RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 TEX19Q8NA77 164 aa16.7■□□□□ 0.26
CHMP3-203ENST00000409225 RXFP2Q8WXD0 754 aa16.7■□□□□ 0.26
CHMP3-203ENST00000409225 STARD8Q92502 1023 aa16.7■□□□□ 0.26
CHMP3-203ENST00000409225 RTP4Q96DX8 246 aa16.7■□□□□ 0.26
CHMP3-203ENST00000409225 UBA2Q9UBT2 640 aaPredicted RBP16.7■□□□□ 0.26
CHMP3-203ENST00000409225 CFAP69A5D8W1 941 aa16.69■□□□□ 0.26
CHMP3-203ENST00000409225 A8MX80 341 aa16.69■□□□□ 0.26
CHMP3-203ENST00000409225 K7EM74 188 aa16.69■□□□□ 0.26
CHMP3-203ENST00000409225 PDE2AO00408 941 aaPredicted RBP16.69■□□□□ 0.26
CHMP3-203ENST00000409225 GM2AP17900 193 aa16.69■□□□□ 0.26
CHMP3-203ENST00000409225 TCN2P20062 427 aa16.69■□□□□ 0.26
CHMP3-203ENST00000409225 EPHB2P29323 1055 aa16.69■□□□□ 0.26
CHMP3-203ENST00000409225 SDC4P31431 198 aa16.69■□□□□ 0.26
CHMP3-203ENST00000409225 MC1RQ01726 317 aa16.69■□□□□ 0.26
CHMP3-203ENST00000409225 ACOX1Q15067 660 aa16.69■□□□□ 0.26
CHMP3-203ENST00000409225 SNAP47Q5SQN1 464 aa16.69■□□□□ 0.26
CHMP3-203ENST00000409225 NAA35Q5VZE5 725 aa16.69■□□□□ 0.26
CHMP3-203ENST00000409225 TIPARPQ7Z3E1 657 aaKnown RBP16.69■□□□□ 0.26
CHMP3-203ENST00000409225 NAGSQ8N159 534 aa16.69■□□□□ 0.26
CHMP3-203ENST00000409225 PYROXD2Q8N2H3 581 aa16.69■□□□□ 0.26
CHMP3-203ENST00000409225 RTL3Q8N8U3 475 aaKnown RBP16.69■□□□□ 0.26
CHMP3-203ENST00000409225 BMPERQ8N8U9 685 aa16.69■□□□□ 0.26
CHMP3-203ENST00000409225 GPT2Q8TD30 523 aa16.69■□□□□ 0.26
CHMP3-203ENST00000409225 TEFMQ96QE5 360 aaKnown RBP16.69■□□□□ 0.26
CHMP3-203ENST00000409225 DPYSL5Q9BPU6 564 aa16.69■□□□□ 0.26
CHMP3-203ENST00000409225 GTPBP10A4D1E9 387 aaKnown RBP16.68■□□□□ 0.26
CHMP3-203ENST00000409225 A8MU76 341 aa16.68■□□□□ 0.26
CHMP3-203ENST00000409225 LSM8O95777 96 aaKnown RBP16.68■□□□□ 0.26
CHMP3-203ENST00000409225 FUCA1P04066 466 aa16.68■□□□□ 0.26
CHMP3-203ENST00000409225 CEACAM5P06731 702 aa16.68■□□□□ 0.26
CHMP3-203ENST00000409225 MYCLP1P12525 358 aaPredicted RBP16.68■□□□□ 0.26
CHMP3-203ENST00000409225 GNLYP22749 145 aa16.68■□□□□ 0.26
CHMP3-203ENST00000409225 ABHD18Q0P651 414 aa16.68■□□□□ 0.26
CHMP3-203ENST00000409225 RAPGEF1Q13905 1077 aa16.68■□□□□ 0.26
CHMP3-203ENST00000409225 FHL5Q5TD97 284 aa16.68■□□□□ 0.26
CHMP3-203ENST00000409225 SMYD5Q6GMV2 418 aa16.68■□□□□ 0.26
CHMP3-203ENST00000409225 TMEM71Q6P5X7 295 aa16.68■□□□□ 0.26
CHMP3-203ENST00000409225 ZNF761Q86XN6 746 aaPredicted RBP16.68■□□□□ 0.26
CHMP3-203ENST00000409225 JOSD2Q8TAC2 188 aa16.68■□□□□ 0.26
CHMP3-203ENST00000409225 PTCD2Q8WV60 388 aaKnown RBP16.68■□□□□ 0.26
CHMP3-203ENST00000409225 TUBGCP5Q96RT8 1024 aa16.68■□□□□ 0.26
CHMP3-203ENST00000409225 SPRY4Q9C004 299 aa16.68■□□□□ 0.26
CHMP3-203ENST00000409225 ATP13A3Q9H7F0 1226 aa16.68■□□□□ 0.26
CHMP3-203ENST00000409225 PHPT1Q9NRX4 125 aaPredicted RBP16.68■□□□□ 0.26
CHMP3-203ENST00000409225 TRNAU1APQ9NX07 287 aaKnown RBP16.68■□□□□ 0.26
CHMP3-203ENST00000409225 SUFUQ9UMX1 484 aa16.68■□□□□ 0.26
CHMP3-203ENST00000409225 ST14Q9Y5Y6 855 aa16.68■□□□□ 0.26
CHMP3-203ENST00000409225 MRPS18BQ9Y676 258 aaKnown RBP16.68■□□□□ 0.26
CHMP3-203ENST00000409225 VPS4BO75351 444 aa16.67■□□□□ 0.26
CHMP3-203ENST00000409225 MMEP08473 750 aa16.67■□□□□ 0.26
CHMP3-203ENST00000409225 SERPINA4P29622 427 aa16.67■□□□□ 0.26
CHMP3-203ENST00000409225 RGRP47804 291 aa16.67■□□□□ 0.26
CHMP3-203ENST00000409225 HDAC4P56524 1084 aa16.67■□□□□ 0.26
CHMP3-203ENST00000409225 YBEYP58557 167 aaPredicted RBP16.67■□□□□ 0.26
CHMP3-203ENST00000409225 NOMO3P69849 1222 aa16.67■□□□□ 0.26
CHMP3-203ENST00000409225 CTBSQ01459 385 aa16.67■□□□□ 0.26
CHMP3-203ENST00000409225 SQSTM1Q13501 440 aa16.67■□□□□ 0.26
CHMP3-203ENST00000409225 PARP15Q460N3 678 aa16.67■□□□□ 0.26
CHMP3-203ENST00000409225 AFMIDQ63HM1 303 aa16.67■□□□□ 0.26
CHMP3-203ENST00000409225 CEACAM20Q6UY09 585 aa16.67■□□□□ 0.26
CHMP3-203ENST00000409225 DPPA4Q7L190 304 aa16.67■□□□□ 0.26
CHMP3-203ENST00000409225 SRLQ86TD4 932 aa16.67■□□□□ 0.26
CHMP3-203ENST00000409225 NOP9Q86U38 636 aaKnown RBP16.67■□□□□ 0.26
CHMP3-203ENST00000409225 HEATR4Q86WZ0 1026 aa16.67■□□□□ 0.26
CHMP3-203ENST00000409225 FAM172AQ8WUF8 416 aa16.67■□□□□ 0.26
CHMP3-203ENST00000409225 AHCYL2Q96HN2 611 aaKnown RBP16.67■□□□□ 0.26
CHMP3-203ENST00000409225 VPS4AQ9UN37 437 aa16.67■□□□□ 0.26
CHMP3-203ENST00000409225 KCNMB2Q9Y691 235 aa16.67■□□□□ 0.26
CHMP3-203ENST00000409225 TEP1Q99973 2627 aaKnown RBP16.66■□□□□ 0.26
CHMP3-203ENST00000409225 C2CD4BA6NLJ0 364 aa16.66■□□□□ 0.26
CHMP3-203ENST00000409225 MKRN2OSH3BPM6 223 aa16.66■□□□□ 0.26
CHMP3-203ENST00000409225 J3KR12 359 aa16.66■□□□□ 0.26
CHMP3-203ENST00000409225 CREB3O43889 395 aa16.66■□□□□ 0.26
CHMP3-203ENST00000409225 STK17BO94768 372 aa16.66■□□□□ 0.26
CHMP3-203ENST00000409225 MTIF2P46199 727 aaKnown RBP16.66■□□□□ 0.26
CHMP3-203ENST00000409225 COPB1P53618 953 aaKnown RBP16.66■□□□□ 0.26
CHMP3-203ENST00000409225 MC2RQ01718 297 aa16.66■□□□□ 0.26
CHMP3-203ENST00000409225 CAPRIN2Q6IMN6 1127 aaKnown RBP16.66■□□□□ 0.26
CHMP3-203ENST00000409225 ASB18Q6ZVZ8 466 aa16.66■□□□□ 0.26
CHMP3-203ENST00000409225 STRADAQ7RTN6 431 aa16.66■□□□□ 0.26
CHMP3-203ENST00000409225 ELOA2Q8IYF1 753 aaPredicted RBP16.66■□□□□ 0.26
CHMP3-203ENST00000409225 NTAN1Q96AB6 310 aa16.66■□□□□ 0.26
CHMP3-203ENST00000409225 NUS1Q96E22 293 aa16.66■□□□□ 0.26
CHMP3-203ENST00000409225 FRMD8Q9BZ67 464 aaPredicted RBP16.66■□□□□ 0.26
CHMP3-203ENST00000409225 APMAPQ9HDC9 416 aa16.66■□□□□ 0.26
CHMP3-203ENST00000409225 PRDM8Q9NQV8 689 aa16.66■□□□□ 0.26
CHMP3-203ENST00000409225 PLEKHM1Q9Y4G2 1056 aa16.66■□□□□ 0.26
CHMP3-203ENST00000409225 KCTD3Q9Y597 815 aa16.66■□□□□ 0.26
CHMP3-203ENST00000409225 TRBV23OR9-2A0A075B6M9 112 aa16.65■□□□□ 0.26
CHMP3-203ENST00000409225 A1L4Q6 167 aa16.65■□□□□ 0.26
CHMP3-203ENST00000409225 MAN1A1P33908 653 aa16.65■□□□□ 0.26
CHMP3-203ENST00000409225 ADCY8P40145 1251 aa16.65■□□□□ 0.26
CHMP3-203ENST00000409225 ACTR1BP42025 376 aa16.65■□□□□ 0.26
CHMP3-203ENST00000409225 PTPN9P43378 593 aa16.65■□□□□ 0.26
CHMP3-203ENST00000409225 POLD2P49005 469 aa16.65■□□□□ 0.26
CHMP3-203ENST00000409225 ACTR1AP61163 376 aa16.65■□□□□ 0.26
CHMP3-203ENST00000409225 GPLD1P80108 840 aa16.65■□□□□ 0.26
CHMP3-203ENST00000409225 BCL2L1Q07817 233 aa16.65■□□□□ 0.26
CHMP3-203ENST00000409225 DENND2CQ68D51 928 aa16.65■□□□□ 0.26
CHMP3-203ENST00000409225 TCTN3Q6NUS6 607 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms