RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.46□□□□□ -0.41
CHMP3-204ENST00000409727 TIMM44O43615 452 aa12.46□□□□□ -0.41
CHMP3-204ENST00000409727 TOP3BO95985 862 aaKnown RBP12.46□□□□□ -0.41
CHMP3-204ENST00000409727 TYK2P29597 1187 aa12.46□□□□□ -0.41
CHMP3-204ENST00000409727 SEC13P55735 322 aa12.46□□□□□ -0.41
CHMP3-204ENST00000409727 RPL26P61254 145 aaKnown RBP12.46□□□□□ -0.41
CHMP3-204ENST00000409727 ACVR1Q04771 509 aa12.46□□□□□ -0.41
CHMP3-204ENST00000409727 SEMA3AQ14563 771 aa12.46□□□□□ -0.41
CHMP3-204ENST00000409727 GRM3Q14832 879 aa12.46□□□□□ -0.41
CHMP3-204ENST00000409727 PPM1JQ5JR12 505 aa12.46□□□□□ -0.41
CHMP3-204ENST00000409727 ARMC3Q5W041 872 aa12.46□□□□□ -0.41
CHMP3-204ENST00000409727 CNSTQ6PJW8 725 aa12.46□□□□□ -0.41
CHMP3-204ENST00000409727 CILP2Q8IUL8 1156 aa12.46□□□□□ -0.41
CHMP3-204ENST00000409727 NDUFAF2Q8N183 169 aa12.46□□□□□ -0.41
CHMP3-204ENST00000409727 STK40Q8N2I9 435 aa12.46□□□□□ -0.41
CHMP3-204ENST00000409727 TTC30BQ8N4P2 665 aa12.46□□□□□ -0.41
CHMP3-204ENST00000409727 GPATCH11Q8N954 259 aa12.46□□□□□ -0.41
CHMP3-204ENST00000409727 BANPQ8N9N5 519 aa12.46□□□□□ -0.41
CHMP3-204ENST00000409727 OR4L1Q8NH43 312 aa12.46□□□□□ -0.41
CHMP3-204ENST00000409727 CALML6Q8TD86 181 aa12.46□□□□□ -0.41
CHMP3-204ENST00000409727 UCMAQ8WVF2 138 aa12.46□□□□□ -0.41
CHMP3-204ENST00000409727 ACOX2Q99424 681 aa12.46□□□□□ -0.41
CHMP3-204ENST00000409727 ZFYVE1Q9HBF4 777 aa12.46□□□□□ -0.41
CHMP3-204ENST00000409727 CATSPERZQ9NTU4 200 aa12.46□□□□□ -0.41
CHMP3-204ENST00000409727 CACNA2D2Q9NY47 1150 aa12.46□□□□□ -0.41
CHMP3-204ENST00000409727 HACD3Q9P035 362 aa12.46□□□□□ -0.41
CHMP3-204ENST00000409727 RPL26L1Q9UNX3 145 aaKnown RBP12.46□□□□□ -0.41
CHMP3-204ENST00000409727 SMG5Q9UPR3 1016 aaKnown RBP12.46□□□□□ -0.41
CHMP3-204ENST00000409727 TICRRQ7Z2Z1 1910 aa12.46□□□□□ -0.42
CHMP3-204ENST00000409727 COPEO14579 308 aa12.46□□□□□ -0.42
CHMP3-204ENST00000409727 CD3EAPO15446 510 aaKnown RBP12.46□□□□□ -0.42
CHMP3-204ENST00000409727 PRPF4O43172 522 aaKnown RBP eCLIP12.46□□□□□ -0.42
CHMP3-204ENST00000409727 GPR39O43194 453 aa12.46□□□□□ -0.42
CHMP3-204ENST00000409727 MBTPS2O43462 519 aa12.46□□□□□ -0.42
CHMP3-204ENST00000409727 TYROBPO43914 113 aa12.46□□□□□ -0.42
CHMP3-204ENST00000409727 SIN3BO75182 1162 aa12.46□□□□□ -0.42
CHMP3-204ENST00000409727 APODP05090 189 aa12.46□□□□□ -0.42
CHMP3-204ENST00000409727 MC4RP32245 332 aa12.46□□□□□ -0.42
CHMP3-204ENST00000409727 GRIA2P42262 883 aa12.46□□□□□ -0.42
CHMP3-204ENST00000409727 IL12RB1P42701 662 aa12.46□□□□□ -0.42
CHMP3-204ENST00000409727 WASP42768 502 aa12.46□□□□□ -0.42
CHMP3-204ENST00000409727 CDKN1CP49918 316 aaPredicted RBP12.46□□□□□ -0.42
CHMP3-204ENST00000409727 GALK1P51570 392 aa12.46□□□□□ -0.42
CHMP3-204ENST00000409727 CSE1LP55060 971 aaKnown RBP12.46□□□□□ -0.42
CHMP3-204ENST00000409727 SEPT7Q16181 437 aaKnown RBP12.46□□□□□ -0.42
CHMP3-204ENST00000409727 UGP2Q16851 508 aa12.46□□□□□ -0.42
CHMP3-204ENST00000409727 EGFLAMQ63HQ2 1017 aa12.46□□□□□ -0.42
CHMP3-204ENST00000409727 SH2D5Q6ZV89 423 aa12.46□□□□□ -0.42
CHMP3-204ENST00000409727 USP45Q70EL2 814 aa12.46□□□□□ -0.42
CHMP3-204ENST00000409727 SLC41A1Q8IVJ1 513 aa12.46□□□□□ -0.42
CHMP3-204ENST00000409727 GABPB2Q8TAK5 448 aaPredicted RBP12.46□□□□□ -0.42
CHMP3-204ENST00000409727 TCP10LQ8TDR4 215 aa12.46□□□□□ -0.42
CHMP3-204ENST00000409727 PEX13Q92968 403 aa12.46□□□□□ -0.42
CHMP3-204ENST00000409727 ECHDC3Q96DC8 303 aa12.46□□□□□ -0.42
CHMP3-204ENST00000409727 APOPT1Q96IL0 206 aa12.46□□□□□ -0.42
CHMP3-204ENST00000409727 NDNQ99608 321 aa12.46□□□□□ -0.42
CHMP3-204ENST00000409727 CDX2Q99626 313 aaPredicted RBP12.46□□□□□ -0.42
CHMP3-204ENST00000409727 IQCGQ9H095 443 aaKnown RBP12.46□□□□□ -0.42
CHMP3-204ENST00000409727 VPS11Q9H270 941 aa12.46□□□□□ -0.42
CHMP3-204ENST00000409727 RHOJQ9H4E5 214 aa12.46□□□□□ -0.42
CHMP3-204ENST00000409727 SNX15Q9NRS6 342 aa12.46□□□□□ -0.42
CHMP3-204ENST00000409727 SLC17A7Q9P2U7 560 aa12.46□□□□□ -0.42
CHMP3-204ENST00000409727 PHTF1Q9UMS5 762 aa12.46□□□□□ -0.42
CHMP3-204ENST00000409727 CRYL1Q9Y2S2 319 aa12.46□□□□□ -0.42
CHMP3-204ENST00000409727 BPTFQ12830 3046 aa12.45□□□□□ -0.42
CHMP3-204ENST00000409727 KPNA3O00505 521 aaPredicted RBP12.45□□□□□ -0.42
CHMP3-204ENST00000409727 ASGR2P07307 311 aa12.45□□□□□ -0.42
CHMP3-204ENST00000409727 PMLP29590 882 aa12.45□□□□□ -0.42
CHMP3-204ENST00000409727 CD151P48509 253 aa12.45□□□□□ -0.42
CHMP3-204ENST00000409727 SMAD4Q13485 552 aaKnown RBP12.45□□□□□ -0.42
CHMP3-204ENST00000409727 HNRNPA1L2Q32P51 320 aaKnown RBP12.45□□□□□ -0.42
CHMP3-204ENST00000409727 FASTKD1Q53R41 847 aaKnown RBP12.45□□□□□ -0.42
CHMP3-204ENST00000409727 ZRANB3Q5FWF4 1079 aa12.45□□□□□ -0.42
CHMP3-204ENST00000409727 C9orf64Q5T6V5 341 aa12.45□□□□□ -0.42
CHMP3-204ENST00000409727 LRRC66Q68CR7 880 aa12.45□□□□□ -0.42
CHMP3-204ENST00000409727 AFTPHQ6ULP2 937 aa12.45□□□□□ -0.42
CHMP3-204ENST00000409727 FAM151BQ6UXP7 276 aa12.45□□□□□ -0.42
CHMP3-204ENST00000409727 CDHR3Q6ZTQ4 885 aa12.45□□□□□ -0.42
CHMP3-204ENST00000409727 PLPP6Q8IY26 295 aa12.45□□□□□ -0.42
CHMP3-204ENST00000409727 ATXN2LQ8WWM7 1075 aaKnown RBP12.45□□□□□ -0.42
CHMP3-204ENST00000409727 ELMO2Q96JJ3 720 aa12.45□□□□□ -0.42
CHMP3-204ENST00000409727 SRPK1Q96SB4 655 aaKnown RBP12.45□□□□□ -0.42
CHMP3-204ENST00000409727 P2RY13Q9BPV8 354 aa12.45□□□□□ -0.42
CHMP3-204ENST00000409727 MCMBPQ9BTE3 642 aa12.45□□□□□ -0.42
CHMP3-204ENST00000409727 KCNK12Q9HB15 430 aa12.45□□□□□ -0.42
CHMP3-204ENST00000409727 IL17CQ9P0M4 197 aa12.45□□□□□ -0.42
CHMP3-204ENST00000409727 SARDHQ9UL12 918 aa12.45□□□□□ -0.42
CHMP3-204ENST00000409727 HCN2Q9UL51 889 aa12.45□□□□□ -0.42
CHMP3-204ENST00000409727 EDDM13A0A1B0GTR0 161 aa12.44□□□□□ -0.42
CHMP3-204ENST00000409727 FAM95CA0A1B0GW59 222 aa12.44□□□□□ -0.42
CHMP3-204ENST00000409727 EPHX1P07099 455 aa12.44□□□□□ -0.42
CHMP3-204ENST00000409727 FOSL2P15408 326 aa12.44□□□□□ -0.42
CHMP3-204ENST00000409727 LSP1P33241 339 aa12.44□□□□□ -0.42
CHMP3-204ENST00000409727 HMGCLP35914 325 aa12.44□□□□□ -0.42
CHMP3-204ENST00000409727 HADHAP40939 763 aa12.44□□□□□ -0.42
CHMP3-204ENST00000409727 EIF2DP41214 584 aaKnown RBP12.44□□□□□ -0.42
CHMP3-204ENST00000409727 SERPINB8P50452 374 aa12.44□□□□□ -0.42
CHMP3-204ENST00000409727 METAP1P53582 386 aa12.44□□□□□ -0.42
CHMP3-204ENST00000409727 SLC18A2Q05940 514 aa12.44□□□□□ -0.42
CHMP3-204ENST00000409727 PDE1CQ14123 709 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms