS2-210ENST00000413578 SYT11Q9BT88 431 aa12.15□□□□□ -0.46
LIMS2-210ENST00000413578 EPN3Q9H201 632 aa12.15□□□□□ -0.46
LIMS2-210ENST00000413578 PHPT1Q9NRX4 125 aaPredicted RBP12.15□□□□□ -0.46
LIMS2-210ENST00000413578 KCTD5Q9NXV2 234 aa12.15□□□□□ -0.46
LIMS2-210ENST00000413578 TMEM9Q9P0T7 183 aa12.15□□□□□ -0.46
LIMS2-210ENST00000413578 ANKMY1Q9P2S6 941 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms