RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 HS6ST1O60243 411 aa3.97□□□□□ -1.77
HMGB1P17-201ENST00000403495 HOXB5P09067 269 aa3.97□□□□□ -1.77
HMGB1P17-201ENST00000403495 NNMTP40261 264 aa3.97□□□□□ -1.77
HMGB1P17-201ENST00000403495 NRIP1P48552 1158 aa3.97□□□□□ -1.77
HMGB1P17-201ENST00000403495 INHBEP58166 350 aa3.97□□□□□ -1.77
HMGB1P17-201ENST00000403495 CTTNQ14247 550 aaKnown RBP3.97□□□□□ -1.77
HMGB1P17-201ENST00000403495 DLG2Q15700 870 aa3.97□□□□□ -1.77
HMGB1P17-201ENST00000403495 NAB2Q15742 525 aa3.97□□□□□ -1.77
HMGB1P17-201ENST00000403495 PRTGQ2VWP7 1150 aa3.97□□□□□ -1.77
HMGB1P17-201ENST00000403495 USP41Q3LFD5 358 aa3.97□□□□□ -1.77
HMGB1P17-201ENST00000403495 MANEAQ5SRI9 462 aa3.97□□□□□ -1.77
HMGB1P17-201ENST00000403495 JADE1Q6IE81 842 aa3.97□□□□□ -1.77
HMGB1P17-201ENST00000403495 PQLC2Q6ZP29 291 aa3.97□□□□□ -1.77
HMGB1P17-201ENST00000403495 MON1BQ7L1V2 547 aa3.97□□□□□ -1.77
HMGB1P17-201ENST00000403495 KBTBD6Q86V97 674 aa3.97□□□□□ -1.77
HMGB1P17-201ENST00000403495 TICAM1Q8IUC6 712 aa3.97□□□□□ -1.77
HMGB1P17-201ENST00000403495 SFTPA2Q8IWL1 248 aa3.97□□□□□ -1.77
HMGB1P17-201ENST00000403495 ARFGAP1Q8N6T3 406 aa3.97□□□□□ -1.77
HMGB1P17-201ENST00000403495 NRACQ8N912 160 aa3.97□□□□□ -1.77
HMGB1P17-201ENST00000403495 IL17RCQ8NAC3 791 aa3.97□□□□□ -1.77
HMGB1P17-201ENST00000403495 ZBTB8BQ8NAP8 495 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P17-201ENST00000403495 C7orf57Q8NEG2 295 aa3.97□□□□□ -1.77
HMGB1P17-201ENST00000403495 RND1Q92730 232 aa3.97□□□□□ -1.77
HMGB1P17-201ENST00000403495 RRNAD1Q96FB5 475 aaKnown RBP3.97□□□□□ -1.77
HMGB1P17-201ENST00000403495 URB1-AS1Q96HZ7 61 aa3.97□□□□□ -1.77
HMGB1P17-201ENST00000403495 VCPIP1Q96JH7 1222 aa3.97□□□□□ -1.77
HMGB1P17-201ENST00000403495 FEM1CQ96JP0 617 aa3.97□□□□□ -1.77
HMGB1P17-201ENST00000403495 TMEM68Q96MH6 324 aa3.97□□□□□ -1.77
HMGB1P17-201ENST00000403495 OR2A14Q96R47 310 aa3.97□□□□□ -1.77
HMGB1P17-201ENST00000403495 CRAMP1Q96RY5 1269 aa3.97□□□□□ -1.77
HMGB1P17-201ENST00000403495 PAFAH2Q99487 392 aa3.97□□□□□ -1.77
HMGB1P17-201ENST00000403495 FAM110AQ9BQ89 295 aa3.97□□□□□ -1.77
HMGB1P17-201ENST00000403495 KLHL4Q9C0H6 718 aa3.97□□□□□ -1.77
HMGB1P17-201ENST00000403495 KCNN2Q9H2S1 579 aa3.97□□□□□ -1.77
HMGB1P17-201ENST00000403495 PIGMQ9H3S5 423 aa3.97□□□□□ -1.77
HMGB1P17-201ENST00000403495 MKKSQ9NPJ1 570 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P17-201ENST00000403495 RCOR1Q9UKL0 485 aa3.97□□□□□ -1.77
HMGB1P17-201ENST00000403495 TTLL3Q9Y4R7 772 aa3.97□□□□□ -1.77
HMGB1P17-201ENST00000403495 RAI2Q9Y5P3 530 aa3.97□□□□□ -1.77
HMGB1P17-201ENST00000403495 HS3ST3B1Q9Y662 390 aa3.97□□□□□ -1.77
HMGB1P17-201ENST00000403495 CLIC4Q9Y696 253 aa3.97□□□□□ -1.77
HMGB1P17-201ENST00000403495 STON1Q9Y6Q2 735 aa3.97□□□□□ -1.77
HMGB1P17-201ENST00000403495 A0A1B0GVT2 93 aa3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 TSPY2A6NKD2 308 aa3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 SH2B2O14492 632 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 ATP2A1O14983 1001 aa3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 HCRTR2O43614 444 aa3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 ITM2AO43736 263 aa3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 PLOD3O60568 738 aa3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 KLKB1P03952 638 aa3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 CYP1A2P05177 515 aa3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 TSPY3P0CV98 308 aa3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 TSPY8P0CW00 308 aa3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 ANXA7P20073 488 aaKnown RBP3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 ALDH7A1P49419 539 aaKnown RBP3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 METAP2P50579 478 aaKnown RBP eCLIP3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 SUOXP51687 545 aa3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 TSPY1Q01534 308 aa3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 CDC16Q13042 620 aa3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 PLEKHS1Q5SXH7 462 aa3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 C6orf141Q5SZD1 244 aa3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 MORN5Q5VZ52 161 aa3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 ARMC3Q5W041 872 aa3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 PMS2CLQ68D20 193 aa3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 DPPA4Q7L190 304 aa3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 LINGO2Q7L985 606 aa3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 WDR63Q8IWG1 891 aa3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 SRRM1Q8IYB3 904 aaKnown RBP3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 MMP21Q8N119 569 aa3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 SCCPDHQ8NBX0 429 aa3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 NEXN-AS1Q8NBZ9 246 aa3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 OR8K5Q8NH50 307 aa3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 HMGCLL1Q8TB92 370 aa3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 LPAR1Q92633 364 aa3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 SLC22A18Q96BI1 424 aa3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 NLRP4Q96MN2 994 aa3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 SLITRK1Q96PX8 696 aa3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 ACOX2Q99424 681 aa3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 NCAPGQ9BPX3 1015 aa3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 PCGF1Q9BSM1 259 aa3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 TASP1Q9H6P5 420 aa3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 PPP1R3EQ9H7J1 279 aa3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 FZD3Q9NPG1 666 aa3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 HINT3Q9NQE9 182 aaKnown RBP3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 OR6C3Q9NZP0 311 aa3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 MRPL15Q9P015 296 aaKnown RBP3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 NFKBIL1Q9UBC1 381 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 COPG2Q9UBF2 871 aa3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 PADI1Q9ULC6 663 aa3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 ERVK-11Q9UQG0 969 aa3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 BTBD3Q9Y2F9 522 aa3.96□□□□□ -1.78
HMGB1P17-201ENST00000403495 IGLV5-39A0A0G2JS06 123 aa3.95□□□□□ -1.78
HMGB1P17-201ENST00000403495 OR2A25A4D2G3 310 aa3.95□□□□□ -1.78
HMGB1P17-201ENST00000403495 AKR1B15C9JRZ8 316 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P17-201ENST00000403495 ZIC3O60481 467 aa3.95□□□□□ -1.78
HMGB1P17-201ENST00000403495 MTA2O94776 668 aa3.95□□□□□ -1.78
HMGB1P17-201ENST00000403495 SYF2O95926 243 aaKnown RBP3.95□□□□□ -1.78
HMGB1P17-201ENST00000403495 FGBP02675 491 aa3.95□□□□□ -1.78
HMGB1P17-201ENST00000403495 LCATP04180 440 aa3.95□□□□□ -1.78
HMGB1P17-201ENST00000403495 SRPRAP08240 638 aaKnown RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms