RNA–Protein interactions for RNA: ENST00000404694.3

CGREF1-205, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CGREF1, Length 1,376 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-205ENST00000404694 CDKL3Q8IVW4 592 aaPredicted RBP16.57■□□□□ 0.24
CGREF1-205ENST00000404694 BBS5Q8N3I7 341 aa16.57■□□□□ 0.24
CGREF1-205ENST00000404694 ATG4AQ8WYN0 398 aa16.57■□□□□ 0.24
CGREF1-205ENST00000404694 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.57■□□□□ 0.24
CGREF1-205ENST00000404694 SEC14L1Q92503 715 aa16.57■□□□□ 0.24
CGREF1-205ENST00000404694 CNTNAP3BQ96NU0 1288 aa16.57■□□□□ 0.24
CGREF1-205ENST00000404694 CNTNAP3Q9BZ76 1288 aa16.57■□□□□ 0.24
CGREF1-205ENST00000404694 FAM129AQ9BZQ8 928 aa16.57■□□□□ 0.24
CGREF1-205ENST00000404694 TOR4AQ9NXH8 423 aa16.57■□□□□ 0.24
CGREF1-205ENST00000404694 APOBEC2Q9Y235 224 aaKnown RBP16.57■□□□□ 0.24
CGREF1-205ENST00000404694 ATP8A1Q9Y2Q0 1164 aa16.57■□□□□ 0.24
CGREF1-205ENST00000404694 WDFY3Q8IZQ1 3526 aa16.57■□□□□ 0.24
CGREF1-205ENST00000404694 TPRP12270 2363 aaKnown RBP16.56■□□□□ 0.24
CGREF1-205ENST00000404694 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.56■□□□□ 0.24
CGREF1-205ENST00000404694 TTC24A2A3L6 582 aaPredicted RBP16.56■□□□□ 0.24
CGREF1-205ENST00000404694 PPP1R12AO14974 1030 aaPredicted RBP16.56■□□□□ 0.24
CGREF1-205ENST00000404694 TTI1O43156 1089 aa16.56■□□□□ 0.24
CGREF1-205ENST00000404694 HYAL3O43820 417 aaPredicted RBP16.56■□□□□ 0.24
CGREF1-205ENST00000404694 SDC3O75056 442 aa16.56■□□□□ 0.24
CGREF1-205ENST00000404694 HEXIM1O94992 359 aaKnown RBP16.56■□□□□ 0.24
CGREF1-205ENST00000404694 PRKCGP05129 697 aa16.56■□□□□ 0.24
CGREF1-205ENST00000404694 PECAM1P16284 738 aaPredicted RBP16.56■□□□□ 0.24
CGREF1-205ENST00000404694 TNFRSF8P28908 595 aa16.56■□□□□ 0.24
CGREF1-205ENST00000404694 IGFALSP35858 605 aa16.56■□□□□ 0.24
CGREF1-205ENST00000404694 MMP13P45452 471 aa16.56■□□□□ 0.24
CGREF1-205ENST00000404694 RABIFP47224 123 aa16.56■□□□□ 0.24
CGREF1-205ENST00000404694 MAXP61244 160 aa16.56■□□□□ 0.24
CGREF1-205ENST00000404694 MARC1Q5VT66 337 aa16.56■□□□□ 0.24
CGREF1-205ENST00000404694 KDM7AQ6ZMT4 941 aa16.56■□□□□ 0.24
CGREF1-205ENST00000404694 SLCO6A1Q86UG4 719 aa16.56■□□□□ 0.24
CGREF1-205ENST00000404694 DCP2Q8IU60 420 aaKnown RBP16.56■□□□□ 0.24
CGREF1-205ENST00000404694 PNPLA1Q8N8W4 532 aa16.56■□□□□ 0.24
CGREF1-205ENST00000404694 CCDC89Q8N998 374 aa16.56■□□□□ 0.24
CGREF1-205ENST00000404694 HNRNPLLQ8WVV9 542 aaKnown RBP16.56■□□□□ 0.24
CGREF1-205ENST00000404694 CENPTQ96BT3 561 aa16.56■□□□□ 0.24
CGREF1-205ENST00000404694 OLFM3Q96PB7 478 aa16.56■□□□□ 0.24
CGREF1-205ENST00000404694 NUDCD1Q96RS6 583 aa16.56■□□□□ 0.24
CGREF1-205ENST00000404694 ERP44Q9BS26 406 aa16.56■□□□□ 0.24
CGREF1-205ENST00000404694 SCNM1Q9BWG6 230 aa16.56■□□□□ 0.24
CGREF1-205ENST00000404694 DTLQ9NZJ0 730 aa16.56■□□□□ 0.24
CGREF1-205ENST00000404694 FTSJ1Q9UET6 329 aa16.56■□□□□ 0.24
CGREF1-205ENST00000404694 COQ6Q9Y2Z9 468 aa16.56■□□□□ 0.24
CGREF1-205ENST00000404694 HEY1Q9Y5J3 304 aa16.56■□□□□ 0.24
CGREF1-205ENST00000404694 TDRD6O60522 2096 aaKnown RBP16.56■□□□□ 0.24
CGREF1-205ENST00000404694 BHMG1C9JSJ3 638 aaPredicted RBP16.55■□□□□ 0.24
CGREF1-205ENST00000404694 TNFSF14O43557 240 aa16.55■□□□□ 0.24
CGREF1-205ENST00000404694 SOCS5O75159 536 aa16.55■□□□□ 0.24
CGREF1-205ENST00000404694 ATXN1LP0C7T5 689 aaKnown RBP16.55■□□□□ 0.24
CGREF1-205ENST00000404694 C6P13671 934 aa16.55■□□□□ 0.24
CGREF1-205ENST00000404694 KCNJ1P48048 391 aa16.55■□□□□ 0.24
CGREF1-205ENST00000404694 PFN3P60673 137 aa16.55■□□□□ 0.24
CGREF1-205ENST00000404694 SEMG2Q02383 582 aa16.55■□□□□ 0.24
CGREF1-205ENST00000404694 GBE1Q04446 702 aa16.55■□□□□ 0.24
CGREF1-205ENST00000404694 AKAP13Q12802 2813 aa16.55■□□□□ 0.24
CGREF1-205ENST00000404694 CUL1Q13616 776 aa16.55■□□□□ 0.24
CGREF1-205ENST00000404694 PTK6Q13882 451 aa16.55■□□□□ 0.24
CGREF1-205ENST00000404694 PPP1R7Q15435 360 aa16.55■□□□□ 0.24
CGREF1-205ENST00000404694 MAP9Q49MG5 647 aa16.55■□□□□ 0.24
CGREF1-205ENST00000404694 TIGD7Q6NT04 549 aaPredicted RBP16.55■□□□□ 0.24
CGREF1-205ENST00000404694 C4orf22Q6V702 233 aa16.55■□□□□ 0.24
CGREF1-205ENST00000404694 RAB44Q7Z6P3 723 aaPredicted RBP16.55■□□□□ 0.24
CGREF1-205ENST00000404694 TEX26Q8N6G2 289 aa16.55■□□□□ 0.24
CGREF1-205ENST00000404694 PAF1Q8N7H5 531 aa16.55■□□□□ 0.24
CGREF1-205ENST00000404694 TP53I13Q8NBR0 393 aaPredicted RBP16.55■□□□□ 0.24
CGREF1-205ENST00000404694 ARID1BQ8NFD5 2236 aaPredicted RBP16.55■□□□□ 0.24
CGREF1-205ENST00000404694 SPOCK2Q92563 424 aa16.55■□□□□ 0.24
CGREF1-205ENST00000404694 C1QTNF7Q9BXJ2 289 aa16.55■□□□□ 0.24
CGREF1-205ENST00000404694 CAAP1Q9H8G2 361 aa16.55■□□□□ 0.24
CGREF1-205ENST00000404694 NOD2Q9HC29 1040 aa16.55■□□□□ 0.24
CGREF1-205ENST00000404694 NT5MQ9NPB1 228 aa16.55■□□□□ 0.24
CGREF1-205ENST00000404694 SCUBE2Q9NQ36 999 aa16.55■□□□□ 0.24
CGREF1-205ENST00000404694 FAM114A2Q9NRY5 505 aa16.55■□□□□ 0.24
CGREF1-205ENST00000404694 SAE1Q9UBE0 346 aaPredicted RBP16.55■□□□□ 0.24
CGREF1-205ENST00000404694 PCDHGC4Q9Y5F7 938 aa16.55■□□□□ 0.24
CGREF1-205ENST00000404694 SPTY2D1-AS1A0A0U1RR47 76 aa16.54■□□□□ 0.24
CGREF1-205ENST00000404694 H7C0C1 242 aa16.54■□□□□ 0.24
CGREF1-205ENST00000404694 MTSS1O43312 755 aa16.54■□□□□ 0.24
CGREF1-205ENST00000404694 HTRA2O43464 458 aaPredicted RBP16.54■□□□□ 0.24
CGREF1-205ENST00000404694 DKK1O94907 266 aa16.54■□□□□ 0.24
CGREF1-205ENST00000404694 ATP5OP48047 213 aa16.54■□□□□ 0.24
CGREF1-205ENST00000404694 LIG3P49916 1009 aa16.54■□□□□ 0.24
CGREF1-205ENST00000404694 POLR2LP62875 67 aaKnown RBP16.54■□□□□ 0.24
CGREF1-205ENST00000404694 SLC10A2Q12908 348 aaPredicted RBP16.54■□□□□ 0.24
CGREF1-205ENST00000404694 RALGDSQ12967 914 aa16.54■□□□□ 0.24
CGREF1-205ENST00000404694 PDE1CQ14123 709 aaPredicted RBP16.54■□□□□ 0.24
CGREF1-205ENST00000404694 FZD2Q14332 565 aa16.54■□□□□ 0.24
CGREF1-205ENST00000404694 IRF4Q15306 451 aa16.54■□□□□ 0.24
CGREF1-205ENST00000404694 RALGPS1Q5JS13 557 aa16.54■□□□□ 0.24
CGREF1-205ENST00000404694 TPRG1LQ5T0D9 272 aa16.54■□□□□ 0.24
CGREF1-205ENST00000404694 DUPD1Q68J44 220 aa16.54■□□□□ 0.24
CGREF1-205ENST00000404694 DARS2Q6PI48 645 aaKnown RBP16.54■□□□□ 0.24
CGREF1-205ENST00000404694 FBXO38Q6PIJ6 1188 aa16.54■□□□□ 0.24
CGREF1-205ENST00000404694 NPNTQ6UXI9 565 aa16.54■□□□□ 0.24
CGREF1-205ENST00000404694 GSTA5Q7RTV2 222 aa16.54■□□□□ 0.24
CGREF1-205ENST00000404694 CHCHD4Q8N4Q1 142 aa16.54■□□□□ 0.24
CGREF1-205ENST00000404694 EID2Q8N6I1 236 aa16.54■□□□□ 0.24
CGREF1-205ENST00000404694 TFB1MQ8WVM0 346 aaKnown RBP16.54■□□□□ 0.24
CGREF1-205ENST00000404694 ADAMTS14Q8WXS8 1223 aa16.54■□□□□ 0.24
CGREF1-205ENST00000404694 MAML1Q92585 1016 aa16.54■□□□□ 0.24
CGREF1-205ENST00000404694 FATE1Q969F0 183 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms