RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 SNAPC3Q92966 411 aa4.88□□□□□ -1.63
HMGB3P18-201ENST00000406327 ZKSCAN4Q969J2 545 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P18-201ENST00000406327 ELMOD3Q96FG2 381 aa4.88□□□□□ -1.63
HMGB3P18-201ENST00000406327 OR2A14Q96R47 310 aa4.88□□□□□ -1.63
HMGB3P18-201ENST00000406327 FAM110AQ9BQ89 295 aa4.88□□□□□ -1.63
HMGB3P18-201ENST00000406327 SEMA4CQ9C0C4 833 aa4.88□□□□□ -1.63
HMGB3P18-201ENST00000406327 HRH4Q9H3N8 390 aa4.88□□□□□ -1.63
HMGB3P18-201ENST00000406327 ZWILCHQ9H900 591 aa4.88□□□□□ -1.63
HMGB3P18-201ENST00000406327 ZCCHC17Q9NP64 241 aaKnown RBP4.88□□□□□ -1.63
HMGB3P18-201ENST00000406327 SPAG4Q9NPE6 437 aa4.88□□□□□ -1.63
HMGB3P18-201ENST00000406327 ARHGEF38Q9NXL2 777 aa4.88□□□□□ -1.63
HMGB3P18-201ENST00000406327 CNOT8Q9UFF9 292 aaKnown RBP4.88□□□□□ -1.63
HMGB3P18-201ENST00000406327 LSM4Q9Y4Z0 139 aaKnown RBP4.88□□□□□ -1.63
HMGB3P18-201ENST00000406327 ANKRD50Q9ULJ7 1429 aa4.88□□□□□ -1.63
HMGB3P18-201ENST00000406327 PZPP20742 1482 aa4.88□□□□□ -1.63
HMGB3P18-201ENST00000406327 RPRD2Q5VT52 1461 aaKnown RBP4.88□□□□□ -1.63
HMGB3P18-201ENST00000406327 MBD5Q9P267 1494 aa4.88□□□□□ -1.63
HMGB3P18-201ENST00000406327 GCC2Q8IWJ2 1684 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 hCG_1809904A0A1W2PP81 198 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 A0A1W2PPE2 198 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 A0A1W2PR64 198 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 OR2A25A4D2G3 310 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 GAGE12JA6NER3 117 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 HSPB6O14558 160 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 AVILO75366 819 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 NDUFB4O95168 129 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 AFPP02771 609 aaKnown RBP4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 HIST1H2ABP04908 130 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 NHLRC4P0CG21 123 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 MYBL1P10243 752 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 SELLP14151 372 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 IL7RP16871 459 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 KRT4P19013 534 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 HIST1H2ADP20671 130 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 MYF6P23409 242 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 SP100P23497 879 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 SHMT1P34896 483 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 PNLIPRP2P54317 469 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 INHBCP55103 352 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 MRPS34P82930 218 aaKnown RBP4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 FAM27E3Q08E93 113 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 GRIK3Q13003 919 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 KLF10Q13118 480 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 PKP1Q13835 747 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 TMEM119Q4V9L6 283 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 MIDNQ504T8 468 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 ESCO2Q56NI9 601 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 C6orf10Q5SRN2 563 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 PRAMEF19Q5SWL8 479 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 ERMARDQ5T6L9 678 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 KRT79Q5XKE5 535 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 PMS2CLQ68D20 193 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 HEPHL1Q6MZM0 1159 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 TRILQ7L0X0 811 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 HIST3H2AQ7L7L0 130 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 PATL1Q86TB9 770 aaKnown RBP4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 WDR63Q8IWG1 891 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 SFTPA2Q8IWL1 248 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 GALNT16Q8N428 558 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 HORMAD2Q8N7B1 307 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 SCCPDHQ8NBX0 429 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 SLC44A5Q8NCS7 719 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 GPR150Q8NGU9 434 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 HUS1BQ8NHY5 278 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 RRNAD1Q96FB5 475 aaKnown RBP4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 SLC41A2Q96JW4 573 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 ZNF570Q96NI8 536 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 GCNAQ96QF7 691 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 SCNM1Q9BWG6 230 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 B3GNT4Q9C0J1 378 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 SIL1Q9H173 461 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 MVB12BQ9H7P6 319 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 SETD4Q9NVD3 440 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 KLHL13Q9P2N7 655 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 COPG2Q9UBF2 871 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 CMAHPQ9Y471 501 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 CEPT1Q9Y6K0 416 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 NUP155O75694 1391 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 C9orf84Q5VXU9 1444 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 KIAA1107Q9UPP5 1409 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 SHANK2Q9UPX8 1470 aa4.87□□□□□ -1.63
HMGB3P18-201ENST00000406327 KIF14Q15058 1648 aa4.86□□□□□ -1.63
HMGB3P18-201ENST00000406327 ADCY10Q96PN6 1610 aa4.86□□□□□ -1.63
HMGB3P18-201ENST00000406327 A6NL46 340 aa4.86□□□□□ -1.63
HMGB3P18-201ENST00000406327 MATN3O15232 486 aa4.86□□□□□ -1.63
HMGB3P18-201ENST00000406327 JRKO75564 520 aa4.86□□□□□ -1.63
HMGB3P18-201ENST00000406327 PRKCGP05129 697 aa4.86□□□□□ -1.63
HMGB3P18-201ENST00000406327 TPOP07202 933 aa4.86□□□□□ -1.63
HMGB3P18-201ENST00000406327 QDPRP09417 244 aa4.86□□□□□ -1.63
HMGB3P18-201ENST00000406327 SCG2P13521 617 aa4.86□□□□□ -1.63
HMGB3P18-201ENST00000406327 DDX5P17844 614 aaKnown RBP4.86□□□□□ -1.63
HMGB3P18-201ENST00000406327 GPTP24298 496 aa4.86□□□□□ -1.63
HMGB3P18-201ENST00000406327 TNFSF8P32971 234 aa4.86□□□□□ -1.63
HMGB3P18-201ENST00000406327 PRCPP42785 496 aa4.86□□□□□ -1.63
HMGB3P18-201ENST00000406327 RAD23AP54725 363 aa4.86□□□□□ -1.63
HMGB3P18-201ENST00000406327 RAD23BP54727 409 aa4.86□□□□□ -1.63
HMGB3P18-201ENST00000406327 UBXN2AP68543 259 aa4.86□□□□□ -1.63
HMGB3P18-201ENST00000406327 ZXDAP98168 799 aa4.86□□□□□ -1.63
HMGB3P18-201ENST00000406327 SORDQ00796 357 aa4.86□□□□□ -1.63
HMGB3P18-201ENST00000406327 ID2Q02363 134 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms