RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 HTR7P34969 479 aa7.77□□□□□ -1.17
LSM5-202ENST00000409292 CASRP41180 1078 aa7.77□□□□□ -1.17
LSM5-202ENST00000409292 PTPN9P43378 593 aa7.77□□□□□ -1.17
LSM5-202ENST00000409292 NSFP46459 744 aaKnown RBP7.77□□□□□ -1.17
LSM5-202ENST00000409292 RENBPP51606 427 aa7.77□□□□□ -1.17
LSM5-202ENST00000409292 AIF1P55008 147 aa7.77□□□□□ -1.17
LSM5-202ENST00000409292 BCL2L1Q07817 233 aa7.77□□□□□ -1.17
LSM5-202ENST00000409292 HLTFQ14527 1009 aaKnown RBP eCLIP7.77□□□□□ -1.17
LSM5-202ENST00000409292 ACOX1Q15067 660 aa7.77□□□□□ -1.17
LSM5-202ENST00000409292 NAA35Q5VZE5 725 aa7.77□□□□□ -1.17
LSM5-202ENST00000409292 SCYL2Q6P3W7 929 aa7.77□□□□□ -1.17
LSM5-202ENST00000409292 KDELC2Q7Z4H8 507 aa7.77□□□□□ -1.17
LSM5-202ENST00000409292 FAM129CQ86XR2 697 aa7.77□□□□□ -1.17
LSM5-202ENST00000409292 PTRH1Q86Y79 214 aaKnown RBP7.77□□□□□ -1.17
LSM5-202ENST00000409292 SLITRK4Q8IW52 837 aa7.77□□□□□ -1.17
LSM5-202ENST00000409292 NDUFAF2Q8N183 169 aa7.77□□□□□ -1.17
LSM5-202ENST00000409292 BBS5Q8N3I7 341 aa7.77□□□□□ -1.17
LSM5-202ENST00000409292 RTL3Q8N8U3 475 aaKnown RBP7.77□□□□□ -1.17
LSM5-202ENST00000409292 MLKLQ8NB16 471 aa7.77□□□□□ -1.17
LSM5-202ENST00000409292 ZDHHC1Q8WTX9 485 aa7.77□□□□□ -1.17
LSM5-202ENST00000409292 CPA5Q8WXQ8 436 aa7.77□□□□□ -1.17
LSM5-202ENST00000409292 NTAN1Q96AB6 310 aa7.77□□□□□ -1.17
LSM5-202ENST00000409292 PDXPQ96GD0 296 aa7.77□□□□□ -1.17
LSM5-202ENST00000409292 ZPBPQ9BS86 351 aa7.77□□□□□ -1.17
LSM5-202ENST00000409292 DDA1Q9BW61 102 aa7.77□□□□□ -1.17
LSM5-202ENST00000409292 CINPQ9BW66 212 aaPredicted RBP7.77□□□□□ -1.17
LSM5-202ENST00000409292 TRIT1Q9H3H1 467 aaKnown RBP7.77□□□□□ -1.17
LSM5-202ENST00000409292 NDST4Q9H3R1 872 aa7.77□□□□□ -1.17
LSM5-202ENST00000409292 CAAP1Q9H8G2 361 aa7.77□□□□□ -1.17
LSM5-202ENST00000409292 GPN2Q9H9Y4 310 aaPredicted RBP7.77□□□□□ -1.17
LSM5-202ENST00000409292 CARS2Q9HA77 564 aaKnown RBP7.77□□□□□ -1.17
LSM5-202ENST00000409292 LRRC4CQ9HCJ2 640 aa7.77□□□□□ -1.17
LSM5-202ENST00000409292 SLC39A1Q9NY26 324 aa7.77□□□□□ -1.17
LSM5-202ENST00000409292 FOXJ2Q9P0K8 574 aa7.77□□□□□ -1.17
LSM5-202ENST00000409292 ZNF212Q9UDV6 495 aa7.77□□□□□ -1.17
LSM5-202ENST00000409292 TMEM59LQ9UK28 342 aa7.77□□□□□ -1.17
LSM5-202ENST00000409292 COQ6Q9Y2Z9 468 aa7.77□□□□□ -1.17
LSM5-202ENST00000409292 TSPAN11A1L157 253 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 ARHGAP42A6NI28 874 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 C9orf172C9J069 976 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 RASA4BC9J798 803 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 I6L893 689 aaPredicted RBP7.76□□□□□ -1.17
LSM5-202ENST00000409292 TEX33O43247 280 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 RASA4O43374 803 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 CREB3O43889 395 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 RAD1O60671 282 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 PALMO75781 387 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 RECQL5O94762 991 aaPredicted RBP7.76□□□□□ -1.17
LSM5-202ENST00000409292 PIGNO95427 931 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 CD160O95971 181 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 CALB1P05937 261 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 MYCLP1P12525 358 aaPredicted RBP7.76□□□□□ -1.17
LSM5-202ENST00000409292 CCNB1P14635 433 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 GPD1P21695 349 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 MAP4P27816 1152 aaKnown RBP7.76□□□□□ -1.17
LSM5-202ENST00000409292 MMP12P39900 470 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 ETV5P41161 510 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 CSNK1DP48730 415 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 CYP4F2P78329 520 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 GPLD1P80108 840 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 RFTN1Q14699 578 aaPredicted RBP7.76□□□□□ -1.17
LSM5-202ENST00000409292 VWA3BQ502W6 1294 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 C4orf17Q53FE4 359 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 RNFT1Q5M7Z0 435 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 MANEALQ5VSG8 457 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 NLRP14Q86W24 1093 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 FAM26EQ8N5C1 309 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 LZTR1Q8N653 840 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 EMC1Q8N766 993 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 OR4D9Q8NGE8 314 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 OR10G6Q8NH81 332 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 FAM172AQ8WUF8 416 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 NSMCE1Q8WV22 266 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 APOBEC4Q8WW27 367 aaKnown RBP7.76□□□□□ -1.17
LSM5-202ENST00000409292 JPH3Q8WXH2 748 aaPredicted RBP7.76□□□□□ -1.17
LSM5-202ENST00000409292 OR1E3Q8WZA6 343 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 NKD1Q969G9 470 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 SH3KBP1Q96B97 665 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 EXOC2Q96KP1 924 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 FUCA2Q9BTY2 467 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 SLC12A9Q9BXP2 914 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 STK33Q9BYT3 514 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 TMEM168Q9H0V1 697 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 SEMA6CQ9H3T2 930 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 SP110Q9HB58 689 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 RDH14Q9HBH5 336 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 TRNAU1APQ9NX07 287 aaKnown RBP7.76□□□□□ -1.17
LSM5-202ENST00000409292 KCNK4Q9NYG8 393 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 ACTL7AQ9Y615 435 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 PTPN13Q12923 2485 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 DOPEY2Q9Y3R5 2298 aa7.76□□□□□ -1.17
LSM5-202ENST00000409292 DOCK4Q8N1I0 1966 aa7.75□□□□□ -1.17
LSM5-202ENST00000409292 MGAQ8IWI9 3026 aa7.75□□□□□ -1.17
LSM5-202ENST00000409292 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.75□□□□□ -1.17
LSM5-202ENST00000409292 PRSS38A1L453 326 aa7.75□□□□□ -1.17
LSM5-202ENST00000409292 GOLGA6CA6NDK9 693 aa7.75□□□□□ -1.17
LSM5-202ENST00000409292 GOLGA6BA6NDN3 693 aa7.75□□□□□ -1.17
LSM5-202ENST00000409292 TMEM202A6NGA9 273 aa7.75□□□□□ -1.17
LSM5-202ENST00000409292 B4E171 279 aa7.75□□□□□ -1.17
LSM5-202ENST00000409292 EIF3CLB5ME19 914 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms